New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	151249 =	45 (0.760)	4 (0.070)	4/248	NT	8.4%	coding (858/1026 nt)	PP_0143	membrane protein
	?	NC_002947	151284 =	44 (0.770)					coding (823/1026 nt)	PP_0143	membrane protein

ATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTCCAGCGAGTCGCCCGGTT  >  NC_002947/151102‑151397                                                                                                                                                      |                                                                                                                                                     atTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAggg                                                                                                                                                     >  2:310353/1‑149 (MQ=255) atTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAggg                                                                                                                                                     >  2:104845/1‑149 (MQ=255)   aggtggcggtgagtaccgaagtaatgaaccgccaaccgggcgactcgctggacgaaattgccgccagccgcatccgcagcagtggcctgtatgcctacaccgccatcaacgcgccacgcggcctgaacgagcggatctaccacgtgtgg                                                                                                                                                     >  2:63872‑M1/148‑149 (MQ=255)      ccaccTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATg                                                                                                                                                <  3:334888/149‑1 (MQ=255)       caccTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGc                                                                                                                                               >  5:380941/1‑149 (MQ=255)             gAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTc                                                                                                                                           <  3:198781/147‑1 (MQ=255)                 cGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTCCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACctc                                                                                                                                     <  1:310353/149‑1 (MQ=255)                        cGCCGATCACTTGCCCCTCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCg                                                                                                                              <  4:60378/149‑1 (MQ=255)                         gCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGGAGCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCg                                                                                                                              >  1:298178/1‑149 (MQ=255)                           cGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTcc                                                                                                                           <  1:104845/149‑1 (MQ=255)                             aaccgccaaccgggcgactcgctggacgaaattgccgccagccgcatccgcagcagtggcctgtatgcctacaccgccatcaacgcgccacgcggcctgaacgagcggatctaccacgtgtGGCAATGCGGTCGACCTCTTGGCCGTcc                                                                                                                           <  6:74719‑M1/28‑1 (MQ=255)                                      ccATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCacac                                                                                                                >  1:133784/1‑149 (MQ=255)                                       cgggcgactcgctggacgaaattgccgccagccgcatccgcagcagtggcctgtatgcctacaccgccatcaacgcgccacgcggcctgaacgagcggatctaccacgtgtGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCcaca                                                                                                                 >  5:74719‑M1/112‑149 (MQ=255)                                        aTCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCcacatca                                                                                                              >  8:180136/1‑146 (MQ=255)                                           cTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTgg                                                                                                            <  5:176342/148‑1 (MQ=255)                                            tCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTgg                                                                                                            >  1:305427/1‑147 (MQ=255)                                              ggTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAg                                                                                                         <  5:99246/148‑1 (MQ=255)                                                  aGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCg                                                                                                    <  3:349302/149‑1 (MQ=255)                                                    cACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCt                                                                                                  <  6:380941/149‑1 (MQ=255)                                                     aCCCTCACCTGCCACTTGCCTACCGGGGTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTc                                                                                                 <  2:133784/149‑1 (MQ=255)                                                       ccTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGc                                                                                                                     <  1:361632/127‑1 (MQ=255)                                                       ccTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGc                                                                                                                     >  2:361632/1‑127 (MQ=255)                                                                  aCTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGt                                                                                                           >  8:360919/1‑126 (MQ=255)                                                                  aCTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGt                                                                                                           <  7:360919/126‑1 (MQ=255)                                                                         tACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCtt                                                                                                                                   >  2:364815/1‑95 (MQ=255)                                                                         tACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCtt                                                                                                                                   <  1:364815/95‑1 (MQ=255)                                                                             gggTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGAt                                                                         >  6:67835/1‑149 (MQ=255)                                                                              ggTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTc                                                                                                                            <  3:316963/97‑1 (MQ=255)                                                                              ggTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTc                                                                                                                            >  4:316963/1‑97 (MQ=255)                                                                               gTTGG‑GCGGGAAGTTCTGCTTGTGGGTCGCAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTc                                                                                                 >  1:23314/1‑124 (MQ=255)                                                                               gTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTc                                                                                                 <  2:23314/123‑1 (MQ=255)                                                                                  gg‑gCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCg                                                                     <  5:32538/148‑1 (MQ=255)                                                                                      cGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCTCGTGGCGCGTTGATGGCGgtg                                                                  >  5:292972/1‑148 (MQ=255)                                                                                       gcctgtatgcctacaccgccatcaacgcgccacgcggcctgaacgagcggatctaccacgtatGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTg                                                                                                             <  5:306662‑M1/42‑1 (MQ=255)                                                                                       gcctgtatgcctacaccgccatcaacgcgccacgcggcctgaacgagcggatctaccacgtatGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTg                                                                                                             >  6:306662‑M1/64‑105 (MQ=255)                                                                                        ggAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCGGCCGTGGATGTCCAGGGCAATGCGTGCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAg                                                               <  1:273927/149‑1 (MQ=255)                                                                                         gAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAgg                                                              <  2:298178/149‑1 (MQ=255)                                                                                            gTTCTTCTTGTGGGTC‑CAGGCACGATAGCCTTACTTGCGCCCGCCGTGGATGTCCAGGGCAATGCTGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCAt                                                           <  6:385420/149‑1 (MQ=255)                                                                                                  cTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAg                                                       <  3:280435/147‑1 (MQ=255)                                                                                                         gTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCg                                                                     >  1:165745/1‑126 (MQ=255)                                                                                                         gTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCg                                                                     <  2:165745/126‑1 (MQ=255)                                                                                                         gTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCActgct                                              >  6:371016/1‑149 (MQ=255)                                                                                                              aGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCg                                           >  3:167163/1‑148 (MQ=255)                                                                                                                gCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGAt                                        >  5:369182/1‑149 (MQ=255)                                                                                                                   cGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCg                                     <  5:67835/149‑1 (MQ=255)                                                                                                                           ttccttGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTggcgg                             >  6:130186/1‑149 (MQ=255)                                                                                                                                   gcccgccGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGATCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCg                     >  4:264113/1‑149 (MQ=255)                                                                                                                                     ccgccgTGGATGTCCGGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTc                   >  6:384388/1‑149 (MQ=255)                                                                                                                                     ccgccgTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTc                   >  2:259125/1‑149 (MQ=255)                                                                                                                                     ccgccgTGGATGTCCAGGGCAATGCGGGCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTc                   <  1:259125/149‑1 (MQ=255)                                                                                                                                         cgTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTCCAGc               <  5:130186/149‑1 (MQ=255)                                                                                                                                            ggATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTCCAGCGAg            >  8:61376/1‑149 (MQ=255)                                                                                                                                                  ccAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTCCAGCGAGTCGccc      >  3:81521/1‑149 (MQ=255)                                                                                                                                                   cAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTCCAGCGAGTCGCCCg     >  7:129336/1‑149 (MQ=255)                                                                                                                                                   cAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTCCAGCGAGTCGCCCg     >  3:258193/1‑149 (MQ=255)                                                                                                                                                      GGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTCCAGCGAGTCGCCCGGtt  <  7:267085‑M1/149‑1 (MQ=255)                                                                                                                                                      GGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTCCAGCGAGTCGCCCGGtt  <  2:4917‑M1/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     ATTGACCACCTTGAACCGCAGCACGCCGATCACTTGCCCATCCTCGGTCAGCACCCTCACCTGCCACTTGCCTACCGGGTTGG‑GCGGGAAGTTCTGCTTGTGGGTC‑CAGGCACGATAGCCTTCCTTGCGCCCGCCGTGGATGTCCAGGGCAATGCGGTCGACCTCTTGGCCGTCCTTCTGCCACACGTGGTAGATCCGCTCGTTCAGGCCGCGTGGCGCGTTGATGGCGGTGTAGGCATACAGGCCACTGCTGCGGATGCGGCTGGCGGCAATTTCGTCCAGCGAGTCGCCCGGTT  >  NC_002947/151102‑151397

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.