New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 499202	47 (0.800)	9 (0.160)	4/238	NT	16.0%	intergenic (+46/‑250)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
	?	NC_002947	= 499271	51 (0.930)					intergenic (+115/‑181)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein

GAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCAGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATC  >  NC_002947/499054‑499349                                                                                                                                                     |                                                                                                                                                     gAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGC                                                                                                                                                      >  1:191781‑M1/1‑149 (MQ=255)   gCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgg                                                                                                                                                    >  6:124720‑M1/1‑147 (MQ=255)    cAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGATCggg                                                                                                                                                   >  7:161957‑M1/1‑146 (MQ=255)    cAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCggg                                                                                                                                                   <  3:197818‑M1/149‑4 (MQ=255)     aaGACCCTCCGCACCCACAAGGCACGCCTGATGCAGAAGTTGCAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGGGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgggc                                                                                                                                                  <  8:161957‑M1/149‑5 (MQ=255)               gCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCGGAAACTTGCCGAAGCCTATGTGGGAGCgggcatgcccgcg                                                                                                                                         >  4:242133‑M1/1‑135 (MQ=255)               gCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgggcatgcccgcg                                                                                                                                         >  6:149596‑M1/1‑135 (MQ=255)               gCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgggcatgcccgcg                                                                                                                                         >  8:214450‑M1/1‑135 (MQ=255)                 aCCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgggcatgcccgctccc                                                                                                                                      <  1:344456‑M1/149‑17 (MQ=255)                 aCCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgggcatgcccgcgaac                                                                                                                                      <  3:86299‑M1/149‑17 (MQ=255)                   ccACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgggcatgcccgcgaacgg                                                                                                                                    <  3:362934‑M1/149‑19 (MQ=255)                         ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGGAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGggcctgg                                                                                                                             >  6:387070/1‑149 (MQ=255)                              gCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCctgc                                                                                                                        <  5:124720/149‑1 (MQ=255)                                 tGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGgcctggcctg                                                                                                                         <  5:121432/145‑1 (MQ=255)                                 tGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGgcctggcctg                                                                                                                         >  6:121432/1‑145 (MQ=255)                                  gATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTTGCCTGCTGAt                                                                                                                    >  8:206109/1‑149 (MQ=255)                                  gATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGa                                                                                                                     >  6:382441/1‑148 (MQ=255)                                  gATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGa                                                                                                                     <  5:382441/148‑1 (MQ=255)                                   aTGCAGAAGTTTAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGAt                                                                                                                    <  5:227709/148‑1 (MQ=255)                                    tGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGAtct                                                                                                                  <  1:309496/149‑1 (MQ=255)                                      cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGACGCCTATGTGGGAGCGGGCATGCCCGCGC‑ACGGGCCTGGGcggctgggggcg                                                                                                                >  4:254631/1‑143 (MQ=255)                                        gAAGTTGAAAGTGCACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTAt                                                                                                              <  2:280544/149‑1 (MQ=255)                                          aGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATgg                                                                                                            <  5:243729/149‑1 (MQ=255)                                                   tGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgggc                                                                                                                                                  >  8:351890‑M1/1‑99 (MQ=255)                                                   tGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgggc                                                                                                                                                  <  7:351890‑M1/103‑5 (MQ=255)                                                     aaCTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGcc                                                                                                 >  2:19457/1‑149 (MQ=255)                                                             ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgggcatgcccgcgaagaggccggctcagccatagagatcagcaggccaggcccgttcgcg                                                                                          <  2:328635‑M1/149‑61 (MQ=255)                                                              gcgcAGCTGGGTAATTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                        <  2:191781/149‑1 (MQ=255)                                                               cGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgggcatgcccgcgaagaggccggctcagccatagagatcagcaggccaggcccgttcgcggg                                                                                        <  8:137631‑M1/149‑63 (MQ=255)                                                                  aGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCgggcatgcccgcgaagaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcat                                                                                     <  7:214450‑M1/149‑66 (MQ=255)                                                                  aGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCAt                                                                                    <  3:254631/149‑1 (MQ=255)                                                                    cTGGTGGAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGc                                                                                  <  5:387070/149‑1 (MQ=255)                                                                    cTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGc                                                                                  <  5:149596/149‑1 (MQ=255)                                                                     tGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATATCAATGGCTGAGCCGGCCTCTTCGCGGGCATGcc                                                                                 >  5:364916/1‑149 (MQ=255)                                                                       gTGAAGTACGCCATGGAGCACAAGCTGATCTAATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑AAGGGCCTGGCCTGCTGATCTCTATGGCTGAGGCGGCCTCTTAGCGGGCATGGCCg                                                                               <  1:33778‑M2/149‑2 (MQ=255)                                                                            gTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGggc                                                                                                                                 <  8:362613/94‑1 (MQ=255)                                                                            gTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGggc                                                                                                                                 >  7:362613/1‑94 (MQ=255)                                                                                  cATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATTCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGGCTCTTCGCGGGCATGCCCGCTACCCCAGGt                                                                    >  6:177363/1‑149 (MQ=255)                                                                                  cATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                        <  3:124709/129‑1 (MQ=255)                                                                                  cATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                        >  4:124709/1‑129 (MQ=255)                                                                                  cATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCAGGCCTGCTGATCTCTATGGCTGAGACGGCCTCTTCGCGGGCATGGCCGCTCCCACAggg                                                                    >  6:171861/1‑148 (MQ=255)                                                                                    tGGAGCACAAGCTGATCTGATTGCGACATACGGGGCCCCGAAACTTGCCGAACCCTATGTGGCAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCGGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGttt                                                                  <  2:244404/149‑1 (MQ=39)                                                                                     ggAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCCTGCCCCCGA‑ACGGGCCGGGGCGGGGGGTCTCGATGGGGGAGCCCGCCGATTAGCGGGCATGCCCGCGGCCCCAGGgttg                                                                 >  4:264152/1‑148 (MQ=255)                                                                                         cacaAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTTAGCCGGCCTCTTCGCGGGCATGCCCCCTCCCACAGGTTTCGTgg                                                             >  7:345179/1‑149 (MQ=255)                                                                                                  atctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATTCCCGCGA‑ACGGGCCTGGCCGGGTGATATATATTGGTGAGCCGGGCTCTTAGCGGGCATGCCCGCGCCCACAGGTTTAGTGGGTTGCTCg                                                     >  2:123806/1‑148 (MQ=255)                                                                                                  atctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCAAGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCGGCGCCGGCCTCTTAGCGGGCCTGGCCGCTCCCACAGGTTTCGTGGCTGGGTCg                                                     >  5:85873/1‑148 (MQ=255)                                                                                                      tatTGAGACATCCGGGTGCCGTAAACTTGCCTATTCTTTTGTGGGAGGGGGCATGCCCGCTA‑AGGGGCCTGTCGTGCTGATCTCTATGGCTTAGCCGGCCTCTTCGCGGTCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAg                                                 <  8:345179/147‑1 (MQ=255)                                                                                                            gACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                        <  7:164197/103‑1 (MQ=255)                                                                                                            gACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                        >  8:164197/1‑103 (MQ=255)                                                                                                                    ggTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATTCCCGCGAGACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATccc                                   >  1:279496/1‑149 (MQ=255)                                                                                                                         ccGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGC‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCACTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTACAATCCCGCCCTc                             >  5:180733/1‑149 (MQ=39)                                                                                                                          cGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATcc                            <  1:19457/149‑1 (MQ=255)                                                                                                                          cGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATcc                            >  5:181525/1‑149 (MQ=255)                                                                                                                           gAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTTGCGTGCTTATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATTCCCGGTCCCCCAGGTTTGGTGGTTGGGTAGCAAGGGCATTACCATCCCGCCATGCt                           >  2:41538/1‑149 (MQ=255)                                                                                                                              aCTTGCCTAAGCCTCTGTGGGTGCGGGCAGGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTGTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGt                        <  6:180733/149‑1 (MQ=38)                                                                                                                               cTTCCCGAACCCTATGTGGGAGCGGGAATGCCCGCGA‑ACGGGCCGGGCCTGCTGATCTCTATGGCTGAGCCGTCGTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTa                       <  8:81873/149‑1 (MQ=38)                                                                                                                                   ccGAAGCCTATGTGGGAGCGGGCTTGCCCGCGA‑ACGGGCCTGGCCTGGTGTTCTCTTTGGCTGCGCCGGCCTCTTCGGGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAggg                    <  3:283020/148‑1 (MQ=255)                                                                                                                                    cGAAGCCTATGTGGGAGCGGGCAAGCCCGCGA‑ACCGGCCAGGGCGGCTGATGTATATGGCGGAGCCGCCCTCTTCGCGGGCAAGCCCCCTCCCACAGGTTTCGGTGTTGGCTCGCAAAGGCAATACAATACCGCCATACATGTAggg                    >  4:283020/1‑147 (MQ=255)                                                                                                                                       cgCCTATGTGGGAGGGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTCATCTCTATGGCTGACCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCACTCCCGCCATCCTTGTAGGGCGATc               <  7:206109/148‑1 (MQ=39)                                                                                                                                       aGCCTATGGGGCAGCGGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTCAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATc               <  5:75906/149‑1 (MQ=255)                                                                                                                                         ccTATGGGGGCCCGGGCAGGCCCGCGA‑ACGGGCCTGGCCGGCTGAGCTCTATGGCTGCGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATccc             <  3:264152/149‑1 (MQ=38)                                                                                                                                         catttgtgGGAGCGGGCATGCCCGCTA‑ACGGGCCTGGCCTGCTTATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATccc             <  6:364916/145‑1 (MQ=255)                                                                                                                                           aaTGTGGGAGCGGGCATGCCCGCGA‑ACGGGCCTCGCCTGCTTATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTa           <  5:177363/148‑1 (MQ=255)                                                                                                                                             ggggggAGCGGGCATTCCCGCGA‑CCGGGCCTGGCCTGCTCATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTa           <  5:171861/144‑1 (MQ=39)                                                                                                                                                     cggccatgcccgctaagaggccgcctcagccatagagatcagcaggccaggccctttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaattagatcagcttgtgctccatggcgtacttcac  <  1:33778‑M1/149‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GAGCAAGACCATCAGCACCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCAGGCATGCCCGCGA‑ACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATC  >  NC_002947/499054‑499349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.