New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 905387 =58 (0.980)3 (0.050) 3/238 NT 5.3% coding (1646/2160 nt) PP_0788 hypothetical protein
?NC_002947 905425 = 53 (0.960)coding (1684/2160 nt) PP_0788 hypothetical protein

GCAGGCCTGGAGCCAGGTACTGCTGTTGGCTTGGCTGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAGGGCCAATCC  >  NC_002947/905244‑905535
                                                                                                                                                    |                                                                                                                                                    
tcagcacaatctcttgttctaccagcacatcgcccaaggattggccctccccgctcggcagcgcctctttacctgcgcaggcgcgcaggtgcaactgttccagttgcaggaagaactcgcgggtcgccaccgcgtccagagctacgctt                                                                                                                                                      <  7:314472‑M1/1‑1 (MQ=255)
  agcacaatctcttgttctaccagcacatcgcccaaggattggccctccccgctcggcagcgcctctttacctgcgcaggcgcgcaggtgcaactgttccagttgcaggaagaactcgcgggtcgccaccgcgtccagagctacgctTGc                                                                                                                                                    >  8:345993‑M1/147‑149 (MQ=255)
  aGGCCTGGAGCCAGGTACTGCTGTTGGCTTGGCTGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCAGATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGc                                                                                                                                               <  8:175537/149‑1 (MQ=255)
    cacaatctcttgttctaccagcacatcgcccaaggattggccctccccgctcggcagcgcctctttacctgcgcaggcgcgcaggtgcaactgttccagttgcaggaagaactcgcgggtcgccaccgcgtccagagctacgctTGc                                                                                                                                                    <  8:152876‑M1/3‑1 (MQ=255)
    cacaatctcttgttctaccagcacatcgcccaaggattggccctccccgctcggcagcgcctctttacctgcgcaggcgcgcaggtgcaactgttccagttgcaggaagaactcgcgggtcgccaccgcgtccagagctacgctTGc                                                                                                                                                    <  4:2053‑M1/3‑1 (MQ=255)
    cacaatctcttgttctaccagcacatcgcccaaggattggccctccccgctcggcagcgcctctttacctgcgcaggcgcgcaggtgcaactgttccagttgcaggaagaactcgcgggtcgccaccgcgtccagagctacgctTGc                                                                                                                                                    <  7:120956‑M1/3‑1 (MQ=255)
      caatctcttgttctaccagcacatcgcccaaggattggccctccccgctcggcagcgcctctttacctgcgcaggcgcgcaggtgcaactgttccagttgcaggaagaactcgcgggtcgccaccgcgtccagagctacgctTGCCAgg                                                                                                                                                >  8:101000‑M1/143‑149 (MQ=255)
          aGCCAGGTACTGCTGTTGGCTTGGCTGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCaa                                                                                                                                       <  5:167525/149‑1 (MQ=255)
            ccAGGTACTGCTGTTGGCTTGGCTGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAgg                                                                                                                                     <  3:354190/149‑1 (MQ=255)
                    tgctgTTGGCTTGGCTGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTgcgc                                                                                                                             >  1:350275/1‑149 (MQ=255)
                       tgTTGGCTTGGCTGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGCATTTCGCCACATCACCCTCGCCCAAATGACCCGCAACCATTGGGGCCGCCTGTGCCAGGCCGGCAAAAGGCGCTgcg                                                                                                                              >  1:308133/1‑149 (MQ=255)
                         ttggcttggcTGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATg                                                                                                                         <  4:273346/148‑1 (MQ=255)
                           ggcttggctGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTTCCAGGCCTGCTCAAGGCGCTGCGCGATGGc                                                                                                                       <  1:225943/148‑1 (MQ=255)
                              ttggctGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTgg                                                                                                                   >  6:202382/1‑149 (MQ=255)
                                 gctGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGc                                                                                                                  >  7:15519/1‑147 (MQ=255)
                                   tGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGc                                                                                                              >  2:106813/1‑149 (MQ=255)
                                   tGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCAGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGc                                                                                                              >  8:75379/1‑149 (MQ=255)
                                   tGAAACAGGGAGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGc                                                                                                              >  2:358217/1‑149 (MQ=255)
                                    gAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCg                                                                                                             >  2:67384/1‑149 (MQ=255)
                                     aaaCAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGc                                                                                                              <  5:202382/147‑1 (MQ=255)
                                         aGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCACGATGGCCTGGCAAGCGTAGct                                                                                                        <  6:371895/149‑1 (MQ=255)
                                           ggCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGctct                                                                                                      <  5:315476/149‑1 (MQ=255)
                                            gCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTg                                                                                                     <  6:214407/149‑1 (MQ=255)
                                                      acaGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTgg                                                                                           <  2:308133/149‑1 (MQ=255)
                                                      acaGGCCTGGCGCGACGCAGGGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTgg                                                                                           <  6:116058/149‑1 (MQ=255)
                                                              gcctctttacctgcgcaggcgcgcaggtgcaactgttccagttgcaggaagaactcgcgggtcgccaccgcgtccagagctacgctTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCa                                                                                                                 >  8:2411‑M1/87‑124 (MQ=255)
                                                                       cAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGttcttc                                                                          <  4:313305/149‑1 (MQ=255)
                                                                           gCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTg                                                                       >  5:380147/1‑148 (MQ=255)
                                                                            cAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCcgc                                                                                   <  1:238869/135‑1 (MQ=255)
                                                                            cAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCcgc                                                                                   >  2:238869/1‑135 (MQ=255)
                                                                              aggcgcgcaggtgcaactgttccagttgcaggaagaactcgcgggtcgccaccgcgtccagagctacgctTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAg                                                                                                               <  7:201522‑M1/40‑1 (MQ=255)
                                                                              aggcgcgcaggtgcaactgttccagttgcaggaagaactcgcgggtcgccaccgcgtccagagctacgctTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAg                                                                                                               >  8:201522‑M1/71‑110 (MQ=255)
                                                                               aCGATGGACATGCTGC‑‑‑TGGCCAGCATGACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACt                                                                  <  8:181274/149‑1 (MQ=255)
                                                                               aCGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACt                                                                  <  5:308429/149‑1 (MQ=255)
                                                                                  aTGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTcc                                                                         <  7:145417/139‑1 (MQ=255)
                                                                                  aTGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTcc                                                                         >  8:145417/1‑139 (MQ=255)
                                                                                      aCATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAg                                                           >  1:71766/1‑149 (MQ=255)
                                                                                        aTGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGtt                                                         <  7:75379/149‑1 (MQ=255)
                                                                                        aTGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGtt                                                         <  2:256941/149‑1 (MQ=255)
                                                                                        aTGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGtt                                                         >  8:164026/1‑149 (MQ=255)
                                                                                           ctgc‑‑‑tgGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCa                                                      >  8:169865/1‑149 (MQ=255)
                                                                                              c‑‑‑tgGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCAcc                                                    <  1:106813/148‑1 (MQ=255)
                                                                                              c‑‑‑tgGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCAc                                                     <  1:358217/147‑1 (MQ=255)
                                                                                                     ccAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTgcgc                                               >  6:158130/1‑149 (MQ=255)
                                                                                                      cAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGt                                                                                                            <  2:9735/87‑1 (MQ=255)
                                                                                                      cAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGt                                                                                                            >  1:9735/1‑87 (MQ=255)
                                                                                                      cAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTgcgcg                                              >  3:375277/1‑149 (MQ=255)
                                                                                                          aTCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTg                                          >  7:192840/1‑149 (MQ=255)
                                                                                                            cACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTgcg                                        >  3:93319/1‑149 (MQ=255)
                                                                                                             aCCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTgcgc                                       <  2:350275/149‑1 (MQ=255)
                                                                                                             aCCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTgcgc                                       <  5:158130/149‑1 (MQ=255)
                                                                                                                  cGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAgg                                    >  6:367910/1‑148 (MQ=255)
                                                                                                                      cacaTGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTa                                  >  1:14674/1‑147 (MQ=255)
                                                                                                                         aTGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAagag                             <  5:310501/149‑1 (MQ=255)
                                                                                                                           gAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGgc                           >  1:338802/1‑149 (MQ=255)
                                                                                                                                gCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGc                      >  6:16526/1‑149 (MQ=255)
                                                                                                                                  aaGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGcc                     >  3:347388/1‑148 (MQ=255)
                                                                                                                                    gCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAg                  >  3:2053/1‑149 (MQ=255)
                                                                                                                                      cTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCg                >  4:146133/1‑149 (MQ=255)
                                                                                                                                         gctgcAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCggg              <  8:15519/148‑1 (MQ=255)
                                                                                                                                         gctgcAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCgg               <  7:169865/147‑1 (MQ=255)
                                                                                                                                          ctgcAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCggg              >  4:272340/1‑147 (MQ=255)
                                                                                                                                           tgcAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAg           >  7:152876/1‑149 (MQ=255)
                                                                                                                                            gcagcaGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAgg          >  1:301007/1‑149 (MQ=255)
                                                                                                                                            gcagcaGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAgg          >  3:275070/1‑149 (MQ=255)
                                                                                                                                             cagcagGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAgg          <  6:380147/148‑1 (MQ=255)
                                                                                                                                              agcagGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGGGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAGGGc        <  7:164026/149‑1 (MQ=255)
                                                                                                                                                cagGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCg                <  8:118210/139‑1 (MQ=255)
                                                                                                                                                cagGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCg                >  7:118210/1‑139 (MQ=255)
                                                                                                                                                   gTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAGGGCCAATc   >  6:254980/1‑149 (MQ=255)
                                                                                                                                                   gTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAGGGCCAATc   >  8:120956/1‑149 (MQ=255)
                                                                                                                                                    TGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAGGGCCAATcc  >  4:375277‑M1/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCAGGCCTGGAGCCAGGTACTGCTGTTGGCTTGGCTGAAACAGGGCGAGGCCTCACAGGCCTGGCGCGACGCAGTGCAGACGATGGACATGCTGC‑‑‑TGGCCAGCATCACCCCGCCACATGAGCCGCAAGCCTTGCTGCAGCAGGTGCCAGGCCTGCTCAAGGCGCTGCGCGATGGCCTGGCAAGCGTAGCTCTGGACGCGGTGGCGACCCGCGAGTTCTTCCTGCAACTGGAACAGTTGCACCTGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAGGGCCAATCC  >  NC_002947/905244‑905535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.