New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 995360 = | 52 (0.880) | 4 (0.070) | 4/244 | NT | 6.9% | coding (2236/2550 nt) | PP_0860 | sulfite reductase flavoprotein subunit |
? | NC_002947 | 995411 = | 59 (1.050) | coding (2185/2550 nt) | PP_0860 | sulfite reductase flavoprotein subunit |
CCAGCATCACGTCCTGCACATACACCTTCCCGGCCTGATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGCCACTGTTACGCCGCAGGCGCAGGCTCA > NC_002947/995216‑995506 | gcttgggctctggctggctgactgaatacctgccaatgaatggcaccctgagcctgcgcctgcggcgtaacagtggcttccatctgcctgaggctgctgcgccgatgatcctgatcggcaacggcactggcctggcgggccttcGc > 5:89508‑M1/145‑146 (MQ=255) gcttgggctctggctggctgactgaatacctgccaatgaatggcaccctgagcctgcgcctgcggcgtaacagtggcttccatctgcctgaggctgctgcgccgatgatcctgatcggcaacggcactggcctggcgggccttcGc < 6:89508‑M1/2‑1 (MQ=255) gcttgggctctggctggctgactgaatacctgccaatgaatggcaccctgagcctgcgcctgcggcgtaacaggggcttccatctgcctgaggctgctgcgccgatgatcctgatcggcaacggcactggcctggcgggccttcGCAGc > 5:288149‑M1/145‑149 (MQ=255) cAGCATCACGTCCTGCACATACACCTTCCCGGCCTGATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGcc > 2:238515/1‑149 (MQ=255) aTCACGTCCTGCACATACACCTTCCCGGCCTGATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGtt < 6:249136/149‑1 (MQ=255) cACGTCCTGCACATACACCTTCCCGGCCTGATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCATGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTgc > 5:327490/1‑149 (MQ=255) cGTCCTGCACATACACCTTCCCGGCCTGATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTgcgc > 3:204425/1‑149 (MQ=255) acacCTTCCCGGCCTGATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGc > 8:124305/1‑148 (MQ=255) acCTTCCCGGCCTGATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCAc > 6:239866/1‑142 (MQ=255) acCTTCCCGGCCTGATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCAc < 5:239866/142‑1 (MQ=255) ccTTCCCGGCCTGATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCAtt > 8:27908/1‑148 (MQ=255) ctgccaatgaatggcaccctgagcctgcgcctgcggcgtaacagtggcttccatctgcctgaggctgctgcgccgatgatcctgatcggcaacggcactggcctggcgggccttcGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCg < 5:242353‑M1/34‑1 (MQ=255) tGATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGgcgc > 1:223396/1‑148 (MQ=255) gATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGgcgcg > 3:335092/1‑148 (MQ=255) aTCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGgcgcgc > 8:253815/1‑148 (MQ=255) aTCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGgcgc < 2:223396/146‑1 (MQ=255) aTCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCAGCTCACCGGCATTGACCCGGgcgcgc < 3:315672/148‑1 (MQ=255) tCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCaa < 4:204425/149‑1 (MQ=255) tggcaccctgagcctgcgcctgcggcgtaacagtggcttccatctgcctgaggctgctgcgccgatgatcctgatcggcaacggcactggcctggcgggccttcGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACa > 4:25906‑M1/105‑149 (MQ=255) gcgcgAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACa < 4:335092/149‑1 (MQ=255) gcgAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAgg > 8:28991/1‑149 (MQ=255) accctgagcctgcgcctgcggcgtaacagtggcttccatctgcctgaggctgctgcgccgatgatcctgatcggcaacggcactggcctggcgggccttcGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCt > 6:242353‑M1/101‑149 (MQ=255) gaACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCACCAAGATGAGCTCCTCACCGGCATTGACCCCGCCGCCCAACAGGATGc > 5:249578/1‑149 (MQ=255) ggTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGccc < 6:45963/149‑1 (MQ=255) gTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCTATTACGCTCACCGAACAGCAGCCAGTGGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCgccaggcca < 2:153392/149‑1 (MQ=255) gTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCgccaggcca < 3:337500/149‑1 (MQ=255) tCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGtt < 7:28991/149‑1 (MQ=255) tCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCGCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGtt < 7:200154/149‑1 (MQ=255) ccGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGcc < 4:302253/149‑1 (MQ=255) gTCCAGCCAAGCTTGCAGGTCATCGCCACACAGCACGTCATGCGCCCGTTTCCGCTCCCCCAACAGCAGCCTGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACTGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATc < 7:124305/148‑1 (MQ=255) atctgcctgaggctgctgcgcagatgatcctgatcggcaacggcactggcctggcgggccttcGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAgg < 2:350994‑M1/47‑1 (MQ=255) aGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGa > 7:52729/1‑148 (MQ=255) gCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGat > 6:93145/1‑148 (MQ=255) gCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGat > 2:14972/1‑148 (MQ=255) cTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGgc < 1:14972/149‑1 (MQ=255) tCATCGCCACACAGCAAGTAATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCagcagc > 8:293735/1‑149 (MQ=255) aTCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAgg > 4:232199/1‑100 (MQ=255) aTCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAgg < 3:232199/100‑1 (MQ=255) tCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCt > 3:368927/1‑148 (MQ=255) aaGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGaa < 7:27908/149‑1 (MQ=255) gTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGc < 4:368927/149‑1 (MQ=255) tCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAAGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGc > 4:130388/1‑148 (MQ=255) cATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGtt > 7:332718/1‑103 (MQ=255) cATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGtt < 8:332718/103‑1 (MQ=255) aTGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGCCAc > 2:271794/1‑149 (MQ=255) aTGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGCCAc > 8:172163/1‑149 (MQ=255) gcgcCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGCCACTg > 4:143891/1‑149 (MQ=255) cgcCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGAt > 5:15944/1‑137 (MQ=255) cgcCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGAt < 6:15944/137‑1 (MQ=255) gcCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGc > 1:287682/1‑142 (MQ=255) gcCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGc < 2:287682/142‑1 (MQ=255) ccGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGCCACTGTTAc > 3:140579/1‑149 (MQ=255) gATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATg > 4:368861/1‑133 (MQ=255) gATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATg < 3:368861/133‑1 (MQ=255) tACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGCCACTGTTAcgccg > 8:148489/1‑148 (MQ=255) gCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGAt > 4:280097/1‑126 (MQ=255) gCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGAt < 3:280097/126‑1 (MQ=255) gCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGCCACTGTTACGCcgcagg > 7:271664/1‑149 (MQ=255) aCCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGCCACTGTTACGCcgcaggcg > 3:69020/1‑147 (MQ=255) gAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGCCACTGTTACGCCgcaggcgcaggc > 5:4116/1‑149 (MQ=255) cagcagCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGCCACTGTTACGCCGCAGGCGCAGGCTCa < 3:143891/149‑1 (MQ=255) | CCAGCATCACGTCCTGCACATACACCTTCCCGGCCTGATCGCGCGAGAACGCCAGGTCCAACCGTGCCAGGTCGCCGTTGTCCAGCCAAGCTTGCAGCTCATCGCCACACAGCAAGTCATGCGCCCGATTACGCTCACCGAACAGCAGCCAGTTGCGCTGCTCACCGGCATTGACCCGGGCGCGCAACAGGCTGCGAAGGCCCGCCAGGCCAGTGCCGTTGCCGATCAGGATCATCGGCGCAGCAGCCTCAGGCAGATGGAAGCCACTGTTACGCCGCAGGCGCAGGCTCA > NC_002947/995216‑995506 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |