| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1642047 = | 53 (0.900) | 3 (0.050) | 3/248 | NT | 5.6% | coding (126/393 nt) | PP_1442 | hypothetical protein |
| ? | NC_002947 | 1642092 = | 49 (0.860) | coding (81/393 nt) | PP_1442 | hypothetical protein | |||||
GATAGGCCCGAGCTGCCGACGATACCGGTGTCTTCAGGCGCGCTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGC > NC_002947/1641901‑1642191 | acaggcagcacaaatttcctcgatcatcgggtatcctcaggccatcgccagccttcggagccaccatgacctctcctcgtctgctcgttcccctgagcttcgccctgctttctgcttgcgcgcaacaatcctcgcagcccgttgacCTg > 7:282757‑M1/147‑149 (MQ=255)acaggcagcacaaatttcctcgatcatcgggtatcctcaggccatcgccagccttcggagccaccatgacctctcctcgtctgctcgttcccctgagcttcgccctgctttctgcttgcgcgcaacaatcctcgcagcccgttgacCTg < 8:282757‑M1/3‑1 (MQ=255) ccGAGCTGCCGACGATACCGGTGTCTTCAGGCGCGCTGTAAACCTCGCGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCCGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGAcc > 5:252074/1‑149 (MQ=255) gCCGACGATACCGGTGTCTTCAGGCGCGCTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGgc > 1:141986/1‑149 (MQ=255) cgaTACCGGTGTCTTCAGGCGCGCTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTg < 6:124690/149‑1 (MQ=255) gaTACCGGTGTCTTCAGGCGCGCTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTgg > 8:51136/1‑149 (MQ=255) ttACCGGTGTCTTCAGGCGCGCTGTAATCCTCGGGGCCTAGGCTTTGCAATACGTTGGGCGGCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTggg < 6:252074/148‑1 (MQ=255) aTACCGGTGTCTTCAGGCGCGCTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTggg < 3:169422/149‑1 (MQ=255) tACCGGTGTCTTCAGGCGCGCTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTggg < 1:188352/148‑1 (MQ=255) tACCGGTGTCTTCAGGCGCGCTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTggg > 2:188352/1‑148 (MQ=255) cGGTGTCTTCAGGCGCGCTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCAt > 2:293675/1‑149 (MQ=255) ttCAGGCGCGCTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTCTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGCCCTGCAGGCGCTTGGGGCATTCGCttt > 6:94713/1‑149 (MQ=255) cgcgcTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGt < 2:141986/149‑1 (MQ=255) cgcTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTcc < 2:316666/149‑1 (MQ=255) cTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAg < 7:51136/149‑1 (MQ=255) tcgccagccttcggagccaccatgacctctcctcgtctgctcgttcccctgagcttcgccctgctttctgcttgcgcgcaacaatcctcgcagcccgttgacCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGt > 3:272843‑M1/103‑149 (MQ=255) aaaCCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTc > 6:199814/1‑148 (MQ=255) tCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACggg > 6:81901/1‑149 (MQ=255) cGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGc > 5:75928/1‑149 (MQ=255) gggCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGGGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTg < 2:315936/149‑1 (MQ=255) ccAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGa < 3:362377/149‑1 (MQ=255) cAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGGGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAg > 1:290625/1‑149 (MQ=255) aaGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTg < 6:173567/99‑1 (MQ=255) aaGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTg > 5:173567/1‑99 (MQ=255) aaGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAg > 8:335635/1‑148 (MQ=255) aGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGa < 6:261135/149‑1 (MQ=255) gCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGAtt < 5:377901/149‑1 (MQ=255) gCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGAttgttg < 1:293675/148‑1 (MQ=255) cAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTgc < 5:199814/148‑1 (MQ=255) acctctcctcgtctgctcgttcccctgagcttcgccctgctttctgcttgcgcgcaacaatcctcgcagcccgttgacCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACgg < 3:329255‑M1/53‑1 (MQ=255) acctctcctcgtctgctcgttcccctgagcttcgccctgctttctgcttgcgcgcaacaatcctcgcagcccgttgacCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACgg > 4:329255‑M1/79‑131 (MQ=255) aaTACGTTGGGCGCCGTGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGGGGGGAGCTGGCCGAGCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTgcgc < 5:371356/149‑1 (MQ=255) aaTACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTgcgc < 8:231621/149‑1 (MQ=255) aTACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGAttgttg > 3:15529/1‑145 (MQ=255) aTACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGAttgttg < 4:15529/145‑1 (MQ=255) gggCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCa < 7:335635/148‑1 (MQ=255) cgcCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGaaa < 6:75928/149‑1 (MQ=255) ttCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGc > 1:170819/1‑149 (MQ=255) tACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGc > 7:188369/1‑149 (MQ=255) agccagcGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAg > 4:13188/1‑149 (MQ=255) gccagcGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAgg < 5:168443/149‑1 (MQ=255) ccagcGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAggg > 5:359253/1‑149 (MQ=255) agcGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAgggg > 3:317427/1‑148 (MQ=255) cGGTAGCCGGTGTTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAAc < 2:290625/149‑1 (MQ=255) cGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGa > 6:229122/1‑149 (MQ=255) ggggTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACgag > 3:366640/1‑146 (MQ=255) gggTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGgaga < 6:359253/149‑1 (MQ=255) gCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTc < 5:229122/148‑1 (MQ=255) gCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTc < 4:366640/148‑1 (MQ=255) cTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCAt > 4:165874/1‑149 (MQ=255) gggCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCAtgg > 1:209697/1‑149 (MQ=255) ggTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGa > 6:243872/1‑122 (MQ=255) ggTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGa < 5:243872/122‑1 (MQ=255) gTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTcc < 2:170819/149‑1 (MQ=255) aGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCg > 5:102504/1‑147 (MQ=255) aGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGaa < 5:94713/149‑1 (MQ=255) cGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGAGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAgg > 8:124688/1‑149 (MQ=255) cGTGACGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTGCAGGTAAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGACAGCTGGGCGAAGCTCAGGGGACAGAGAGGTCGAGGAGAGGTCATGGTGGCTCCGAAgg > 7:348982/1‑149 (MQ=255) ggATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGc > 6:273011/1‑149 (MQ=255) gATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGc > 4:135490/1‑148 (MQ=255) | GATAGGCCCGAGCTGCCGACGATACCGGTGTCTTCAGGCGCGCTGTAAACCTCGGGGCCAAGGCTTTGCAATACGTTGGGCGCCGGGTTCTGTACCAGCCAGCGGTAGCCGGTGGTGGGGTTGCTGGGCAGGGTAAGCGTGAGGATCTGGCCGACCTGCAGGCGCTTGGGGCATTCGCTTTCGGCGTCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGC > NC_002947/1641901‑1642191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |