New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2780527 =64 (1.080)4 (0.070) 4/248 NT 6.2% coding (301/480 nt) PP_2433 hypothetical protein
?NC_002947 2780572 = 59 (1.030)coding (346/480 nt) PP_2433 hypothetical protein

GCCGCCACCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCT  >  NC_002947/2780380‑2780675
                                                                                                                                                    |                                                                                                                                                    
gccgccACCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCgg                                                                                                                                                      <  3:28609/148‑1 (MQ=255)
 ttcgccacaaaatcacaggccatagccctcggcaatctgcagcagcatttcttcgacctgcggggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttcctagggcttggaaagccagcgtttggccttGc                                                                                                                                                     >  5:391291‑M1/148‑149 (MQ=255)
 ccgccACCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGcc                                                                                                                                                    <  6:27295/149‑1 (MQ=255)
 ccgccACCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGcc                                                                                                                                                    >  5:27295/1‑149 (MQ=255)
  tcgccacaaaatcacaggccatagccctcggcaatctgcagcagcatttcttcgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGcc                                                                                                                                                    <  4:265213‑M1/3‑1 (MQ=255)
    ccACCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCca                                                                                                                                                  >  7:121676/1‑148 (MQ=255)
      aCCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACAt                                                                                                                                               >  1:172452/1‑149 (MQ=255)
        cTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCa                                                                                                                                             <  2:172452/149‑1 (MQ=255)
               gtAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCAt                                                                                                                                      >  2:207416/1‑149 (MQ=255)
                tAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATg                                                                                                                                     >  4:17699/1‑149 (MQ=255)
                tAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATg                                                                                                                                     >  4:55476/1‑149 (MQ=255)
                tAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATg                                                                                                                                     >  5:134859/1‑149 (MQ=255)
                 aggccatagccctcggcaatctgcagcagcatttcttcgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGCCCACATCACCGCCATg                                                                                                                                     <  2:102058‑M1/18‑1 (MQ=255)
                        agccctcggcaatctgcagcagcatttcttcgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGc                                                                                                                                                     <  7:27044‑M1/2‑1 (MQ=255)
                        agccctcggcaatctgcagcagcatttcttcgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGc                                                                                                                                                     >  8:27044‑M1/125‑126 (MQ=255)
                         ccGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGcc                                                                                                                            >  6:72578/1‑149 (MQ=255)
                           gAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGAATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACAAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCg                                                                                                                           >  1:254153/1‑149 (MQ=255)
                                cgGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCg                                                                                                                     <  3:55476/149‑1 (MQ=255)
                                          gcagcatttcttcgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCgg                                                                                                            >  1:102058‑M1/107‑149 (MQ=255)
                                          aCGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCg                                                                                                             <  6:232073/147‑1 (MQ=255)
                                           cGCCGGTGGAGCGCGACCAGATCATGCCGGTGCGCACCCTCAAATCCCGTATGGTGCGTGAGCAACCGCTGACCGTGGATGAGAGCGATCGGGTGTTCCTCTCGGCCCAGATATCCGCCTTGGCCGAGGCCGTGTTCTGTGAAGCggg                                                                                                           <  2:233187/148‑1 (MQ=255)
                                            gCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGc                                                                                                          >  4:200690/1‑148 (MQ=255)
                                            gCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGc                                                                                                          >  6:167153/1‑148 (MQ=255)
                                            gCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGc                                                                                                          >  8:153169/1‑148 (MQ=255)
                                             ccGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCaa                                                                                                        <  4:143806/149‑1 (MQ=255)
                                                      cgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAg                                                                                                       >  8:218471‑M1/95‑142 (MQ=255)
                                                      cgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAg                                                                                                       <  7:218471‑M1/48‑1 (MQ=255)
                                                         gACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTg                                                                                            >  5:199979/1‑149 (MQ=255)
                                                          aCCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTgg                                                                                           <  3:17699/149‑1 (MQ=255)
                                                            cAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCt                                                                                         >  4:211055/1‑149 (MQ=255)
                                                              gATCATCCCGCTTCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCttt                                                                                       <  5:167153/149‑1 (MQ=255)
                                                                atcatcCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTc                                                                                      >  1:309229/1‑149 (MQ=255)
                                                                atcatcCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTc                                                                                      <  1:207416/149‑1 (MQ=255)
                                                                   atcCCGCTGCGCACCCTCAAATCTCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCa                                                                                    <  6:231138/148‑1 (MQ=255)
                                                                   atcCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCaa                                                                                   <  7:153169/149‑1 (MQ=255)
                                                                   atcCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCaa                                                                                   <  2:309229/149‑1 (MQ=255)
                                                                    tcCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAg                                                                                  <  8:121676/149‑1 (MQ=255)
                                                                            cgcACCCTCAAATCCCGTATCTAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAg                                                                            <  5:16825/147‑1 (MQ=255)
                                                                               aCCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGATCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACg                                                                       >  6:218537/1‑149 (MQ=255)
                                                                               aCCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGcc                                                                                                                                        >  3:285923/1‑84 (MQ=255)
                                                                               aCCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGcc                                                                                                                                        <  4:285923/84‑1 (MQ=255)
                                                                               aCCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACg                                                                       >  6:296868/1‑149 (MQ=255)
                                                                                  cTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCt                                                                     >  3:26397/1‑148 (MQ=255)
                                                                                   tCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAAc                                                                        <  6:368268/144‑1 (MQ=255)
                                                                                   tCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAAc                                                                        >  5:368268/1‑144 (MQ=255)
                                                                                   tCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTtc                                                                   >  6:357421/1‑149 (MQ=255)
                                                                                     aaaTCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCaaa                                                                                                 <  3:22780/117‑1 (MQ=255)
                                                                                     aaaTCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCaaa                                                                                                 >  4:22780/1‑117 (MQ=255)
                                                                                     aaaTCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTtctc                                                                 <  3:211055/149‑1 (MQ=255)
                                                                                       aTCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCgg                                                               <  3:200690/149‑1 (MQ=255)
                                                                                          ccGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAgg                                                                           <  2:12223/134‑1 (MQ=255)
                                                                                          ccGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAgg                                                                           >  1:12223/1‑134 (MQ=255)
                                                                                          ccGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCgg                                                               >  2:350126/1‑146 (MQ=255)
                                                                                          ccGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCgg                                                               <  1:350126/146‑1 (MQ=255)
                                                                                             tATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGa                                                         >  5:349644/1‑149 (MQ=255)
                                                                                               tCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGAc                                                        <  5:296868/148‑1 (MQ=255)
                                                                                                   gCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAACGAACGCTTCTCGGGGCTGACGCCGa                                                   >  1:276204/1‑149 (MQ=255)
                                                                                                    cGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGAt                                                  <  6:199979/149‑1 (MQ=255)
                                                                                                      tGACCAACCGCTGACCGTGGATGAGAGCCATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGATCGGTGAAGCGGGCAAGGCCAAACGCTCGCTTTCCAAGCCCAAGTAACGCTTCTCGGGGCTGACGCCGATGc                                                <  5:382907/149‑1 (MQ=255)
                                                                                                        aCCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCt                                                           <  8:41992/136‑1 (MQ=255)
                                                                                                        aCCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCt                                                           >  7:41992/1‑136 (MQ=255)
                                                                                                          cAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCg                                                                                                             <  8:233216/84‑1 (MQ=255)
                                                                                                          cAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGAt                                                  >  2:188733/1‑143 (MQ=255)
                                                                                                          cAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGAt                                                  <  1:188733/143‑1 (MQ=255)
                                                                                                           aaCCGCTGATCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATg                                           <  5:218537/149‑1 (MQ=255)
                                                                                                           aaCCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATg                                           <  5:357421/149‑1 (MQ=255)
                                                                                                           aaCCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATg                                           >  3:13518/1‑149 (MQ=255)
                                                                                                                 tGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGc                                                      >  5:125729/1‑132 (MQ=255)
                                                                                                                 tGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGc                                                      <  6:125729/132‑1 (MQ=255)
                                                                                                                     cGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCaccacc                                  >  3:265213/1‑148 (MQ=255)
                                                                                                                          aTGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGGTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCaa                            <  2:254153/149‑1 (MQ=255)
                                                                                                                             agagCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAgg                          <  6:349644/148‑1 (MQ=255)
                                                                                                                                 cGATCGGCTGTTCCGCTCGGCCCACATCATCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGcacca                     >  1:28919/1‑149 (MQ=255)
                                                                                                                                    tCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGc                  >  5:369500/1‑149 (MQ=255)
                                                                                                                                       gCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTc                                        >  2:349980/1‑124 (MQ=255)
                                                                                                                                       gCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTc                                        <  1:349980/124‑1 (MQ=255)
                                                                                                                                                   ggCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAAt     <  6:134859/147‑1 (MQ=255)
                                                                                                                                                    GCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAAtgct  <  8:61058‑M1/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCCGCCACCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCT  >  NC_002947/2780380‑2780675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.