New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2926875 =69 (1.170)4 (0.070) 4/242 NT 6.1% coding (142/2472 nt) PP_2565 UvrD/REP family helicase
?NC_002947 2926914 = 59 (1.060)coding (181/2472 nt) PP_2565 UvrD/REP family helicase

GTGACCGTGGCCCACGAGCAACCCTTGGCCCCCGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAG  >  NC_002947/2926728‑2927015
                                                                                                                                                    |                                                                                                                                            
actcggccgtcaacggcaggcgccagtcgtcgaacaagttgtcatcctggcctggcacagcggcgctgtcggggcgcgtatcgcggatcaccagcacctggcgccccgcttcaaagccctccacccgaccacgctcgaacccttcacgc                                                                                                                                              >  5:7660‑M1/149‑149 (MQ=255)
   aCCGTGGCCCACGAGCAACCCTTGGCCCCCGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGgccacgc                                                                                                                                          >  8:100371/1‑149 (MQ=255)
   aCCGTGGCCCACGAGCAACCCTTGGCCCCCGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGgccacgc                                                                                                                                          >  4:59701/1‑149 (MQ=255)
    ggccgtcaacggcaggcgccagtcgtcgaacaagttgtcatcctggcctggcacagcggcgctgtcggggcgcgtatcgcggatcaccagcacctggcgccccgcttcaaagccctccacccgaccacgctcgaacccttcacgcacgc                                                                                                                                          <  7:32284‑M1/5‑1 (MQ=255)
    ggccgtcaacggcaggcgccagtcgtcgaacaagttgtcatcctggcctggcacagcggcgctgtcggggcgcgtatcgcggatcaccagcacctggcgccccgcttcaaagccctccacccgaccacgctcgaacccttcacgcacgc                                                                                                                                          <  4:152545‑M1/5‑1 (MQ=255)
    ggccgtcaacggcaggcgccagtcgtcgaacaagttgtcatcctggcctggcacagcggcgctgtcggggcgcgtatcgcggatcaccagcacctggcgccccgcttcaaagccctccacccgaccacgctcgaacccttcacgcacg                                                                                                                                           >  6:120523‑M1/145‑148 (MQ=255)
     gccgtcaacggcaggcgccagtcgtcgaacaagttgtcatcctggcctggcacagcggcgctgtcggggcgcgtatcgcggatcaccagcacctggcgccccgcttcaaagccctccacccgaccacgctcgaacccttcacgcacgc                                                                                                                                          <  6:280110‑M1/5‑1 (MQ=255)
      gTGGCCCACGAGCAACCCTTGGCCCCCGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGgccacgccac                                                                                                                                       <  7:100371/149‑1 (MQ=255)
         gCCCACGAGCAACCCTTGGCCCCCGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAg                                                                                                                                     <  7:232842/148‑1 (MQ=255)
           ccACGAGCAACCCTTGGCCCCCGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGc                                                                                                                                   >  1:157220/1‑148 (MQ=255)
           ccACGAGCAACCCTTGGCCCCCGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGc                                                                                                                                   >  4:307412/1‑148 (MQ=255)
           ccACGAGCAACCCTTGGCCCCCGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGc                                                                                                                                   <  2:157220/148‑1 (MQ=255)
                            cccccGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGcc                                                                                                                 >  1:246695/1‑149 (MQ=255)
                             ccccGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCCCGCCACAGGCCAGCGCACTTGCCCTGcc                                                                                                                 >  6:26957/1‑148 (MQ=255)
                             ccccGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGcc                                                                                                                 >  1:101791/1‑148 (MQ=255)
                             ccccGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGcc                                                                                                                 >  1:323477/1‑148 (MQ=255)
                              cccGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGa                                                                                                               >  3:109878/1‑149 (MQ=255)
                                cgccgACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATg                                                                                                             <  3:281388/149‑1 (MQ=255)
                                   cgACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGgcg                                                                                                          >  4:67114/1‑149 (MQ=255)
                                    gACCTTCCCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGgcgt                                                                                                         <  7:332927/149‑1 (MQ=255)
                                     aCCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGgcgtg                                                                                                        <  4:108860/149‑1 (MQ=255)
                                      ccTTACCCCTCCTGCCCAGTTGCCCGGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGgcgtgc                                                                                                       <  5:26957/149‑1 (MQ=255)
                                       cTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGgcgtgcg                                                                                                      <  1:352461/149‑1 (MQ=255)
                                        gtcatcctggcctggcacagcggcgctgtcggggcgcgtatcgcggatcaccagcacctggcgccccgcttcaaagccctccacccgaccacgctcgaacccttcacgCACGCCACAGGCCAGCGCACTGGCCATGCCGATGgcgtgc                                                                                                       >  6:4640‑M1/109‑148 (MQ=255)
                                         tcatcctggcctggcacagcggcgctgtcggggcgcgtatcgcggatcaccagcacctggcgccccgcttcaaagccctccacccgaccacgctcgaacccttcacgCACGCCACAGGCCAGCGCACTGGCCATGCCGATGgcgtgcg                                                                                                      >  6:21879‑M1/108‑148 (MQ=255)
                                               tcctGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGt                                                                                              >  1:337153/1‑149 (MQ=255)
                                                 ctGCTCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTc                                                                                            <  4:269778/149‑1 (MQ=255)
                                                 ctGCCCAGTTGCCCTGGTTTCGGCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTc                                                                                            <  8:104376/149‑1 (MQ=255)
                                                 ctGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGtt                                                                                             <  2:101791/148‑1 (MQ=255)
                                                 ctGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGACTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTc                                                                                            >  8:308135/1‑149 (MQ=255)
                                                   gCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGa                                                                                          >  4:367496/1‑149 (MQ=255)
                                                       aGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCGGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCCTGCCGATGGCGTGCGTGAAGGGTTCGAGCGt                                                                                      >  2:130874/1‑149 (MQ=255)
                                                        gTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTg                                                                                     <  3:307412/149‑1 (MQ=255)
                                                            cccTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCg                                                                                 >  4:222054/1‑149 (MQ=255)
                                                             ccTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCgg                                                                                >  3:161142/1‑149 (MQ=255)
                                                              cTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTAGAGCGTGGTCggg                                                                               >  2:56647/1‑149 (MQ=255)
                                                                 gTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTgg                                                                            <  3:59701/149‑1 (MQ=255)
                                                                  tttCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTg                                                                             >  1:280080/1‑148 (MQ=255)
                                                                  tttCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTg                                                                             >  6:306695/1‑147 (MQ=255)
                                                                  tttCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGa                                                                           <  3:367496/149‑1 (MQ=255)
                                                                   ttCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAg                                                                                                                                     >  5:10967/1‑90 (MQ=255)
                                                                   ttCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAg                                                                                                                                     <  6:10967/90‑1 (MQ=255)
                                                                        cgccTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCtt                                                                     >  1:101081/1‑149 (MQ=255)
                                                                         gccTGGCCGCCCGCCTGCTGGGGCGTGGCCTGGCCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCttt                                                                    >  3:248781/1‑149 (MQ=255)
                                                                         gccTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCttt                                                                    <  4:109878/149‑1 (MQ=255)
                                                                            tGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCAc                                                                                                                           >  2:46269/1‑91 (MQ=255)
                                                                            tGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTg                                                                   >  2:234311/1‑147 (MQ=255)
                                                                            tGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCAACGCCACAGGCCCGCACACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGAGTGGTCGGGGGGAGGGCTTTg                                                                   >  6:16440/1‑147 (MQ=255)
                                                                             ggCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGGGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAg                                                                >  7:226949/1‑149 (MQ=255)
                                                                                 gcccgccTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCggg                                                            <  2:246695/149‑1 (MQ=255)
                                                                                  gcggatcaccagcacctggcgccccgcttcaaagccctccacccgaccacgctcgaacccttcacgCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGaa                                                                                                  <  7:126016‑M1/45‑1 (MQ=255)
                                                                                  gcggatcaccagcacctggcgccccgcttcaaagccctccacccgaccacgctcgaacccttcacgCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGaa                                                                                                  >  8:126016‑M1/67‑111 (MQ=255)
                                                                                   ccgccTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGgc                                                          <  3:222054/149‑1 (MQ=255)
                                                                                             gggCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCt                                                >  2:44932/1‑149 (MQ=255)
                                                                                              ggCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTg                                               <  2:323477/149‑1 (MQ=255)
                                                                                              ggCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTg                                               <  2:280080/149‑1 (MQ=255)
                                                                                                 gTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGTGTGAAGGGTTCGAGCGTGGTCgg                                                                                <  8:246944/113‑1 (MQ=255)
                                                                                                      cTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCcg                                       <  5:238263/149‑1 (MQ=255)
                                                                                                         aCCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGa                                    <  7:308135/149‑1 (MQ=255)
                                                                                                           ccGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGTGTGCGTGAAGGGTTCGAGCGTGGTCGGGGGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATa                                  >  1:68217/1‑149 (MQ=255)
                                                                                                           ccGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATa                                  <  5:298306/149‑1 (MQ=255)
                                                                                                           ccGCCTGCAAGCCCAGCACAGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATa                                  >  7:254555/1‑149 (MQ=255)
                                                                                                                tGCAAGACCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGCGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACgcgc                             >  3:353736/1‑149 (MQ=255)
                                                                                                                   cAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAg                                                                          <  2:139494/102‑1 (MQ=255)
                                                                                                                   cAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAg                                                                          >  1:139494/1‑102 (MQ=255)
                                                                                                                        ccAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGa                        >  3:324103/1‑147 (MQ=255)
                                                                                                                        ccAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGa                        >  3:45142/1‑147 (MQ=255)
                                                                                                                         cAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAACCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAg                     >  4:132525/1‑149 (MQ=255)
                                                                                                                           gCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAgcg                   >  3:152545/1‑149 (MQ=255)
                                                                                                                              ccGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCACACTGGCCATGCCGATGGCGTGCGTTAAGGGTTCGAGCGTGGTCGGGTGGATGGCTTTGAAGCGGGGCGCCAGGTGCTTGTGATCCGCGATACGCGCCCCGACAGcgccg                <  5:16440/149‑1 (MQ=255)
                                                                                                                                gcgACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCt              <  2:354866/149‑1 (MQ=255)
                                                                                                                                  gACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCtgt            <  4:161142/149‑1 (MQ=255)
                                                                                                                                  gACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCtgt            <  3:67114/149‑1 (MQ=255)
                                                                                                                                    cTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTgc          <  2:337153/149‑1 (MQ=255)
                                                                                                                                       aTGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTgcc         <  4:324103/147‑1 (MQ=255)
                                                                                                                                           ttCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCt              <  3:26629/138‑1 (MQ=255)
                                                                                                                                           ttCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCt              >  4:26629/1‑138 (MQ=255)
                                                                                                                                             ccTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTgccaggccag  >  8:190452/1‑148 (MQ=255)
                                                                                                                                              cTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGc                                                 <  6:226347/100‑1 (MQ=255)
                                                                                                                                              cTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGc                                                 >  5:226347/1‑100 (MQ=255)
                                                                                                                                                    |                                                                                                                                            
GTGACCGTGGCCCACGAGCAACCCTTGGCCCCCGCCGACCTTACCCCTCCTGCCCAGTTGCCCTGGTTTCGCCGCCTGGCCGCCCGCCTGCTGGGGCGTGGCCTGACCCGCCTGCAAGCCCAGCACCGCGACTCATGGTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAG  >  NC_002947/2926728‑2927015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.