New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3483144 = | 48 (0.810) | 5 (0.090) | 5/246 | NT | 9.8% | coding (2780/3804 nt) | PP_3091 | membrane protein |
? | NC_002947 | 3483187 = | 46 (0.810) | coding (2737/3804 nt) | PP_3091 | membrane protein |
CCCACATCCTGCGAGCGCTGGATGTTGTTCATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGACCGGCAGGTCCCA > NC_002947/3482997‑3483289 | cccACATCCTGCGAGCGCTGGATGTTGTTCATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGc < 3:307108/148‑1 (MQ=255) aacaTCCAGCGCTCGCAGGATGTTGTTCATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGc > 6:338028/2‑149 (MQ=255) agtgaagaacctgctgcaggcggtcaacgacaatacccagtgggacctgccggtcaagcaggccatcccggccccaggcaccagccgcgatgacggtttctggagcaaggtcaccggtctgttcgacgccaacgacaccctgcctgcc < 6:365710‑M1/5‑1 (MQ=255) aTCCTGCGAGCGCTGGATGTTGTTCATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTAGGCGCACAACCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCcgt > 5:10639/1‑149 (MQ=255) tCCTGCGAGCGCTGGATGTTGTTCATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCcgtc < 5:186625/149‑1 (MQ=255) gATGTTGTTCATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCCGCGTTGTTTTAGGCGAACACCCGCCCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCAccgccccca > 6:311289/1‑145 (MQ=255) gttgttCATGCGCACCTTGAGTTTGCGCAAGGCGGCCATGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCACGCGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAg < 1:269418/148‑1 (MQ=255) gttCATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCatcgtc < 8:214739/132‑1 (MQ=255) gttCATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCatcgtc > 7:214739/1‑132 (MQ=255) ttCATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCg < 2:294978/148‑1 (MQ=255) cATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCggg < 8:262914/148‑1 (MQ=255) cATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCggg < 5:338028/148‑1 (MQ=255) cATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCggg < 4:325706/148‑1 (MQ=255) ccgtGAGTTGGCGCAAGGCGGCCAGGTAGCGATCCATGATGGGGCGGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTg < 8:323359/146‑1 (MQ=255) cTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCATGGAGGAGATGCAGTCGTACACCCCCCGCAGGGCCGGGGCAACCTTgg > 1:316017/1‑149 (MQ=255) agtgggacctgccggtcaagcaggccatcccggccccaggcaccagccgcgatgacagtttctggagcaaggtcaccggtctgttcgacgccaacgacaccctgcCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTggcagg < 3:181780‑M1/44‑1 (MQ=255) tGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGgcaggcag < 4:134148/148‑1 (MQ=255) ggacctgccggtcaagcaggccatcccggccccaggcaccagccgcgatgacagtttctggagcaaggtcaccggtctgttcgacgccaacgacaccctgcCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGcaggcagg > 4:181780‑M1/102‑149 (MQ=255) gcAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGgtg > 7:178458/1‑149 (MQ=255) gcAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCGTCGGGGGGGTTTTCGGCGAACCCCCCCCCCAC‑CCGCGCGAAGCCCGTGGCCCGGCTGCCCGCGTGCCCCCCCGCCAGGGGCGGGGGGGCGGTGGCAGGCAcgggg > 8:136950/1‑147 (MQ=255) gcggcCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGtt < 8:139192/149‑1 (MQ=255) cggtcaagcaggccatcccggccccaggcaccagccgcgatgacggtttctggagcaaggtcaccggtctgttcgacgccaacgacaccctgcCTGCCAACGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGtt > 3:267236‑M1/94‑149 (MQ=255) cGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAg < 6:10639/149‑1 (MQ=255) gATCCATGATGGTGCTGTCGGCGCCGTGGGCGTTGTTTTAGGCGAACACCCCCGCCAC‑CGGCACGAACCGCATGGCCAGGCTGCCGTCGTCCCCCGCCCGCCGGGCCGGGGCGCCGGTGGCAGGCAGGGGGGCGGTGGCGGCGCACAGa > 8:337646/1‑149 (MQ=255) gATCCATGATGGTGCTGTCGGCGCCGTAGGCCTTGTTTTAGGCGAAAACCCCCCCCCC‑CCGCGCGAAAAGCGTGGCCCGGCAGCCCTCGTACACCCCCCGCCGGGCCGGGGCGCCGTTTGCACGCCGGGTGTAGTTGGCGTGGcacaa > 4:187806/1‑147 (MQ=255) aTCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGAc < 7:337646/149‑1 (MQ=255) aTCCATGATGGTGCTGGCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTggc < 5:198712/120‑1 (MQ=255) cATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCg < 5:311289/148‑1 (MQ=255) cATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGGCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCg < 7:272036/148‑1 (MQ=255) atgGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGAc < 3:187806/149‑1 (MQ=255) tGCTGTCGGCGCCTTCGGCGTTGTTTTAGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTAGTCCACCGCCGGCAGGGCCCGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTg > 2:54487/1‑149 (MQ=255) cTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGGCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGc < 3:268278/148‑1 (MQ=255) gcgcCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTc < 1:329317/144‑1 (MQ=255) gcgcCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTc > 2:329317/1‑144 (MQ=255) gcgatgacggtttctggagcaaggtcaccggtctgttcgacgccaacgacaccctgcCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGaa > 6:92915‑M1/58‑122 (MQ=255) gcgatgacggtttctggagcaaggtcaccggtctgttcgacgccaacgacaccctgcCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGaa < 5:92915‑M1/65‑1 (MQ=255) ttCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGt < 8:178458/149‑1 (MQ=255) gttgttTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAAcc > 5:179288/1‑141 (MQ=255) gttgttTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAAcc < 6:179288/141‑1 (MQ=255) tttCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTg > 3:375856/1‑149 (MQ=255) acCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGc > 6:124275/1‑149 (MQ=255) cccGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCAACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGcc < 2:316017/149‑1 (MQ=255) ccGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCg > 8:116705/1‑149 (MQ=255) cgcgCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCgg > 7:2640/1‑149 (MQ=255) cgcgCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCgg > 4:204744/1‑149 (MQ=255) gcCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGAt < 8:2640/149‑1 (MQ=255) gcCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGAt > 7:43668/1‑149 (MQ=255) c‑cGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACTGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCg > 6:144888/1‑141 (MQ=255) c‑cGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACTGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCg < 5:144888/141‑1 (MQ=255) ggCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTg < 6:378284/149‑1 (MQ=255) aaGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCCGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGAc > 5:365710/1‑149 (MQ=255) cTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGACCGGCa < 6:63331/149‑1 (MQ=255) ttGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGACCGGCAg > 6:351802/1‑149 (MQ=255) gCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGACCGGCAGGTc > 7:265937/1‑149 (MQ=255) gCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGACCGGCAGGTc > 1:357741/1‑149 (MQ=255) gCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGACCGGCAGGTc > 5:306337/1‑149 (MQ=255) aGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGACCTGCCGGTcaag < 3:204744/149‑4 (MQ=255) | CCCACATCCTGCGAGCGCTGGATGTTGTTCATGCGCACCTTGAGTTTGCGCAAGGCGGCCAGGTAGCGATCCATGATGGTGCTGTCGGCGCCTTCGGCGTTGTTTTCGGCGAACACCCGCGCCAC‑CGGCTCGAAGCGCTTGGCCAGGCTGCCGTCGTCCACCGCCGGCAGGGCCGGGGCGACGTTGGCAGGCAGGGTGTCGTTGGCGTCGAACAGACCGGTGACCTTGCTCCAGAAACCGTCATCGCGGCTGGTGCCTGGGGCCGGGATGGCCTGCTTGACCGGCAGGTCCCA > NC_002947/3482997‑3483289 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |