New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3891041 =	58 (0.980)	3 (0.050)	3/242	NT	5.0%	coding (25/1587 nt)	PP_3435	hypothetical protein
	?	NC_002947	3891104 =	58 (1.040)					coding (88/1587 nt)	PP_3435	hypothetical protein

CTTATTGTTGTATTCGTAAATCGATTCTACATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAGGCGTTGGAGCACGTCGAA  >  NC_002947/3890896‑3891187                                                                                                                                                   |                                                                                                                                                    cTTATTGTTGTATTCGTAAATCGATTCTACATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGAATGCCCCTTACCGTCAAAcgccgcgccg                                                                                                                                                  >  2:264616/1‑149 (MQ=255)  atgggctgtcagtcagtggaagtagcgaattggcggcacgggacaggttgtcgagtatgtgttcgacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagg                                                                                                                                                     >  6:18510‑M1/146‑146 (MQ=255)  atgggctgtcagtcagtggaagtagcgaattggcggcacgggacaggttgtcgaggatgtgttcgacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagGCCg                                                                                                                                                  <  4:325204‑M1/4‑1 (MQ=255)    aTTGTTGTATTCGTAAATCGATTCTACATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAAcgccgcg                                                                                                                                                     <  6:312691/143‑1 (MQ=255)    aTTGTTGTATTCGTAAATCGATTCTACATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAAcgccgcg                                                                                                                                                     >  5:312691/1‑143 (MQ=255)     ggctgtcagtcagtggaagtagcgaattggcggcacgggacaggttgtcgaggatgtgttcgacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagGCCGCa                                                                                                                                                >  3:325204‑M1/143‑148 (MQ=255)        tgtcagtcagtggaagtagcgaattggcggcacgggacaggttgtcgaggatgtgttcgacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagg                                                                                                                                                     <  7:344332‑M1/1‑1 (MQ=255)        tgtcagtcagtggaagtagcgaattggcggcacgggacaggttgtcgaggatgtgttcgacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagg                                                                                                                                                     >  8:344332‑M1/140‑140 (MQ=255)              tCGTAAATCGATTCTACATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGgc                                                                                                                                      <  8:136302/148‑1 (MQ=255)                gTAAATCGATTCTACATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCa                                                                                                                                   >  1:105519/1‑149 (MQ=255)                   aaTCGATTCTACATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGc                                                                                                                                >  8:225334/1‑149 (MQ=255)                     tCGATTCTACATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGctc                                                                                                                              >  3:80663/1‑149 (MQ=255)                        aTTCTACATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTCGTGGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCtt                                                                                                                            >  1:118117/1‑149 (MQ=255)                             aCATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTg                                                                                                                     >  6:7749/1‑149 (MQ=255)                              cATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTgg                                                                                                                    <  1:369249/149‑1 (MQ=255)                              cATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTgg                                                                                                                    <  2:301094/149‑1 (MQ=255)                                ttGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCa                                                                                                                                   <  6:327687/133‑1 (MQ=255)                                  gcggcacgggacaggttgtcgaggatgtgttcgacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagGc                                                                                                                                                    <  8:125307‑M1/2‑1 (MQ=255)                                  gcggcacgggacaggttgtcgaggatgtgttcgacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagGc                                                                                                                                                    >  7:125307‑M1/114‑115 (MQ=255)                                     tAAAATGGTTTGTCGCGGTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGtcgtcg                                                                                                             <  4:173579/149‑1 (MQ=255)                                        aaTGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCg                                                                                                          <  5:272157/149‑1 (MQ=255)                                              aggttgtcgaggatgtgttcgacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagGCCg                                                                                                                                                  >  2:123074‑M1/102‑105 (MQ=255)                                              aggttgtcgaggatgtgttcgacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagGCCg                                                                                                                                                  <  1:123074‑M1/4‑1 (MQ=255)                                               tGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGtgctgc                                                                                                    <  2:118117/148‑1 (MQ=255)                                                 tCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCgg                                                                                                 >  7:69601/1‑149 (MQ=255)                                                   gcgTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGt                                                                                                <  2:105519/148‑1 (MQ=255)                                                     gTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCAt                                                                                             >  5:347494/1‑149 (MQ=255)                                                             tGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGc                                                                                      <  1:167981/148‑1 (MQ=255)                                                                 cgacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTg                                                                                   >  7:251853‑M1/83‑148 (MQ=255)                                                                  gacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGc                                                                                      >  6:19602‑M1/82‑144 (MQ=255)                                                                  gacgtgctccaacgcctggcgggtggtggcgtggctgctggcctgcatttcacgttcgacctgccagttcatcacggccagGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGc                                                                                      <  5:19602‑M1/63‑1 (MQ=255)                                                                     cgcgGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGt                                                                              <  4:80663/148‑1 (MQ=255)                                                                     cgcgGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGAATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTGCCCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGt                                                                              <  1:264616/149‑1 (MQ=255)                                                                      gcggcgACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCAt                                                                                             <  7:288376/132‑1 (MQ=255)                                                                      gcggcgACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCAt                                                                                             >  8:288376/1‑132 (MQ=255)                                                                      gcggcgACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGtga                                                                            >  6:242865/1‑149 (MQ=255)                                                                          cgACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTc                                                                                               >  5:64640/1‑126 (MQ=255)                                                                          cgACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTc                                                                                               <  6:64640/126‑1 (MQ=255)                                                                               aaCGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGc                                                                   <  2:279830/149‑1 (MQ=255)                                                                                aCGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCa                                                                  <  7:225334/149‑1 (MQ=255)                                                                                  ggCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAgg                                                                <  2:181106/149‑1 (MQ=255)                                                                                         ctc‑tCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACg                                                         >  7:182823/1‑149 (MQ=255)                                                                                          tc‑tcGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTgg                                                                                  <  1:72345/123‑1 (MQ=255)                                                                                          tc‑tcGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTgg                                                                                  >  2:72345/1‑123 (MQ=255)                                                                                          tc‑tcGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGt                                                        >  8:52015/1‑149 (MQ=255)                                                                                          tc‑tcGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGt                                                        >  5:177082/1‑149 (MQ=255)                                                                                           c‑tcGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGt                                                        >  5:328372/1‑148 (MQ=255)                                                                                               gTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGaa                                                     <  6:347494/148‑1 (MQ=255)                                                                                                      cTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGc                                             <  8:69601/149‑1 (MQ=255)                                                                                                         cATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCca                                           <  5:242865/148‑1 (MQ=255)                                                                                                          aTGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCTGACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGc                                             >  1:269737/1‑145 (MQ=255)                                                                                                          aTGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGc                                             <  2:269737/145‑1 (MQ=255)                                                                                                               aGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAgcca                                    >  4:92856/1‑149 (MQ=255)                                                                                                                 tCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAgccac                                   >  4:349847/1‑148 (MQ=255)                                                                                                                 tCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAgccac                                   <  3:349847/148‑1 (MQ=255)                                                                                                                   aGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAgccacgc                                 >  2:221816/1‑148 (MQ=255)                                                                                                                   aGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATCTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAgccacgcc                                >  5:124700/1‑149 (MQ=255)                                                                                                                    gATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAgccacgcca                               <  6:177082/149‑1 (MQ=255)                                                                                                                     aTCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAgccacgccac                              <  1:82036/149‑1 (MQ=255)                                                                                                                     aTCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAgccacgccac                              >  8:206035/1‑149 (MQ=255)                                                                                                                              ccccTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAgcgacgccac                              <  6:58649/140‑1 (MQ=255)                                                                                                                              ccccTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAgcgacgccac                              >  5:58649/1‑140 (MQ=255)                                                                                                                                ccTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAgg                   >  7:156177/1‑149 (MQ=255)                                                                                                                                    aCCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAGGCGt                <  3:92856/148‑1 (MQ=255)                                                                                                                                     ccGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAGGCGTTg              <  6:124700/149‑1 (MQ=255)                                                                                                                                      cGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGcc                                                                                     <  7:282275/77‑1 (MQ=255)                                                                                                                                      cGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGcc                                                                                     >  8:282275/1‑77 (MQ=255)                                                                                                                                       gTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCACCAGGCGTTg              >  4:87167/1‑147 (MQ=255)                                                                                                                                        tCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAGGCGTTGGAg           <  8:156177/149‑1 (MQ=255)                                                                                                                                           aaCTCCGCGCCGCAATCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCAGGTCATGTGCGGCCTGGCCGTGATGAACTATCAGGTCGAACGTGAAATGCAGGCCAGAAGCCACGCCACAACCCGCAAGGCGTTGGAGCAc        >  8:203657/1‑149 (MQ=255)                                                                                                                                           aaCGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAGGCGTTGGAGCAc        >  4:92871/1‑149 (MQ=255)                                                                                                                                            aCGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAGGCGTTGGAGCACg       <  7:52015/149‑1 (MQ=255)                                                                                                                                            aCGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAGGCGTTGGAGCACg       <  5:7749/149‑1 (MQ=255)                                                                                                                                                 gcgccgcACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAGGCGTTGGa            >  3:230908/1‑139 (MQ=255)                                                                                                                                                 gcgccgcACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAGGCGTTGGa            <  4:230908/139‑1 (MQ=255)                                                                                                                                                 gcgccgcACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAGGCGTTGGAGCACGTCGaa  <  7:206035/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CTTATTGTTGTATTCGTAAATCGATTCTACATTGCGTAAAATGGTTTGTCGCGTTTTAGTTGCTCGTACGCGGCGACAAACGGCTATCCTC‑TCGTTTTTACTCCATGATAGTCAGATCAGCATGCCCCTTACCGTCAAACGCCGCGCCGCACTCAGCTGGCGCACGCTCTTG‑CCCTGGGTCGTCGGCGTGCTGCCGGTCATGTGCGGCCTGGCCGTGATGAACTGGCAGGTCGAACGTGAAATGCAGGCCAGCAGCCACGCCACCACCCGCCAGGCGTTGGAGCACGTCGAA  >  NC_002947/3890896‑3891187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.