New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4642974	69 (1.170)	4 (0.070)	3/238	NT	5.6%	intergenic (+20/‑160)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase
	?	NC_002947	= 4642997	70 (1.270)					intergenic (+43/‑137)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase

CTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGAAACTCGAACAAG  >  NC_002947/4642831‑4643120                                                                                                                                                |                                                                                                                                                   cTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAg                                                                                                                                               >  4:78445/1‑149 (MQ=255) cTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAg                                                                                                                                               >  3:359498/1‑149 (MQ=255)      accaccCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCg                                                                                                                                          >  7:112505/1‑149 (MQ=255)        caccCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCggg                                                                                                                                        >  5:26303/1‑149 (MQ=255)           ccTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCtt                                                                                                                                     >  1:297844/1‑149 (MQ=255)           ccTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCtt                                                                                                                                     >  6:351724/1‑149 (MQ=255)           ccTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCtt                                                                                                                                     <  3:138773/149‑1 (MQ=255)            cTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGGCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTg                                                                                                                                    <  8:112505/149‑1 (MQ=255)                   aagcaaCGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCcgcg                                                                                                                              >  2:213932/1‑148 (MQ=255)                   aagcaaCGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCAcgct                                                                                                                              >  8:173207/1‑147 (MQ=255)                   aagcaaCGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGACCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCcgcg                                                                                                                              >  1:88146/1‑148 (MQ=255)                      cAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCGCGGGCAGGAGCGGGCTTGCCCGCGAa                                                                                                                            <  8:116681‑M2/147‑2 (MQ=255)                       aaCGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagag                                                                                                                         >  6:312000‑M2/1‑145 (MQ=255)                       aaCGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagag                                                                                                                         >  3:78445‑M2/1‑145 (MQ=255)                        aCGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagagg                                                                                                                        >  2:297844‑M2/1‑144 (MQ=255)                           ggAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccg                                                                                                                     >  6:86017‑M2/1‑141 (MQ=255)                            gAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggccgg                                                                                                                    <  7:74726‑M1/149‑33 (MQ=255)                            gAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCGTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggccgg                                                                                                                    <  3:64854‑M1/149‑33 (MQ=255)                                  cTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGc                                                                                                              >  8:130481/1‑149 (MQ=255)                                   ttCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGc                                                                                                              >  8:341352/1‑148 (MQ=255)                                      aTCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAAc                                                                                                          >  4:3570/1‑149 (MQ=255)                                       tCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCTGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAg                                                                                                                                               >  3:58647/1‑111 (MQ=255)                                       tCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCTGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAg                                                                                                                                               <  4:58647/111‑1 (MQ=255)                                       tCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGTTTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCAGCGAAGAGGCCGGCACAGCCAAcc                                                                                                         >  2:142890/1‑149 (MQ=255)                                       tCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAAcc                                                                                                         <  5:351724/149‑1 (MQ=255)                                          cgcATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCggg                                                                                                                                        <  2:324467/115‑1 (MQ=255)                                          cgcATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCggg                                                                                                                                        >  1:324467/1‑115 (MQ=255)                                                 cGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCg                                                                                               <  4:189268/149‑1 (MQ=255)                                                 cGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGCAGCGGGCTTGCCCGCGAACAGGCCGGCACAGCCAACCCAAAAAACCg                                                                                               >  2:380851/1‑149 (MQ=255)                                                  gAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCgg                                                                                              >  1:129212/1‑149 (MQ=255)                                                         cGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATc                                                                                       <  2:129212/149‑1 (MQ=255)                                                         cGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGCCACAGCCAACCCAAAAAACCGGCTAGAt                                                                                        <  1:213932/148‑1 (MQ=255)                                                          ggCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCa                                                                                      >  6:19157/1‑149 (MQ=255)                                                          ggCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCa                                                                                      >  8:267200/1‑149 (MQ=255)                                                          ggCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCa                                                                                      >  4:170658/1‑149 (MQ=255)                                                              gAAGTGCCCAAGATCAGGGCCTTCGTGCAGGGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGaa                                                                                  <  6:209993/149‑1 (MQ=255)                                                                    cccAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCAt                                                                             <  6:26303/148‑1 (MQ=255)                                                                    cccAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATg                                                                            <  6:303131/149‑1 (MQ=255)                                                                     ccAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggccgggg                                                                                                                  >  7:84318‑M1/1‑76 (MQ=255)                                                                     ccAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggccgggg                                                                                                                  <  8:84318‑M1/110‑35 (MQ=255)                                                                     ccAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATgg                                                                           <  2:88146/149‑1 (MQ=255)                                                                      cAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCaaaaa                                                                                                   <  2:376437/124‑1 (MQ=255)                                                                      cAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCaaaaa                                                                                                   >  1:376437/1‑124 (MQ=255)                                                                      cAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATgg                                                                           >  5:75912/1‑148 (MQ=255)                                                                      cAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATgg                                                                           >  1:334681/1‑148 (MQ=255)                                                                      cAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATg                                                                            >  2:47578/1‑147 (MQ=255)                                                                      cAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATg                                                                            <  1:47578/147‑1 (MQ=255)                                                                       aaGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGaa                                                                         >  8:99944/1‑149 (MQ=255)                                                                       aaGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGaa                                                                         >  4:171465/1‑149 (MQ=255)                                                                              gggCCTTCGTGCAGTGGATCCGGGAGCGGGGGGCAGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGc                                                                  <  1:21929/149‑1 (MQ=255)                                                                                     cGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGa                                                            <  7:173207/148‑1 (MQ=255)                                                                                      gTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGaa                                                           <  2:334681/148‑1 (MQ=255)                                                                                              gATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGtt                                                  >  4:247980/1‑149 (MQ=255)                                                                                               aTCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGttt                                                 <  7:341352/149‑1 (MQ=255)                                                                                                    ggAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAAACGAATTATTCGATTGCgat                                            <  6:75912/149‑3 (MQ=255)                                                                                                    ggAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCAT‑GAATGATCGCAATCGAATAATTCGTTTGCGGaa                                           <  7:267200/149‑1 (MQ=255)                                                                                                      aGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAAt                                          <  4:359498/149‑1 (MQ=255)                                                                                                               cTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACccgccg                                 <  5:19157/149‑1 (MQ=255)                                                                                                                tGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATc                                                                    >  4:95053/1‑113 (MQ=255)                                                                                                                tGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATc                                                                    <  3:95053/113‑1 (MQ=255)                                                                                                                tGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGtt                                                  <  6:29804/131‑1 (MQ=255)                                                                                                                tGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGa                                >  3:30224/1‑149 (MQ=255)                                                                                                                tGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGACCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGAGGAATAACcctccg                                 >  4:199399/1‑148 (MQ=255)                                                                                                                       gattgattTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCtt                         >  1:225602/1‑149 (MQ=255)                                                                                                                       gattgattTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCtt                         >  4:194319/1‑149 (MQ=255)                                                                                                                       gattgattTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCtt                         <  3:170658/149‑1 (MQ=255)                                                                                                                       gattgattTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGCCTAGATCACGAATCCATGGAATGATCCCAATCGAATAATTCGTTTGCGCAATAACCCGCAGaaccgc                           >  8:144748/1‑142 (MQ=39)                                                                                                                        attgattTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTg                        >  3:256570/1‑149 (MQ=255)                                                                                                                          tgattTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGa                      >  2:366481/1‑149 (MQ=255)                                                                                                                           gattTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCAGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGa                      <  1:380851/148‑1 (MQ=255)                                                                                                                               tGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGataat                  <  7:130481/148‑1 (MQ=255)                                                                                                                                 aCCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGAtaataa                <  2:225602/148‑1 (MQ=255)                                                                                                                                  ccTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAg               <  1:142890/148‑1 (MQ=255)                                                                                                                                   cTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAg               <  5:84268/147‑1 (MQ=255)                                                                                                                                   cTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAg               >  6:84268/1‑147 (MQ=255)                                                                                                                                   cTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGCCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCAGACCACACGCTTCTATAATAAGa              >  2:339946/1‑148 (MQ=39)                                                                                                                                     gCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACccgccg                                 >  3:130262/1‑127 (MQ=255)                                                                                                                                     gCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACccgccg                                 <  4:130262/127‑1 (MQ=255)                                                                                                                                      ccccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgg                                                 >  7:84318‑M2/1‑34 (MQ=255)                                                                                                                                      ccccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgg                                                 <  8:84318‑M2/110‑77 (MQ=255)                                                                                                                                      ccccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGaaa            <  7:6709/147‑1 (MQ=255)                                                                                                                                       cccGGCCTGTGGCATGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCCGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGAAACTc         <  5:117386/149‑1 (MQ=255)                                                                                                                                       ccaggCCTCTGGCAGGAGCTGTCTTGCCTGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCTGCTAGATCACGAATCCATGGAATGATCGCAATCTAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGAAACt          <  3:199399/145‑1 (MQ=255)                                                                                                                                        ccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgacggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctc        <  3:64854‑M2/149‑118 (MQ=255)                                                                                                                                        ccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctc        <  7:74726‑M2/149‑118 (MQ=255)                                                                                                                                         cGGCCTCTtcgcgggcaagcccgctcctgccagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctcc       >  6:86017‑M1/1‑8 (MQ=255)                                                                                                                                         cGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGAAACTCGa       <  3:171465/149‑1 (MQ=255)                                                                                                                                            ccTCTtcgcgggcaagcccgctcctgccagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctcccgt    >  2:297844‑M1/1‑5 (MQ=255)                                                                                                                                             ctcttcgcgggcaagcccgctcctgccagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctcccgtt   >  6:312000‑M1/1‑4 (MQ=255)                                                                                                                                             ctcttcgcgggcaagcccgctcctgccagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctcccgtt   >  3:78445‑M1/1‑4 (MQ=255)                                                                                                                                                ttcgcgggcaagcccgctcctgcccgcggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctcccgttg  <  8:116681‑M1/147‑147 (MQ=255)                                                                                                                                                |                                                                                                                                                   CTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGAAACTCGAACAAG  >  NC_002947/4642831‑4643120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.