| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5147758 | 0 (0.000) | 3 (0.050) | 3/240 | NT | 100% | coding (863/1302 nt) | mscMB | miniconductance mechanosensitive channel protein |
| ? | NC_002947 | = 5147823 | NA (NA) | coding (928/1302 nt) | mscMB | miniconductance mechanosensitive channel protein | |||||
ATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTACCTGGCGGGCAAGCGCCAGGAACTGCAAAACTGGAACGAGGCGCTGGGGCCGGTGGCGGACCTGTCGGCCAACCGCCGCAAGCTGACCAACATCGGCACCTTCCGCGCGTTTGCCCTGGC > NC_002947/5147610‑5147905 | aTCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCT < 1:324819‑M1/149‑1 (MQ=255) tCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCT > 4:112398‑M1/1‑148 (MQ=255) tgtCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGc < 8:354383/149‑1 (MQ=31) gCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTcgttccagttttgcagttcctggcgcttgcccgccaggtagtcactcagtagctgcacctggctcaggcgctg < 8:130505‑M1/149‑74 (MQ=255) cATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTcgttccagttttgcagttcctggcgcttgcccgccaggtagtcactcagtagctgcacctggctcaggcgctgttcttcttc < 3:248766‑M1/133‑83 (MQ=255) cATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTcgttccagttttgcagttcctggcgcttgcccgccaggtagtcactcagtagctgcacctggctcaggcgctgttcttcttc > 4:248766‑M1/1‑51 (MQ=255) cAGCGCCTcgttccagttttgcagttcctggcgcttgcccgccaggtagtcactcagtagctgcacctggctcaggcgctgttcttcttcgcgggtgaggaagcgcacgccggcggcgtcgatgaacaggctgcgcttgatgcgccggc > 1:133248‑M1/1‑8 (MQ=255) cAGCGCCTcgttccagttttgcagttcctggcgcttgcccgccaggtagtcactcagtagctgcacctggctcaggcgctgttcttcttcgcgggtgaggaagcgcacgccggcggcgtcgatgaacaggctgcgcttgatgcgccggc > 2:164232‑M1/1‑8 (MQ=255) cAGCGCCTcgttccagttttgcagttcctggcgcttgcccgccaggtagtcactcagtagctgcacctggctcaggcgctgttcttcttcgcgggtgaggaagcgcacgccggcggcgtcgatgaacaggctgcgcttgatgcgccggc > 3:162163‑M1/1‑8 (MQ=255) ccTcgttccagttttgcagttcctggcgcttgcccgccaggtagtcactcagtagctgcacctggctcaggcgctgttcttcttcgcgggtgaggaagcgcacgccggcggcgtcgatgaacaggctgcgcttgatgcgccggccaccg < 1:164232‑M1/149‑147 (MQ=255) cTcgttccagttttgcagttcctggcgcttgcccgccaggtagtcactcagtagctgcacctggctcaggcgctgttcttcttcgcgggtgaggaagcgcacgccggcggcgtcgatgaacaggctgcgcttgatgcgccggcccccgg > 6:26658‑M1/1‑2 (MQ=255) cTcgttccagttttgcagttcctggcgcttgcccgccaggtagtcactcagtagctgcacctggctcaggcgctgttcttcttcgcgggtgaggaagcgcacgccggcggcgtcgatgaacaggctgcgcttgatgcgccggccaccg > 7:322758‑M1/1‑2 (MQ=255) cTcgttccagttttgcagttcctggcgcttgcccgccaggtagtcactcagtaaatgcacctggctcaggcgctgttcttcttcgcgggtgaggaagcgcacgccggcggcgtcgatgaacaggctgcgcttgatgcgccggccaccg > 1:288716‑M1/1‑2 (MQ=255) | ATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGAGCCAGGTGCAGCTACTGAGTGACTACCTGGCGGGCAAGCGCCAGGAACTGCAAAACTGGAACGAGGCGCTGGGGCCGGTGGCGGACCTGTCGGCCAACCGCCGCAAGCTGACCAACATCGGCACCTTCCGCGCGTTTGCCCTGGC > NC_002947/5147610‑5147905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |