New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5816852	47 (0.800)	14 (0.250)	7/238	NT	30.9%	intergenic (+38/+91)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	= 5816917	19 (0.350)					intergenic (+103/+26)	PP_5092/pilT	NLP/P60 protein/twitching motility protein

AAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGT  >  NC_002947/5816707‑5816999                                                                                                                                                     |                                                                                                                                                    aaGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACg                                                                                                                                                  >  8:290549/1‑149 (MQ=255) aaGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACg                                                                                                                                                  >  6:331177/1‑149 (MQ=255)     gggTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGGACccccc                                                                                                                                              >  7:240272/1‑148 (MQ=255)      ggTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGc                                                                                                                                             >  4:303599/1‑149 (MQ=255)        tGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTc                                                                                                                                           >  6:300605/1‑149 (MQ=255)         gAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGAGTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCgcgcccgctc                                                                                                                                           >  1:298385‑M1/1‑139 (MQ=255)          aGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCAGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTcc                                                                                                                                          <  1:84824/148‑1 (MQ=255)           gTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCca                                                                                                                                        <  7:290549/149‑1 (MQ=255)            tATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCcac                                                                                                                                       <  6:57594/149‑1 (MQ=255)              tCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                                     <  5:84139/149‑1 (MQ=255)              tCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                                     <  7:207418/149‑1 (MQ=255)               ggACACCTTGATCAAGCCTTACTGGAAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGT‑AGCTGAGTCTGGACAAGCGTTAATCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                                     <  2:288805/147‑1 (MQ=39)                    ccTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAgcg                                                                                                                               >  8:159626/1‑149 (MQ=255)                     cTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAgcg                                                                                                                               <  8:162431/148‑1 (MQ=255)                     cTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAgcg                                                                                                                               >  7:162431/1‑148 (MQ=255)                      ttGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGcgcg                                                                                                                             >  2:291268/1‑149 (MQ=255)                               ccTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTcg                                                                                                                    <  7:159626/149‑1 (MQ=255)                                   aCTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTcgcgc                                                                                                                 <  5:331177/148‑1 (MQ=255)                                   aCTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTcgcgc                                                                                                                 <  4:86766/148‑1 (MQ=255)                                     tGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGAGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCgcgcccgctcccacaggtatgtgagctgcgcgcgagagc                                                                                                              >  1:358654‑M1/1‑110 (MQ=255)                                         aGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGCAAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCt                                                                                                           >  1:78741/1‑149 (MQ=255)                                           aaGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCg                                                                                                                          >  5:147695/1‑131 (MQ=255)                                           aaGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCg                                                                                                                          <  6:147695/131‑1 (MQ=255)                                            aGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTcaca                                                                                                       <  2:78741/149‑1 (MQ=255)                                            aGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTcac                                                                                                        >  6:56091/1‑148 (MQ=255)                                               aCTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctac                                                                                                    <  2:6302‑M1/149‑50 (MQ=255)                                               aCTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATAc                                                                                                    <  1:340057/149‑1 (MQ=255)                                               aCTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATAc                                                                                                    <  5:56091/149‑1 (MQ=255)                                                 tACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacct                                                                                                  >  4:336307‑M1/1‑98 (MQ=255)                                                 tACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCt                                                                                                  >  3:116327/1‑149 (MQ=255)                                                   cGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgt                                                                                                <  1:291268/149‑1 (MQ=255)                                                     tggtggCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                              <  3:336307‑M1/149‑56 (MQ=255)                                                     tggtggCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                              <  8:81565/149‑1 (MQ=255)                                                     tggtggCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                              <  5:300605/149‑1 (MQ=255)                                                       gtggCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtggga                                                                                            <  2:298385‑M1/149‑58 (MQ=255)                                                            cAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcggg                                                                                       <  2:358654‑M1/149‑63 (MQ=255)                                                            cAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCggg                                                                                       >  7:329105/1‑149 (MQ=255)                                                               gCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgcgc                                                                                    <  8:329105/149‑1 (MQ=255)                                                               gCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgcgc                                                                                    <  7:295000/149‑1 (MQ=255)                                                                 gg‑gTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCTTTCGCGGGCgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgtgc                                                                                  <  6:38614‑M1/149‑68 (MQ=255)                                                                     tgctgcCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCGCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCGCCCATACCAGTGGGCGCGGGCGCgcccc                                                                               <  6:308061‑M2/149‑6 (MQ=255)                                                                       ctgcCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                              >  8:209433‑M1/1‑77 (MQ=255)                                                                       ctgcCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                              <  7:209433‑M1/132‑56 (MQ=255)                                                                            gAAAGAGCAGC‑AGCTGAGTCAGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAgg                                                                        >  5:147032/1‑149 (MQ=255)                                                                                gagCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCt                                                                    <  7:219263/149‑1 (MQ=255)                                                                                    agc‑agcTGAGGCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGCACCGGCCCCTTCGCGGGCACGCCCGCTCCCACCGGTAGCGCGGCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGc                                                                <  5:234231/149‑1 (MQ=255)                                                                                     gc‑agcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCca                                                                                                                                        <  1:50891/77‑1 (MQ=255)                                                                                     gc‑agcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCca                                                                                                                                        >  2:50891/1‑76 (MQ=255)                                                                                      c‑agcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                              >  5:99054‑M1/1‑62 (MQ=255)                                                                                      c‑agcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                              <  6:99054‑M1/117‑56 (MQ=255)                                                                                              gTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAg                                                                                                                                 <  8:300526/75‑1 (MQ=255)                                                                                              gTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAg                                                                                                                                 >  7:300526/1‑75 (MQ=255)                                                                                                   gCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGc                                                   <  3:303599/148‑1 (MQ=255)                                                                                                      aaGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtg                                                                                               >  1:219933‑M1/1‑47 (MQ=255)                                                                                                      aaGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtg                                                                                               <  2:219933‑M1/101‑55 (MQ=255)                                                                                                      aaGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACCCCCCCGAACACACGTATCCCGTGGCTCCACCCCGCAGCGCACAAAACGGTGGGACCGGGCCCGCCCCCGCAACGGGCGGTGCAGGTACGACaccgcgtt                                               >  4:324673/1‑142 (MQ=255)                                                                                                       tccGTTACGCTGATCGGCGCTAG‑CCGGTCCCGGCCCCTTCGGGGCCACGCCCGCTCCCACAGGTCGCGCGTCGCTCTCGCGCGCAGGTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTg                                              <  3:44113/147‑1 (MQ=38)                                                                                                        gCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGa                                             <  6:147032/149‑1 (MQ=255)                                                                                                         cGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGAt                                            <  5:308061/149‑1 (MQ=255)                                                                                                                   aTCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGGGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCg                                   <  3:98624/148‑1 (MQ=255)                                                                                                                                     ccGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCaa                 <  4:116327/149‑1 (MQ=255)                                                                                                                                      cGGCCCCTGCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGtac                                                          <  1:283504/107‑1 (MQ=255)                                                                                                                                        gCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCa                           <  7:361776/136‑1 (MQ=255)                                                                                                                                        gCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGc              <  7:216542/149‑1 (MQ=255)                                                                                                                                                 ggggcgcgcccgcgcccactggtatgggcgctgcgcgcgagagcgacgcgctacctgtgggcgcgggcgtgcccgcgaaggggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagca     <  6:308061‑M1/148‑145 (MQ=255)                                                                                                                                                  gggCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTg                                              >  7:144898/1‑107 (MQ=255)                                                                                                                                                  gggCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCAAATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTg                                              <  8:144898/107‑1 (MQ=255)                                                                                                                                                    gCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCgcccgcgaaagggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcaccc  <  6:38614‑M2/149‑83 (MQ=255)                                                                                                                                                     |                                                                                                                                                    AAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGG‑GTGCTGCCGAAAGAGCAGC‑AGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTAT‑CCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGT  >  NC_002947/5816707‑5816999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.