New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5876984 =	59 (1.000)	3 (0.060)	3/208	NT	8.0%	intergenic (+6/+99)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	5877066 =	21 (0.440)					intergenic (+88/+17)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein

AGATCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCA  >  NC_002947/5876839‑5877125                                                                                                                                                   |                                                                                                                                              cgcaagggtttccaggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTc                                                                                                                                             >  7:198129‑M1/147‑149 (MQ=255)     agggtttccaggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCgg                                                                                                                                         >  3:291746‑M1/143‑149 (MQ=255)     agggtttccaggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgaccgactgatcgcctgtcagggcctgTTCGCgg                                                                                                                                         >  2:372048‑M1/143‑149 (MQ=255)      aCCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCggg                                                                                                                                        <  1:352029/148‑1 (MQ=255)        cAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTa                                                                                                                                      >  3:273330/1‑148 (MQ=255)         tttccaggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTa                                                                                                                                      <  8:15982‑M1/10‑1 (MQ=255)          aCCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAc                                                                                                                                   <  6:352144/149‑1 (MQ=255)           tccaggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAAc                                                                                                                                   <  4:167614‑M1/13‑1 (MQ=255)           cccGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAcc                                                                                                                                  >  6:115578/1‑149 (MQ=255)           cccGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAcc                                                                                                                                  <  6:15868/149‑1 (MQ=255)            ccaggggttgcaggcgacggtgccgcaggcggagggtattgcgatggatgaagcggggaccttttacctggtcagtgagccgaacctgttctatgtgttcaaggagccgactgactgatcgcgtgtcagggcctgTTCGCGGGTAAAc                                                                                                                                   >  6:120079‑M1/136‑148 (MQ=255)            ccaggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAAcc                                                                                                                                  <  4:197196‑M1/14‑1 (MQ=255)             caggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAAccc                                                                                                                                 <  4:208061‑M1/15‑1 (MQ=255)               ggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGc                                                                                                                               >  8:345500‑M1/133‑149 (MQ=255)               gTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTcgc                                                                                                                                           >  2:338626/1‑136 (MQ=255)               gTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTcgc                                                                                                                                           <  1:338626/136‑1 (MQ=255)                    gCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGc                                                                                                                               <  5:269551/143‑1 (MQ=255)                    gCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGc                                                                                                                               >  6:269551/1‑143 (MQ=255)                        gAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAgg                                                                                                                     >  1:238758/1‑149 (MQ=255)                        gAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAgg                                                                                                                     >  5:27191/1‑149 (MQ=255)                        gAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAg                                                                                                                      <  3:55865/148‑1 (MQ=255)                          aGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCGACAACGTa                                                                                                                   >  7:15982/1‑149 (MQ=255)                             gcAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTAccc                                                                                                                >  8:276417/1‑149 (MQ=255)                               aGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCa                                                                                                              >  3:356648/1‑149 (MQ=255)                               aGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCa                                                                                                              >  8:294/1‑149 (MQ=255)                                  tCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCg                                                                                                           <  4:356648/149‑1 (MQ=255)                                      cGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCt                                                                                                       <  4:348559/149‑1 (MQ=255)                                       gCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTg                                                                                                      >  7:157119/1‑149 (MQ=255)                                         cATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGa                                                                                                    <  8:180586/149‑1 (MQ=255)                                           tcgtcgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTa                                                                                                                   >  6:166813/1‑132 (MQ=255)                                           tcgtcgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTa                                                                                                                   <  5:166813/132‑1 (MQ=255)                                              tcgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGt                                                                                               <  6:27191/149‑1 (MQ=255)                                                ggCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTgg                                                                                             <  2:238758/149‑1 (MQ=255)                                                    tggtgACCAACGGCCTGTTCGCGGCGCGGCAGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGAt                                                                                         >  5:27171/1‑149 (MQ=255)                                                     ggtgACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACa                                                                                                                        <  4:77706/117‑1 (MQ=255)                                                     ggtgACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACa                                                                                                                        >  3:77706/1‑117 (MQ=255)                                                     ggtgACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATc                                                                                        >  2:22840/1‑149 (MQ=255)                                                      gtgACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATcc                                                                                       <  2:48655/149‑1 (MQ=255)                                                      gtgACCAACGGACTGTTCGAGTCGCGTCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGTGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATcc                                                                                       <  7:249937/149‑1 (MQ=255)                                                      gatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATc                                                                                        <  4:238190‑M1/56‑1 (MQ=255)                                                         aCCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTg                                                                                    <  7:276417/149‑1 (MQ=255)                                                           cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGGTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCGACCAGGTACCCCCCCGGCCGGGAACCGGGGCGCTcccgg                                                                                    >  5:366443/1‑145 (MQ=255)                                                           cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCATGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTg                                                                                    >  1:94510/1‑148 (MQ=255)                                                           cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTa                                                                                  <  5:12847/149‑1 (MQ=255)                                                                 cggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGc                                                                             >  3:238190‑M1/83‑149 (MQ=255)                                                                  ggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCg                                                                            >  6:157797‑M1/82‑149 (MQ=255)                                                                  cTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCgg                                                                           <  7:294/149‑1 (MQ=255)                                                                     ttCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCgg                                                                                                                                         >  7:258240/1‑84 (MQ=255)                                                                     ttCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCgg                                                                                                                                         <  8:258240/84‑1 (MQ=255)                                                                     ttCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGtt                                                                        <  6:27171/149‑1 (MQ=255)                                                                       cgcggcgcggCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGttt                                                                       <  4:273330/148‑1 (MQ=255)                                                                                    gcggATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATcc                                                                                       <  8:303640/119‑1 (MQ=255)                                                                                    gcggATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATcc                                                                                       >  7:303640/1‑119 (MQ=255)                                                                                     cggATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGTGCCAAACCCTCCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAgg                                                          <  1:312735/147‑1 (MQ=255)                                                                                     cggATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCCCTCCTACAAGGTACCCCCCCGGCCGGGCACCGTGGCGATCCCTGGAGGAGCGGGGTTTCCCGCGAACacg                                                          >  2:312735/1‑145 (MQ=255)                                                                                       gATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCt                                                      <  7:288048/149‑1 (MQ=255)                                                                                             ctgctgctgGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACa                                                  <  5:115578/147‑1 (MQ=255)                                                                                                ctgctgGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGa                                             <  8:157119/149‑1 (MQ=255)                                                                                                     gggCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCcgc                                                                 <  2:281554/124‑1 (MQ=255)                                                                                                     gggCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCcgc                                                                 >  1:281554/1‑124 (MQ=255)                                                                                                       gCACCGC‑TTAAGGCGTTACGAGCCTTAAGGCCGAGTAAAACCCTTCGCGGTAAAACCCGCTCCTACAAGGTACCCCACCGGCCTGCAACCGTGGCGATCCCTTTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca                                      <  7:138856/149‑1 (MQ=255)                                                                                                        cACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCCCGCCGACAAGGTACCCCCCCCGCCTGGCACCGTGGCGGTCCCGGTAGGAGCGGGGTTACCCGCGCACACGCCCGGACAGGCGCtgaggcag                                     >  6:131112/1‑149 (MQ=255)                                                                                                         aCCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCCCTCCAAAAAAGTAACCCACCCGCCGGGAACCCTGGCGATACCAGTAGGAGCGGGTTTAACCCCCAACACGCCCAGACAGGCGATcagtcagt                                    >  2:7335/1‑149 (MQ=255)                                                                                                             ggtGAAGGCGTGAATAGCCTTTTGGCTGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGTTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCgg                                 <  8:178321/147‑1 (MQ=38)                                                                                                                gAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagt                                        >  1:72047/1‑139 (MQ=255)                                                                                                                gAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagt                                        <  2:72047/139‑1 (MQ=255)                                                                                                                   ggCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCtt                           <  5:131112/149‑1 (MQ=255)                                                                                                                      gTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa                        <  2:94510/149‑1 (MQ=255)                                                                                                                         aaGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAaca                      <  1:22840/148‑1 (MQ=255)                                                                                                                             gCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGt                                                                         <  4:4436/93‑1 (MQ=255)                                                                                                                             gCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGt                                                                         >  3:4436/1‑93 (MQ=255)                                                                                                                                    ggCCGAGAAAAACCCTGCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAAc              <  1:369914/145‑1 (MQ=255)                                                                                                                                             aaaCCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCa  <  4:227186/148‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                              AGATCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGC‑TGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCA  >  NC_002947/5876839‑5877125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.