New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1431709 =	51 (0.860)	3 (0.050)	3/244	NT	5.7%	coding (163/336 nt)	PP_1253	ArsR family transcriptional regulator
	?	NC_002947	1431746 =	51 (0.910)					coding (126/336 nt)	PP_1253	ArsR family transcriptional regulator

CAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTGCCATAGTTCGATTATGATCGAAC  >  NC_002947/1431599‑1431890                                                                                                                                                     |                                                                                                                                                 cccccgttatcatggcaaccatgcgagcctataaacatcccaaccccgacgacctcattcttgaacgcctgctctatgcgctcagcgaccccgtgcgcctggaaatcgtcCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGa                                                                                                                                                 >  7:2664‑M1/111‑149 (MQ=255) cAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGa                                                                                                                                                 <  7:43456/149‑1 (MQ=255)        ttCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTc                                                                                                                                          <  4:157900/149‑1 (MQ=255)           atatGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAg                                                                                                                                       >  5:186515/1‑149 (MQ=255)                 gTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCAc                                                                                                                                 >  7:69854/1‑149 (MQ=255)                    gTCCCCAGATTGCGGGTTTGCACCAGCCCTGGATCACGCAACACACGGAAGTGGTGGGACATGCTCGAGTTCGGCCGACCTCCATCCAGCTCGACACAGCTGGCCTCGGCCACGCGGGCCAGGTG‑GCTGACGATTTCCAGGCGCACggg                                                                                                                              <  6:232269/149‑1 (MQ=255)                       cccACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTc                                                                                                                           >  4:272900/1‑149 (MQ=255)                       cccACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTc                                                                                                                           >  4:155770/1‑149 (MQ=255)                       cccACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTc                                                                                                                           >  4:55871/1‑149 (MQ=255)                               gCGGGTTTGCACCAGCCCTGCATCACGCAACACTCGGAAGTGGTGGTACATGCGCGACTTCGGCCGACCTCCATGCAGCTCGCCACAGCTGGCCGCGGCCACGCCTGGCAGGTG‑GCGGACGATTTCCAGGCGCACGTGGTCGCTGAgc                                                                                                                    <  4:37037/148‑1 (MQ=255)                                  aacatcccaaccccgacgacctcattcttgaacgcctgctctatgcgctcagcgaccccgtgcgcctggaaatcgtcCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGAc                                                                                                                                                >  6:387700‑M1/78‑117 (MQ=255)                                  aacatcccaaccccgacgacctcattcttgaacgcctgctctatgcgctcagcgaccccgtgcgcctggaaatcgtcCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGAc                                                                                                                                                <  5:387700‑M1/40‑1 (MQ=255)                                   gTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCa                                                                                                                 >  2:29961/1‑147 (MQ=255)                                       gCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATagag                                                                                                            >  2:214203/1‑148 (MQ=255)                                       gCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATagag                                                                                                            >  3:7812/1‑148 (MQ=255)                                        cACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCa                                                                                                          <  5:64651/149‑1 (MQ=255)                                              cccTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGt                                                                                                     >  4:35335/1‑148 (MQ=255)                                                   cATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAg                                                                                                         <  1:161847/139‑1 (MQ=255)                                                   cATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAg                                                                                                         >  2:161847/1‑139 (MQ=255)                                                    aTCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGaa                                                                                              <  8:6215/149‑1 (MQ=255)                                                            acacacGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGgtcg                                                                                      >  8:40411/1‑149 (MQ=255)                                                                  ggAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCgggg                                                                                >  5:199404/1‑149 (MQ=255)                                                                       tggtggGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTggg                                                                           <  6:186515/149‑1 (MQ=255)                                                                         gtggGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGAt                                                                         >  2:168178/1‑149 (MQ=255)                                                                          tggGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATg                                                                        <  7:40411/149‑1 (MQ=255)                                                                            ggACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTGAACGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGt                                                                       >  1:117148/1‑149 (MQ=255)                                                                            ggACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCTAGAATGAGGTCGTCGGGGTTGGGATGtt                                                                      <  1:214203/149‑1 (MQ=255)                                                                             gACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGttt                                                                     <  3:161311/149‑1 (MQ=255)                                                                               cATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTtat                                                                   <  8:69854/149‑1 (MQ=255)                                                                               cATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTtat                                                                   <  3:55871/149‑1 (MQ=255)                                                                                aTGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTtata                                                                  <  3:272900/149‑1 (MQ=255)                                                                                 tGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAg                                                                 <  4:7812/149‑1 (MQ=255)                                                                                  gCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGa                                                                          >  6:127848/1‑139 (MQ=255)                                                                                  gCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGa                                                                          <  5:127848/139‑1 (MQ=255)                                                                                    tCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAg                                                                                                         >  6:266125/1‑106 (MQ=255)                                                                                    tCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAg                                                                                                         <  5:266125/106‑1 (MQ=255)                                                                                         ttCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCAt                                                         >  1:21000/1‑149 (MQ=255)                                                                                           cGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATg                                                        <  6:199404/148‑1 (MQ=255)                                                                                              ccGACCTCCATCCAGCTCGCCACAGCAGGCCTCGGCCACGCCGGCCAGGTG‑GCGGCCGAATTCCAGGCGCACGGGTTCGCTGAGCGCATAGAGCAGTCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATATGCTCGCATGGtt                                                     >  2:348164/1‑148 (MQ=255)                                                                                                   cTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATg                                               <  3:155770/149‑1 (MQ=255)                                                                                                      catccaGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGAt                                             >  7:156829/1‑148 (MQ=255)                                                                                                           aGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGa                                                                                                                      >  5:339180/1‑70 (MQ=255)                                                                                                           aGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGa                                                                                                                      <  6:339180/70‑1 (MQ=255)                                                                                                           aGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACggg                                       >  8:177604/1‑149 (MQ=255)                                                                                                            gCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACgggg                                      <  3:35335/149‑1 (MQ=255)                                                                                                             gtccgccacctggccggcgtggccgaggccagctgtggcgGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGtt                                                                      >  6:387700‑M2/41‑117 (MQ=255)                                                                                                             gtccgccacctggccggcgtggccgaggccagctgtggcgGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGtt                                                                      <  5:387700‑M2/77‑1 (MQ=255)                                                                                                              tccgccacctggccggcgtggccgaggccagctgtggcgGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGCCATGATAACggggg                                     >  7:2664‑M2/40‑149 (MQ=255)                                                                                                              tCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGt                                    >  1:305439/1‑149 (MQ=255)                                                                                                                 CCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCgg                                                                                  >  4:83967‑M1/1‑100 (MQ=255)                                                                                                                 CCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCgg                                                                                  <  3:83967‑M1/100‑1 (MQ=255)                                                                                                                   ACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCAt                               >  7:177604‑M1/1‑149 (MQ=255)                                                                                                                   ACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCAt                               <  6:275668‑M1/149‑1 (MQ=255)                                                                                                                     aGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTa                             <  8:156829/149‑1 (MQ=255)                                                                                                                        tGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAAtt                          >  2:368225/1‑149 (MQ=255)                                                                                                                           ccTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTGc                        >  7:250594/1‑148 (MQ=255)                                                                                                                            cTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGTGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTGCCa                      >  3:95394/1‑149 (MQ=255)                                                                                                                            cTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTGCCa                      >  8:323153/1‑149 (MQ=255)                                                                                                                               ggCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTTGGATGTTTATAGGCTCGCATGGTTGACATGATAACAGGGGTTTCATTAATTGCCATa                    <  2:117148/148‑1 (MQ=255)                                                                                                                                   aCGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTGCCATAGTTc                >  3:107441/1‑148 (MQ=255)                                                                                                                                    cGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTGCCATAGTTCGa              <  2:305439/149‑1 (MQ=255)                                                                                                                                      ccGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTGCCATAGTTCGAtt            <  1:29961/149‑1 (MQ=255)                                                                                                                                         gCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTGCCATAGTTCGATTAt          >  3:229167/1‑148 (MQ=255)                                                                                                                                            aGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTg                         >  6:350646/1‑130 (MQ=255)                                                                                                                                            aGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTg                         <  5:350646/130‑1 (MQ=255)                                                                                                                                                     gACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTGCCATAGTTCGATTATGATCGaac  >  4:258298/1‑145 (MQ=255)                                                                                                                                                     gACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTGCCATAGTTCGATTATGATCGaac  <  3:258298/145‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 CAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACAGCTGGCCTCGGCCACGCCGGCCAGGTG‑GCGGACGATTTCCAGGCGCACGGGGTCGCTGAGCGCATAGAGCAGGCGTTCAAGAATGAGGTCGTCGGGGTTGGGATGTTTATAGGCTCGCATGGTTGACATGATAACGGGGGTTTCATTAATTGCCATAGTTCGATTATGATCGAAC  >  NC_002947/1431599‑1431890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.