New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2438704 | 52 (0.880) | 3 (0.050) | 3/252 | NT | 5.3% | coding (1624/2148 nt) | fadB | enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase |
? | NC_002947 | = 2438735 | 55 (0.950) | coding (1655/2148 nt) | fadB | enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase |
CCGTACTTTGGCGGTTTTGCCAAGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGACAAGCGCGGCAAGCC > NC_002947/2438596‑2438879 | ccGTACTTTGGCGGTTTTGCCAAGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACg > 6:166734/1‑148 (MQ=255) ccGTACTTTGGCGGTTTTGCCAAGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGt < 1:120233/149‑1 (MQ=255) ggCGGTTTTGCCAAGCTGGTCAGCGCCGGTGTCGAATTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCg > 4:223391/1‑148 (MQ=255) gCGGTTTTGCCAAGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGaa < 3:50886/149‑1 (MQ=255) gTTTTGCCAAGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGc > 6:38590/1‑149 (MQ=255) ttttGCCAAGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCt < 6:386064/149‑1 (MQ=255) gCCAAGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTg > 3:20840/1‑127 (MQ=255) gCCAAGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTg < 4:20840/127‑1 (MQ=255) gCCAAGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTcc < 5:268660/148‑1 (MQ=255) aGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGAt < 4:117742/149‑1 (MQ=255) aGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGAt < 6:102845/149‑1 (MQ=255) aGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGAt > 3:280952/1‑149 (MQ=255) ggTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTccc > 5:119010/1‑141 (MQ=255) ggTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTccc < 6:119010/141‑1 (MQ=255) gTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCa < 4:205461/148‑1 (MQ=255) cAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGa < 6:332373/149‑1 (MQ=255) aGCGCCGGTGTCGAATTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGaa < 3:223391/149‑1 (MQ=255) cGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACg < 4:305755/149‑1 (MQ=255) cGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCAAATGCTTCCCGGATCGCATGAAGGAc > 2:193910/1‑148 (MQ=255) ggTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGa < 5:38590/149‑1 (MQ=255) ttCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTc > 7:144501/1‑149 (MQ=255) cGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCgg > 1:59819/1‑149 (MQ=255) gTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGa < 2:310182/137‑1 (MQ=255) gTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCgg < 5:166734/148‑1 (MQ=255) gcgcATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAg > 2:350603/1‑149 (MQ=255) gACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGAcgc > 8:322446/1‑149 (MQ=255) ggTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGAcgcgatc > 5:172054/1‑145 (MQ=255) cATGGCGCAGGTCGGCTGGCCGATGGGCCCAGCCTTCTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACg < 4:75272/149‑1 (MQ=255) ctGGAGCAGGTCCGCGGGCCGATGGGCCCAGCCTTCTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCGCGGCAGTCGACGCGTTGTACg < 4:80480/147‑1 (MQ=255) aTGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGGTCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTAc > 1:313989/1‑147 (MQ=255) aTGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTAc > 2:195688/1‑147 (MQ=255) aTGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGa < 7:322446/149‑1 (MQ=255) aTGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGa < 2:59819/149‑1 (MQ=255) ttCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCg > 1:217938/1‑149 (MQ=255) gCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGc < 4:280952/148‑1 (MQ=255) gATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGa > 8:104293/1‑129 (MQ=255) gATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGa < 7:104293/129‑1 (MQ=255) aTGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGGTCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCagaa < 2:313989/149‑1 (MQ=255) aTGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCagaa < 5:203474/149‑1 (MQ=255) ccTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAg > 6:193245/1‑83 (MQ=255) ccTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAg < 5:193245/83‑1 (MQ=255) aCTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGccatcaagtaggctgggcccatcggccagccgaacttctccatgaccttgtcgatgcgcacgaagtcgacaccggcgctgaccagcttggcaaaaccgccaaagtacgg < 4:106135‑M2/149‑110 (MQ=255) gATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTc > 5:78/1‑148 (MQ=255) gACGTGGTCGGCATCGACACCGGCCACCACGGccatcaagtaggctgggcccatcg < 5:363149‑M2/56‑25 (MQ=255) gACGTGGTCGGCATCGACACCGGCCACCACGGccatcaagtaggctgggcccatcg > 6:363149‑M2/1‑32 (MQ=255) tGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTAc < 1:350603/149‑1 (MQ=255) gTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCAAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGa < 1:193910/149‑1 (MQ=255) tCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGa > 3:159380/1‑148 (MQ=255) ggCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAAc < 6:172054/149‑1 (MQ=255) cATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCg < 2:217938/149‑1 (MQ=255) gACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGAc > 7:138581/1‑147 (MQ=255) acacCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGACAAg > 1:140349/1‑149 (MQ=255) cGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGACAAGcgcg > 4:91494/1‑149 (MQ=255) gCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGACAAGCGCgg > 5:340477/1‑148 (MQ=255) gCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGACAAGCGCgg > 5:27015/1‑148 (MQ=255) gCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGCCTTCTACTCCTACGAAACCGACAAGCGCgg > 7:107356/1‑148 (MQ=255) caccacGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGACAAGCGCGGc > 7:72905/1‑147 (MQ=255) accacGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGACAAGCGCGGCAAg > 2:134104/1‑149 (MQ=255) accacGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGACAAGCGCGGCAAg < 4:159380/149‑1 (MQ=255) accacGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTAGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGACAAGCGCGGCAAg > 1:155495/1‑149 (MQ=255) acGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGACAAGCGCGGCAAGcc > 6:170522/1‑148 (MQ=255) | CCGTACTTTGGCGGTTTTGCCAAGCTGGTCAGCGCCGGTGTCGACTTCGTGCGCATCGACAAGGTCATGGAGAAGTTCGGCTGGCCGATGGGCCCAGCCTACTTGATGGACGTGGTCGGCATCGACACCGGCCACCACGGCCGTGACGTCATGGCCGAAGGCTTCCCGGATCGCATGAAGGACGAGCGCCGCTCGGCAGTCGACGCGTTGTACGAGGCCAACCGCCTGGGCCAGAAGAACGGTAAGGGCTTCTACGCCTACGAAACCGACAAGCGCGGCAAGCC > NC_002947/2438596‑2438879 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |