New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2873638 =	69 (1.170)	5 (0.090)	5/254	NT	7.0%	coding (418/474 nt)	cigR	membrane protein
	?	NC_002947	2873658 =	65 (1.110)					coding (438/474 nt)	cigR	membrane protein

TTCAGAAGAACCTGGCCCGCGGCAAGCCCCTGCCACCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACGGCCTATCAACGCTGCCGTAACACCGCGGCCAGCC  >  NC_002947/2873510‑2873804                                                                                                                                                     |                                                                                                                                                   ttCAGAAGAACCTGGCCCGCGGCAAGCCCCTGCCACCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCggg                                                                                                                                                    <  5:288615/149‑1 (MQ=255)      ccgacccTGGCCCGCGGCCAGCCCCTGCCACCTGGTATCGCCAAGACGCTGGAGGGTCCGCTGGTGGGGCAGCTGCCGCACTACGACGGGTATGAGGGGAGGCAAGCGGGCGCAGACCTGATCCCGGTCGCCACGGCGACCAGAatcag                                                                                                                                               <  6:278515/144‑2 (MQ=255)           ccTGGCCCGCGGCAAGCCCCTGCCACCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTAt                                                                                                                                           >  2:192577/1‑148 (MQ=255)            cTGGCCCGCGGCAAGCCCCTGCCACCTTGTATCGCCAAGAAGCTGGATGGTCGTGTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGa                                                                                                                                         <  8:329212/149‑1 (MQ=255)             ggccgttgggctgctgcgcagcccatcgcaggcacgccagcgcctgcagggaccgagcggactgcgcgcacctgcggccttagtcgaatgccccgttcaacacctcatagctgatcccggtcgccgtggcgaccggGATCATCTATGAg                                                                                                                                        <  3:46561‑M2/13‑1 (MQ=255)               gCCCGCGGCAAGCCCCTGCCACCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAg                                                                                                                                        <  5:134157/147‑1 (MQ=255)                       cAAGCCCCTGCCACCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGTGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACg                                                                                                                              <  8:323620/149‑1 (MQ=255)                         aGCCCCTGCCACCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACggg                                                                                                                            <  4:229837/149‑1 (MQ=255)                         aGCCCCTGCCACCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACggg                                                                                                                            <  6:243150/149‑1 (MQ=255)                         aGCCCCTGCCACCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACggg                                                                                                                            <  1:192577/149‑1 (MQ=255)                         aGCCCCTGCCACCTGGTATCGCCAAGAAGCTGGATGGTCGGCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACggg                                                                                                                            <  5:375511/149‑1 (MQ=255)                            cccTGCCACCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGGTGACCGGGGCa                                                                                                                         >  4:196383/1‑149 (MQ=255)                                   aCCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGAc                                                                                                                   >  6:138935/1‑148 (MQ=255)                                   aCCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGAc                                                                                                                   >  5:133933/1‑148 (MQ=255)                                        gTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGc                                                                                                             >  5:291390/1‑149 (MQ=255)                                             gCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAg                                                                                                        <  3:330767/149‑1 (MQ=255)                                              ccAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAgg                                                                                                       >  8:294567/1‑149 (MQ=255)                                                  cagcgcctgcagggaccgagcggactgctcgcacctgcggccttagtcgaatgccccgttcaacacctcatagatgatcCCGGTGGCCACGGCGCCCAGGATGATCGATGAGGTGTTGAACGGGGCATTCGACTAAggccgcaagctcg                                                                                                   <  6:123831‑M1/70‑7 (MQ=255)                                                  cagcgccggcagggaccgagcgcactgctcgcacctgcggccttagtcgaaggccccgtgcaacacctcatagatgatcCCGGTCGCCACGGCGACCAGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGc                                                                                                          >  5:123831‑M1/80‑142 (MQ=255)                                                   agcgcctgcagggaccgagcggactgctcgcacctgcggccttagtcgaatgccccgttcaacacctcatagatgatcctggtcgccgtggcgaccggGATCATCTATGAGGTGTTGAACGGGGCATTc                                                                                                                      <  6:273633‑M2/31‑1 (MQ=255)                                                   agcgcctgcagggaccgagcggactgctcgcacctgcggccttagtcgaatgccccgttcaacacctcatagatgatcctggtcgccgtggcgaccggGATCATCTATGAGGTGTTGAACGGGGCATTc                                                                                                                      >  5:273633‑M2/99‑129 (MQ=255)                                                   aagCTGGATGGTCGTCTGTTGGGGCAGCTGCCGCACTACGACGGGTATGAGGGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGa                                                                                                  <  6:288303/149‑1 (MQ=255)                                                     gCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGCCCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAg                                                                                                 >  6:233947/1‑148 (MQ=255)                                                     gCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTa                                                                                                                 <  1:148499/132‑1 (MQ=255)                                                     gCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAg                                                                                                 >  2:59502/1‑148 (MQ=255)                                                       tGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAg                                                                                              >  1:328419/1‑149 (MQ=255)                                                        ggATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAg                                                                                                        >  7:67386/1‑138 (MQ=255)                                                        ggATGGGCGTCTGTTGTGGCAGCTGCCTCACTACGACGGGTCTGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGGCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAg                                                                                                        <  8:67386/138‑1 (MQ=255)                                                         gATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACAGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTc                                                                                            >  1:101664/1‑149 (MQ=255)                                                           tGGTCGTCTGTTGGGGCAGCTGCCTCACTTCGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGtt                                                                                                                                   <  5:268116/108‑1 (MQ=255)                                                           tGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGtt                                                                                                                                   >  4:164815/1‑108 (MQ=255)                                                           tGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGtt                                                                                                                                   <  3:164815/108‑1 (MQ=255)                                                           tGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGtt                                                                                                                                   >  6:268116/1‑108 (MQ=255)                                                              tcgtcTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTc                                                                                                                      >  4:247840/1‑118 (MQ=255)                                                              tcgtcTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTc                                                                                                                      <  3:247840/118‑1 (MQ=255)                                                              tcgtcTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTc                                                                                       >  2:234933/1‑149 (MQ=255)                                                                     ttGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCt                                                                                <  7:294567/149‑1 (MQ=255)                                                                      tgaggCAGCTGCCCCAACA‑GACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGc                                                                              <  8:345159/146‑1 (MQ=255)                                                                        gggCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTg                                                                               >  7:144374/1‑147 (MQ=255)                                                                          gCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACg                                                                                                                              <  3:14001/98‑1 (MQ=255)                                                                          gCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACg                                                                                                                              >  4:14001/1‑98 (MQ=255)                                                                            aGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGgcg                                                                         <  5:97474/149‑1 (MQ=255)                                                                               tGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCACTGGAGACAGGCATAATCTATGAGGTGTTGAACGGCGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCAGCTCGGTCCCTGCAGGCGCTg                                                                      >  5:273150/1‑149 (MQ=255)                                                                               cgagcttgcggccttagtcgaatgccccgttcaacacctcatcgatcatcctgggcgccgtggccaccggGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTg                                                                      <  6:123831‑M2/79‑1 (MQ=255)                                                                                 ccTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACgg                                                                                                                             <  4:197281/92‑1 (MQ=255)                                                                                 ccTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACgg                                                                                                                             >  3:197281/1‑92 (MQ=255)                                                                                 ccTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTg                                                                      <  6:291390/147‑1 (MQ=255)                                                                                   tCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGt                                                                  >  5:346359/1‑149 (MQ=255)                                                                                   tCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGt                                                                  >  6:269323/1‑149 (MQ=255)                                                                                   tCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGt                                                                  >  7:309902/1‑149 (MQ=255)                                                                                     aCTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGGTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGt                                                                  <  3:196383/147‑1 (MQ=255)                                                                                      gcggccttagtcgaatgccccgttcaacacctcatagatgatcctggtcgccgtggcgaccggGATCATCTATGAGGTGTTGCACGGGGCCTTCGACTAAGGCCGCAGGTGCGAGCAGTGCGCTCGGTCCCTGCCGGCGCTg                                                                      >  5:123831‑M2/64‑142 (MQ=255)                                                                                      cTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGcc                                                               <  7:316966/149‑1 (MQ=255)                                                                                       tACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCt                                                              >  5:169436/1‑149 (MQ=255)                                                                                            cgGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTg                                                                      <  6:21074/136‑1 (MQ=255)                                                                                            cgGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTg                                                                      >  5:21074/1‑136 (MQ=255)                                                                                               gTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGTTggg                                                      >  7:362049/1‑149 (MQ=255)                                                                                                  gaatgccccgttcaacacctcatagatgatcCCGGTCGCCACGGCGACCAGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCt                                                                       <  6:273633‑M1/98‑1 (MQ=255)                                                                                                  gaatgccccgttcaacacctcatagatgatcCCGGTCGCCACGGCGACCAGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCt                                                                       >  5:273633‑M1/32‑129 (MQ=255)                                                                                                      tGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCgca                                               <  2:328419/149‑1 (MQ=255)                                                                                                            cAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGcc                                         >  6:14952/1‑149 (MQ=255)                                                                                                               gCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTc                                                                                       <  8:338605/100‑1 (MQ=255)                                                                                                               gCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTc                                                                                       >  7:338605/1‑100 (MQ=255)                                                                                                                 gggCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACg                                    <  5:14952/149‑1 (MQ=255)                                                                                                                 gggCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGGTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCTGCGCAGCCCATCg                                    <  8:144374/149‑1 (MQ=255)                                                                                                                   gcgcAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGTTGGGCTGCTGCGCAGCCCATCgca                                  <  8:362049/149‑3 (MQ=255)                                                                                                                   gcgcAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCTGCGCAGCCCATCgca                                  <  6:169436/149‑3 (MQ=255)                                                                                                                    ctcatagatgatcCCGGTCGCCACGGCGACCGGGATCAGCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGCGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACGGcc                                 <  3:46561‑M1/136‑1 (MQ=255)                                                                                                                    cgcAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCTATGGGCTGCGCAGCAGCCCAACGGcc                                 <  6:133933/149‑1 (MQ=255)                                                                                                                      cAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACGGCCTa                               <  5:138935/149‑1 (MQ=255)                                                                                                                        gACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGTTGCGCAGCAGCCCAACGGCCTATc                             <  1:59502/149‑1 (MQ=255)                                                                                                                           cTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCCGCCCAACGGCCTATCAAc                          >  8:147087/1‑149 (MQ=255)                                                                                                                                   ggTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGTAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACGGCCTATCAACGCTGCCg                   >  3:357543/1‑148 (MQ=255)                                                                                                                                    gTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACGGCCTATCAACGCTGcc                    <  5:269323/146‑1 (MQ=255)                                                                                                                                      cGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGGTGCGCAGCAGCCCAACGGCCTATCAACGCTGCCGTAac               <  5:233947/149‑1 (MQ=255)                                                                                                                                        ccGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACGGCCTATCAACGCTGCCGTAacac             >  4:89018/1‑149 (MQ=255)                                                                                                                                            ggCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACGGCCTATCAACGCTGCCGTAACACcgcg         <  7:147087/149‑1 (MQ=255)                                                                                                                                                  cGGGATCATCTATGAGGTGTTTAACGGGGCATTCGACTAAGGCGGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACGGCCTATCAACGCTGCCGTAACACCGCGGCCAGc   <  4:46561/149‑1 (MQ=255)                                                                                                                                                  cGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACGGCCTATCAACGCTGCCGTAACACCGCGGCCAGc   <  1:234933/149‑1 (MQ=255)                                                                                                                                                    gGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACGGCCTATCAACGCTGCCGTAACACCGCGGCCAGcc  >  7:330777‑M2/2‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TTCAGAAGAACCTGGCCCGCGGCAAGCCCCTGCCACCTGGTATCGCCAAGAAGCTGGATGGTCGTCTGTTGGGGCAGCTGCCTCACTACGACGGGTATGAGTGGATGCAAGCGGGCGCAGACCTGATTCTGGTCGCCGTGGCGACCGGGATCATCTATGAGGTGTTGAACGGGGCATTCGACTAAGGCCGCAGGTGCGAGCAGTCCGCTCGGTCCCTGCAGGCGCTGGCGTGCCTGCGATGGGCTGCGCAGCAGCCCAACGGCCTATCAACGCTGCCGTAACACCGCGGCCAGCC  >  NC_002947/2873510‑2873804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.