New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2987604 =	NA (NA)	3 (0.050)	3/242	NT	NA	coding (795/2991 nt)	PP_2612	membrane protein
	?	NC_002947	2987647 =	NA (NA)					coding (752/2991 nt)	PP_2612	membrane protein

CGCAGTTGATGCTGGTAGGCCGAGACAGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCGCCACCACCACTGGCACTTTCGGCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTTGCCGATGGGCAAGGTTTC  >  NC_002947/2987623‑2987771                         |                                                                                                                             cggaGTTGATGCTGCTAGGGCGAGACAGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGGCGGCGAGCGCCACCACCACTGGCACTTTCGGCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTGGCCGATGGGCAAGGTTTc  <  6:75175/146‑1 (MQ=1)                         |                                                                                                                             CGCAGTTGATGCTGGTAGGCCGAGACAGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCGCCACCACCACTGGCACTTTCGGCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTTGCCGATGGGCAAGGTTTC  >  NC_002947/2987623‑2987771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.