New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3156837 | 49 (0.830) | 3 (0.050) | 3/248 | NT | 5.9% | coding (622/1188 nt) | PP_2772 | monooxygenase |
? | NC_002947 | = 3156867 | 48 (0.840) | coding (592/1188 nt) | PP_2772 | monooxygenase |
CTTCGGTGATACCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGTCGCTGGCGCCTGA > NC_002947/3156723‑3157014 | cTTCGGTGATACCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTgtcg < 7:320412‑M2/149‑5 (MQ=255) cTTCGGTGATACCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTgtcg < 7:53184‑M2/149‑5 (MQ=255) ggTGATACCCAGGAACACGTTGGCGAAATGCAACGGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGGTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCt < 5:116408/149‑1 (MQ=255) gTGATACCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTg < 6:141239/149‑1 (MQ=255) gATACCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGgc < 6:290347/149‑1 (MQ=255) tACCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGgcgc > 4:345254/1‑149 (MQ=255) aCCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCt > 1:232976/1‑149 (MQ=255) cccAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCt < 8:53184/148‑1 (MQ=255) cccAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCCGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTg > 2:254377/1‑149 (MQ=255) cAGGAACACGTTGGCGAAATGCAACTGCGCGATCATCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGc > 1:248565/1‑149 (MQ=255) cAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGc > 2:257197/1‑149 (MQ=255) acacGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCAtg < 7:156381/149‑1 (MQ=255) acGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCAtgtt < 1:257197/149‑1 (MQ=255) gTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCAtgttgt < 7:130064/149‑1 (MQ=255) gAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCCGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGt < 1:254377/149‑1 (MQ=255) tGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGtcatc < 3:302680/149‑1 (MQ=255) aaCTGCGCGACCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATg > 8:313779/1‑149 (MQ=255) cgcgATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAgtg < 8:320412/149‑1 (MQ=255) gcgATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAgtgt < 1:257084/149‑1 (MQ=255) aTCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGa > 5:313995/1‑148 (MQ=255) tCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATa < 3:157798/149‑1 (MQ=255) cAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATAc > 4:73818/1‑149 (MQ=255) gCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATAc < 7:71343/147‑1 (MQ=255) gCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATAc > 8:71343/1‑147 (MQ=255) ggCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTc < 2:248565/149‑1 (MQ=255) gcAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCgg > 6:157156/1‑149 (MQ=255) cAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGc < 3:73818/149‑1 (MQ=255) gCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTgg < 8:143007/148‑1 (MQ=255) gCGAAGGGGGTGCGCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTgg < 6:31329/148‑1 (MQ=255) aGGGGGTGCTCAGTGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATg < 2:19878/149‑1 (MQ=255) gggggTGCTCAGGGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGGTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATgg < 2:232976/149‑1 (MQ=255) ggTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAg > 8:4710/1‑149 (MQ=255) aGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATc < 3:345254/147‑1 (MQ=255) ccGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGCAACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAg > 1:68476/1‑137 (MQ=255) ccGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAg < 2:68476/136‑1 (MQ=255) ccGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCtt < 7:4710/149‑1 (MQ=255) aGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACt < 3:319427/149‑1 (MQ=255) gCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACtt > 2:238216/1‑149 (MQ=255) cATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACttt < 6:313995/149‑1 (MQ=255) tctcGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTc > 2:289137/1‑148 (MQ=255) gTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCa > 1:256338/1‑115 (MQ=255) gTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCa < 2:256338/115‑1 (MQ=255) gTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGa > 3:81227/1‑149 (MQ=255) ctTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTgtcgaagagaacgagatgcttctcgaccccggcccgctgagcacccccttcgccagcctgcgcccgctgatcgcgcagtt < 6:85300‑M2/117‑81 (MQ=255) ctTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTgtcgaagagaacgagatgcttctcgaccccggcccgctgagcacccccttcgccagcctgcgcccgctgatcgcgcagtt > 5:85300‑M2/1‑37 (MQ=255) ttCGACGCGC‑GCGCGCTCGAAAGTCGCGCTGCCGCTgtcgaagagaacgagatgcttctcgaccccggcccgctgagcacccccttcgccagcctgcgcccgctgatcgcgcagttgcatttcgccaacgtgttcctgggtatcaccg < 7:100663‑M2/148‑113 (MQ=255) ttCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGACTGCag > 1:27548/1‑149 (MQ=255) ttCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTACAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGACTg > 4:314028/1‑146 (MQ=255) gAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTcc > 2:93325/1‑148 (MQ=255) aGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGt < 3:314028/149‑1 (MQ=255) gTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAGACAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGt < 1:289137/149‑1 (MQ=255) gTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGTc < 2:27548/149‑1 (MQ=255) tCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGTCg > 4:317312/1‑149 (MQ=255) gCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATc < 4:242470/85‑1 (MQ=255) gCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCAGGGGATGGCAGCGATc > 3:242470/1‑85 (MQ=255) ccGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGTCGCTGgcgc < 8:140302/148‑1 (MQ=255) cGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGTCGCTGGCGCCt < 5:157156/149‑1 (MQ=255) cTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGTCGCTGGCGCCTGa < 3:317312/149‑1 (MQ=255) | CTTCGGTGATACCCAGGAACACGTTGGCGAAATGCAACTGCGCGATCAGCGGGCGCAGGCTGGCGAAGGGGGTGCTCAGCGGGCCGGGGTCGAGAAGCATCTCGTTCTCTTCGACGCGC‑ACGCGCTCGAAAGTCGCGCTGCCGCTGTCGGTCTGGCGCTGGCCCATGTTGTTCCAGTCATCATGCAGTGTGATACCGGTCCGGCCGCTGGGGATGGCAGCGATCAG‑CAGCTTGCCGCCAGCACTTTCATCGACTGCAGAGGCAATCAGCATTTCCGAGTCGCTGGCGCCTGA > NC_002947/3156723‑3157014 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |