New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5477130	24 (0.410)	15 (0.370)	10/174	NT	41.5%	intergenic (+43/+69)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
	?	NC_002947	= 5477147	26 (0.650)					intergenic (+60/+52)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein

GCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTC  >  NC_002947/5477003‑5477294                                                                                                                                                  |                                                                                                                                                     gCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgta                                                                                                                                                  <  8:334247‑M2/149‑5 (MQ=255) gCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgta                                                                                                                                                  >  8:143774‑M2/1‑145 (MQ=255)  cTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtag                                                                                                                                                 >  7:362421‑M2/1‑144 (MQ=255)     gtgtTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggag                                                                                                                                              <  4:310791‑M2/149‑9 (MQ=255)     gtgtTGCCGGCATGCGTGGCGCTGCTGGCGTTCATCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggag                                                                                                                                              <  2:296932‑M2/149‑9 (MQ=255)      tgtTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagc                                                                                                                                             >  8:53677‑M2/1‑140 (MQ=255)      tgtTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagc                                                                                                                                             >  2:201717‑M2/1‑140 (MQ=255)      tgtTGCCGGCATGCGTGGCGCTGCTGGCGTTCCTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagc                                                                                                                                             >  1:296932‑M2/1‑140 (MQ=255)           ccGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtt                                                                                                                                        <  4:93187‑M2/149‑15 (MQ=255)           ccGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggt                                                                                                                                         >  3:145175‑M2/1‑135 (MQ=255)                   cGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGCGATCGCGCTTATcgtaggagcgggtttacccgc                                                                                                                                 >  1:51690‑M2/1‑128 (MQ=255)                     tGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaa                                                                                                                              >  7:334247‑M2/1‑125 (MQ=255)                     gggcGCTGCTGGCGTTCTCGCCCTTGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaa                                                                                                                              >  4:310469‑M2/2‑125 (MQ=255)                       gcgcTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTAGAGGGTAAAACCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacacgcgaa                                                                                                                              <  6:197136‑M2/147‑25 (MQ=255)                         gctgctGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGCTGGCCACGTATCAATATTGATGCTGCCTGTGCCGGCCTATTCGCGGCTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaatagg                                                                                                                          >  6:281386‑M2/1‑121 (MQ=255)                          ctgctgGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggc                                                                                                                         >  2:141969‑M2/1‑120 (MQ=255)                           tgctgGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GCTCGCGCTTATcgtaggagcggggttacccgcgaataggcc                                                                                                                        <  8:101450‑M2/149‑31 (MQ=255)                                  gTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTAGCGGGTAAACCCGGGGCTACGCCCGG‑GATCGCGCGTATggtaggtgcggggtttaccgcgaatagggcgggacag                                                                                                                 <  7:319544‑M2/149‑38 (MQ=255)                                     cttcGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggc                                                                                                               >  3:93187‑M2/1‑109 (MQ=255)                                     cttcGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggc                                                                                                               >  6:104153‑M2/1‑109 (MQ=255)                                          ccATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATa                                                                                                          >  5:154985/1‑147 (MQ=255)                                                 tgcGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCAt                                                                                                 >  5:272728/1‑149 (MQ=255)                                                                gTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTcc                                                                                  >  7:109473/1‑149 (MQ=255)                                                                gTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTcc                                                                                  <  6:154985/149‑1 (MQ=255)                                                                   ggTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTccccc                                                                               >  8:300746/1‑149 (MQ=255)                                                                    gTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCt                                                                              <  1:271353/149‑1 (MQ=255)                                                                    gTCAGGTATCAATATTGATGTGGCCTGGGCCGGCCTATTCGCGGGTAACCCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGaac                                                                                        <  3:74111/139‑1 (MQ=255)                                                                        ggTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAAt                                                                          <  8:109473/149‑1 (MQ=255)                                                                        ggTATAATTATTGATGTCGCATCGGCCGGCTTATCCGCGCGAAACCCCGCCCCTACGCCCGG‑GCGCGCGCTTATCGTCGGCGGGGTTTTACCCGCTAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAAt                                                                          <  8:319544/149‑1 (MQ=255)                                                                                      tGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCGTATCGTAGGAGCGGGTTTACCCGCGAATAGGGCGGCACA‑GGCAATACAGACCCATCAGGCGCACAACTACCCCTGAATCCGCTCCAGCCGCt                                                            >  8:94622/1‑149 (MQ=37)                                                                                           ccTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACATGGCAATACAGAACCATCAGGCGAACAGCTCCCCCTGAATCCGCTCCAGCAGCTTCt                                                         <  1:103600/148‑1 (MQ=255)                                                                                                  cGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtag                                                                                                                                                 <  4:141420‑M2/53‑6 (MQ=255)                                                                                                  cGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtag                                                                                                                                                 >  3:141420‑M2/1‑48 (MQ=255)                                                                                                    gCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCCCA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGcc                                               >  6:119590/1‑148 (MQ=255)                                                                                                      cTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCt                                                         >  2:58866/1‑136 (MQ=255)                                                                                                      cTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCt                                                         <  1:58866/136‑1 (MQ=255)                                                                                                      cTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAg                                            >  3:19631/1‑149 (MQ=255)                                                                                                              gggTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctga                                                                                          >  6:337550‑M2/1‑36 (MQ=255)                                                                                                              gggTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctga                                                                                          <  5:337550‑M2/96‑61 (MQ=255)                                                                                                              gggTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCgctgct                                    >  6:377359/1‑149 (MQ=255)                                                                                                                     cccGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaac                                                       <  6:121669‑M2/124‑96 (MQ=255)                                                                                                                     cccGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaac                                                       >  5:121669‑M2/1‑29 (MQ=255)                                                                                                                     cccGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaa                                                        >  5:391186‑M2/1‑29 (MQ=255)                                                                                                                     cccGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaa                                                        <  6:391186‑M2/123‑95 (MQ=255)                                                                                                                     cccGCTACTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggc                               <  7:138592‑M2/148‑120 (MQ=255)                                                                                                                       cGCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaac                            <  8:143876‑M2/149‑123 (MQ=255)                                                                                                                       cGCTACTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAAt                           >  2:203878/1‑149 (MQ=255)                                                                                                                        gCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaac                            >  8:315030‑M2/1‑26 (MQ=255)                                                                                                                        gCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaac                            <  7:315030‑M2/148‑123 (MQ=255)                                                                                                                        gCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgcca                                                   <  1:303739‑M2/125‑100 (MQ=255)                                                                                                                        gCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgcca                                                   >  8:337284‑M2/1‑26 (MQ=255)                                                                                                                        gCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgcca                                                   <  7:337284‑M2/125‑100 (MQ=255)                                                                                                                        gCTCCTACGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgcca                                                   >  2:303739‑M2/1‑26 (MQ=255)                                                                                                                        gCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATc                          >  2:33375/1‑149 (MQ=255)                                                                                                                        gCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATc                          <  1:33375/149‑1 (MQ=255)                                                                                                                        gCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATc                          >  6:336039/1‑149 (MQ=255)                                                                                                                           ccTACGCACGG‑TATCTCGCTTATCGTACTACCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAg                       <  5:197136/149‑1 (MQ=255)                                                                                                                            cTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCTAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAgg                      <  7:300746/149‑1 (MQ=255)                                                                                                                            cTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGa                        <  5:377359/147‑1 (MQ=255)                                                                                                                              aCGCACGG‑GATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaacaccagcc                     >  7:143876‑M2/1‑20 (MQ=255)                                                                                                                                  aCGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTcag                 >  2:315230/1‑148 (MQ=255)                                                                                                                                    gg‑gATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTcagcag              >  2:104280/1‑149 (MQ=255)                                                                                                                                    gg‑gATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTcagcag              <  1:315230/149‑1 (MQ=255)                                                                                                                                          cgcgCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTc           >  4:154987/1‑147 (MQ=255)                                                                                                                                               ttATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTg    >  3:20690/1‑149 (MQ=255)                                                                                                                                                  tCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTc  <  1:203878/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGG‑GATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACA‑GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTC  >  NC_002947/5477003‑5477294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.