New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5845826 =72 (1.220)3 (0.050) 3/246 NT 4.2% coding (150/252 nt) yfhL 4Fe‑4S cluster‑containing protein
?NC_002947 5845861 = 67 (1.180)coding (185/252 nt) yfhL 4Fe‑4S cluster‑containing protein
Rejected: Frequency below/above cutoff threshold.

TGCGAACCCGAGTGCCCGAACGAGGCTATCTCCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCA  >  NC_002947/5845719‑5846009
                                                                                                                                               |                                                                                                                                                    
tGCGAACCCGAGTGCCCGAACGAGGCTATCTCCCAAAGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAgc                                                                                                                                                >  6:79322/1‑149 (MQ=255)
              cccGAACGAGGCTATCTCCCAAGGCGAAGAGATCTACGTGATCGGACACTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAAcc                                                                                                                                   >  1:263967/1‑149 (MQ=255)
                cGAACGAGGCTATCTCCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCgaa                                                                                                                                <  8:152753/149‑1 (MQ=255)
                 gAACGAGGCTATCTCCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCgaag                                                                                                                               <  2:263967/149‑1 (MQ=255)
                     gAGGCTATCTCCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCgaagaa                                                                                                                             >  7:220703/1‑147 (MQ=255)
                          tATCTCCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAgcgc                                                                                                                                              <  4:16945/125‑1 (MQ=255)
                          tATCTCCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAgcgc                                                                                                                                              >  3:16945/1‑125 (MQ=255)
                          tATCTCCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGa                                                                                                                      >  8:89273/1‑149 (MQ=255)
                           ggaagggcaatgatcagcccttgccagtgatccggcgatacttggccatcagctgttcttcggtttccggatgcgcttcatCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATg                                                                                                                                                    <  6:112490‑M1/38‑1 (MQ=255)
                           aTCTCCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATc                                                                                                                                           <  5:194323/127‑1 (MQ=255)
                           aTCTCCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATc                                                                                                                                           >  6:194323/1‑127 (MQ=255)
                           aTCTCCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGAt                                                                                                                     >  4:158800/1‑149 (MQ=255)
                              tcCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGc                                                                                                                  >  3:121739/1‑149 (MQ=255)
                                ccAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGcc                                                                                                                 >  6:210794/1‑148 (MQ=255)
                                ccAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGcc                                                                                                                 >  4:371665/1‑148 (MQ=255)
                                  caatgatcagcccttgccagtgatccggcgatacttggccatcagctgttcttcggtttccggatgcgcttcatCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGa                                                                                                                                                      <  1:277929‑M1/36‑1 (MQ=255)
                                  caatgatcagcccttgccagtgatccggcgatacttggccatcagctgttcttcggtttccggatgcgcttcatCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGa                                                                                                                                                      >  2:277929‑M1/75‑110 (MQ=255)
                                  aaGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAg                                                                                                              >  3:340397/1‑149 (MQ=255)
                                  aaGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAg                                                                                                              >  3:345930/1‑149 (MQ=255)
                                       gAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCg                                                                                                         >  3:285775/1‑149 (MQ=255)
                                             aTCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCt                                                                                                                        >  1:380371/1‑128 (MQ=255)
                                             aTCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCt                                                                                                                        <  2:380371/128‑1 (MQ=255)
                                             aTCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGAt                                                                                                   <  4:165001/149‑1 (MQ=255)
                                                tACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCAc                                                                                                >  6:66742/1‑149 (MQ=255)
                                                 aCGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACt                                                                                               >  8:337192/1‑149 (MQ=255)
                                                  cGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTg                                                                                              >  5:207049/1‑149 (MQ=255)
                                                   gTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTgg                                                                                             >  2:69497/1‑149 (MQ=255)
                                                       tCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAg                                                                                         <  3:158800/149‑1 (MQ=255)
                                                          gACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCTAGTATCGCCGGATCACTGGCAAggg                                                                                       <  2:294374/149‑1 (MQ=255)
                                                          gACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAggg                                                                                       <  5:210794/149‑1 (MQ=255)
                                                           aCCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGc                                                                                      <  4:121739/149‑1 (MQ=255)
                                                             ccTAACCTGCGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCt                                                                                     >  4:162646/1‑148 (MQ=255)
                                                               tAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGAt                                                                                  >  5:257351/1‑149 (MQ=255)
                                                                 aCCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCa                                                                                <  5:66742/149‑1 (MQ=255)
                                                                         aCCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGccc                                                                          >  7:270015/1‑147 (MQ=255)
                                                                         aCCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGccc                                                                          <  8:270015/147‑1 (MQ=255)
                                                                           ccAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTcc                                                                      <  6:207049/149‑1 (MQ=255)
                                                                           ccAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTcc                                                                      >  8:175598/1‑149 (MQ=255)
                                                                           ccAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTcc                                                                      >  2:167677/1‑149 (MQ=255)
                                                                                 cGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCa                                                                 <  7:337192/148‑1 (MQ=255)
                                                                                     ggCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTc                                                            >  3:17266/1‑149 (MQ=255)
                                                                                      gCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTc                                                            >  1:31383/1‑148 (MQ=255)
                                                                                        cATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCt                                                         >  3:354828/1‑149 (MQ=255)
                                                                                        cATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCt                                                         <  6:124827/149‑1 (MQ=255)
                                                                                          ttACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTgg                                                                                             <  3:99212/111‑1 (MQ=255)
                                                                                          ttACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTgg                                                                                             >  4:99212/1‑111 (MQ=255)
                                                                                          ttACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCtgt                                                       <  5:79322/149‑1 (MQ=255)
                                                                                             cGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGTGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTgag                                                    <  1:69497/149‑1 (MQ=255)
                                                                                             cGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTga                                                     <  4:17266/148‑1 (MQ=255)
                                                                                             cGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTga                                                     <  7:175598/148‑1 (MQ=255)
                                                                                                tGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGc                                                 <  8:220703/149‑1 (MQ=255)
                                                                                                   gCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGGGAGCagg                                              >  7:353148/1‑149 (MQ=255)
                                                                                                      gCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCAt                                           >  7:311461/1‑149 (MQ=255)
                                                                                                      gCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCAt                                           >  7:10304/1‑149 (MQ=255)
                                                                                                      gCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTACACGGTCCCTGTGAGAGCGGGCAt                                           >  6:269484/1‑149 (MQ=255)
                                                                                                         catccagcgggatgcagtcgaccgggcagacctgctggATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTcc                                                                      <  6:112490‑M2/81‑1 (MQ=255)
                                                                                                           tccagcgggatgcagtcgaccgggcagacctgctggATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTg                                                                             <  1:277929‑M2/74‑1 (MQ=255)
                                                                                                           tccagcgggatgcagtcgaccgggcagacctgctggATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTg                                                                             >  2:277929‑M2/37‑110 (MQ=255)
                                                                                                            CCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTg                                      <  3:14896‑M1/148‑1 (MQ=255)
                                                                                                             CAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCt                                    >  4:345930‑M1/1‑149 (MQ=255)
                                                                                                             CAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCt                                    >  4:340397‑M1/1‑149 (MQ=255)
                                                                                                             CAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCt                                    <  4:307830‑M1/149‑1 (MQ=255)
                                                                                                              AGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTc                                   >  2:31383‑M1/1‑149 (MQ=255)
                                                                                                              AGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTc                                   >  6:105608‑M1/1‑149 (MQ=255)
                                                                                                              AGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGCCTGATCATTGCCATTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCATGcta                                   <  7:252795‑M1/149‑2 (MQ=255)
                                                                                                               GCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTcc                                  <  8:264993‑M1/149‑1 (MQ=255)
                                                                                                               GCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTcc                                  >  4:14896‑M1/1‑149 (MQ=255)
                                                                                                                   gTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGGGAGCAGGCATGCCCGCTCTcaca                              <  7:32781/149‑1 (MQ=255)
                                                                                                                   gTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCcaca                              <  8:10304/149‑1 (MQ=255)
                                                                                                                   gTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCca                                >  8:281845/1‑147 (MQ=255)
                                                                                                                    tCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCTGAAAGCGATGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCTCGGTCCCTGTGGGAGCAGGCATGCCCGCTCTcaca                              <  8:353148/148‑1 (MQ=255)
                                                                                                                      tGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGtt                           >  3:324777/1‑149 (MQ=255)
                                                                                                                        cccGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGttt                          <  2:370630/148‑1 (MQ=255)
                                                                                                                        cccGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTa                         <  6:257351/149‑1 (MQ=255)
                                                                                                                         ccGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAg                        <  3:371665/149‑1 (MQ=255)
                                                                                                                           ggTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGt                      <  4:285775/149‑1 (MQ=255)
                                                                                                                             tCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGttt                    >  2:97186/1‑149 (MQ=255)
                                                                                                                                  tGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGGGAGCAGGCATGCCCGCTCTCACAgg                            <  6:107068/136‑2 (MQ=255)
                                                                                                                                  tGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGGGAGCAGGCATGCCCGCTCTCACAgg                            >  5:107068/1‑135 (MQ=255)
                                                                                                                                  tGCATCCCCATGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATCGCCAACTATCGCCGGATCACTGGCAAGGGCTGATCAATGCCCTTCCCTGCACCGTCCCTGTGAGAGCGGGCATGCCTTCTCCCACAGTTTAGGTTTCTCtt               >  6:366977/1‑149 (MQ=255)
                                                                                                                                    cATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTc              >  6:48318/1‑148 (MQ=255)
                                                                                                                                    cATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCa             <  7:281845/149‑1 (MQ=255)
                                                                                                                                     aTCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCaa            <  7:264993/149‑1 (MQ=255)
                                                                                                                                      tCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAAc           <  8:311461/149‑1 (MQ=255)
                                                                                                                                        ccGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACa          <  3:307830/148‑1 (MQ=255)
                                                                                                                                         cGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAgg        >  1:37739/1‑149 (MQ=255)
                                                                                                                                             ggATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCg    >  7:352386‑M2/3‑149 (MQ=255)
                                                                                                                                               aTGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCa  <  7:89273/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                    
TGCGAACCCGAGTGCCCGAACGAGGCTATCTCCCAAGGCGAAGAGATCTACGTGATCGACCCTAACCTGTGCACCCAGTGCGTAGGCCATTACGATGAGCCGCAGTGCCAGCAGGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCA  >  NC_002947/5845719‑5846009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.