New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5971206	52 (0.880)	4 (0.070)	4/242	NT	6.9%	coding (88/2124 nt)	PP_5236	hypothetical protein
	?	NC_002947	= 5971218	59 (1.060)					coding (76/2124 nt)	PP_5236	hypothetical protein

TTTCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCTATTGGATCCATTTTTGC  >  NC_002947/5971071‑5971365                                                                                                                                                     |                                                                                                                                                    tttCCTGGTCGAGCAGCATGTGCCCGGCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACc                                                                                                                                                    >  1:181677‑M2/1‑148 (MQ=255)  ttCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACc                                                                                                                                                    >  1:181681‑M2/1‑147 (MQ=255)   tCCTGGTCGAGCAGCATGTGCCCGTCAATGGC‑GCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACctg                                                                                                                                                  >  7:56899‑M2/1‑145 (MQ=255)     cTGGTCGAGCAGCATGTGCCAGTCAATGGGCGCCAGGTAGTCGGGTTACTCGGCGGGCGTGGCCTGACGCCACTGTGGCTCGAGCCTGTCGAAATAGCTGTTGAGTTGGTCGAATGCACTGGCCTGCACCTGTTCGCG‑CTTTACCTGgt                                                                                                                                                <  4:337270/149‑1 (MQ=255)      tGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACctggtg                                                                                                                                               <  4:213155‑M2/149‑7 (MQ=255)       ggTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACctggtgc                                                                                                                                              <  4:179716‑M2/149‑8 (MQ=255)       ggTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACctggtgc                                                                                                                                              <  8:236572‑M2/149‑8 (MQ=255)        gTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACctggtgc                                                                                                                                              >  2:190049‑M2/1‑141 (MQ=255)        gTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACctggtg                                                                                                                                               >  3:114842‑M2/1‑141 (MQ=255)        gTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGgtgcg                                                                                                                                             >  5:61171/1‑149 (MQ=255)        gTCGAGCAGCATGTGCACGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGgtgcg                                                                                                                                             >  2:6522/1‑149 (MQ=255)         tCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACctg                                                                                                                                                  >  1:334161‑M2/1‑140 (MQ=255)         tCGAGCAGCATGTGCCCGTCAATGGCCCCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACctg                                                                                                                                                  <  2:334161‑M2/143‑4 (MQ=255)           gAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGgtgcgtgc                                                                                                                                          >  2:62340/1‑149 (MQ=255)              cagcaTGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCggg                                                                                                                                       >  6:57632/1‑149 (MQ=255)               agcaTGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGc                                                                                                                                      <  2:252259/149‑1 (MQ=255)                  aTGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAg                                                                                                                                   <  3:243922/149‑1 (MQ=255)                   tgtgCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGc                                                                                                                                  <  7:173553/149‑1 (MQ=255)                       cccGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGttt                                                                                                                              <  3:361821/149‑1 (MQ=255)                       cccGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGttt                                                                                                                              <  7:346634/149‑1 (MQ=255)                        ccGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTg                                                                                                                             <  7:236572/149‑1 (MQ=255)                         cGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCgg                                                                                                                                        <  1:365263/137‑1 (MQ=255)                         cGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCgg                                                                                                                                        >  2:365263/1‑137 (MQ=255)                         cGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGc                                                                                                                            <  6:61171/149‑1 (MQ=255)                              aTGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCCCTGAGCCTCGAGCCTGACGAAAACGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACg                                                                                                                         >  5:274261/1‑147 (MQ=255)                                 gccgccAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCGCCATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAg                                                                                                                      <  1:62340/148‑1 (MQ=255)                                   cgccAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCaa                                                                                                                   >  5:46006/1‑148 (MQ=255)                                    gccAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCTCGCGTTTGCACAGAGCAATa                                                                                                                 >  6:265385/1‑149 (MQ=255)                                    gccAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATa                                                                                                                 >  1:48322/1‑149 (MQ=255)                                     ccAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATAc                                                                                                                <  1:204708/149‑1 (MQ=255)                                        ggTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGAGGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTc                                                                                                             <  5:57632/149‑1 (MQ=255)                                        ggTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTc                                                                                                             <  1:6522/149‑1 (MQ=255)                                                  gAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCAttt                                                                                                   <  3:103406/149‑1 (MQ=255)                                                      tCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGa                                                                                                 >  2:259258/1‑147 (MQ=255)                                                        gCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGgtgcgt                                                                                                                                            >  1:210900/1‑102 (MQ=255)                                                        gCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGgtgcgt                                                                                                                                            <  2:210900/102‑1 (MQ=255)                                                                 ggCCTGACGCCACTGAGCCTCGAGCCTGTCGAAATAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACAAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGt                                                                                    <  6:352223/149‑1 (MQ=255)                                                                 cgCCTGACGCCACTCAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCCTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGt                                                                                    >  6:123581/2‑149 (MQ=255)                                                                       aCGCCTCTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTTCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGTGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATc                                                                              <  6:274261/149‑1 (MQ=255)                                                                       aCGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCAGTTGAAACAAGACGCCGTGCCaac                                                                              >  6:267297/1‑147 (MQ=255)                                                                              tGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATACACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATgg                                                                        >  1:72228/1‑148 (MQ=255)                                                                                 gCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGAG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAAc                                                                    <  3:213155/149‑1 (MQ=255)                                                                                   cTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAaag                                                                                              >  8:219208/1‑121 (MQ=255)                                                                                   cTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAaag                                                                                              <  7:219208/121‑1 (MQ=255)                                                                                            gTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGa                                                                                                 <  6:104699/109‑1 (MQ=255)                                                                                               gAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCcaa                                                       <  3:179716/148‑1 (MQ=255)                                                                                                aaaaaGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCcaaca                                                     <  2:48322/149‑1 (MQ=255)                                                                                                  aaaGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCcaacaa                                                    >  5:298602/1‑148 (MQ=255)                                                                                                       ggTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGaa                                                                                                <  4:370772/99‑1 (MQ=255)                                                                                                       ggTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGaa                                                                                                >  3:370772/1‑99 (MQ=255)                                                                                                         ttGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGt                                            >  4:338273/1‑149 (MQ=255)                                                                                                               tCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCaacaac                                                   <  8:62539/136‑1 (MQ=255)                                                                                                               tCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCaacaac                                                   >  7:62539/1‑136 (MQ=255)                                                                                                                 gacgaATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCAt                                                                          >  7:261530/1‑111 (MQ=255)                                                                                                                 gacgaATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCAt                                                                          <  8:261530/111‑1 (MQ=255)                                                                                                                            tGGCCTGCACCAGTTCGCG‑CATTACctggtgcaggccagtgcattcgtctaactcaaccgctttttcgacaggctcgaggctcagtggcgtcaggccccgcccgg                                                                     >  8:254129‑M2/1‑25 (MQ=255)                                                                                                                            tGGCCTGCACCAGTTCGCG‑CATTACctggtgcaggccagtgcattcgtcgaactcaaccgctttttcgacaggctcgaggctcagtggcgtcaggccccgcccgg                                                                     <  7:254129‑M2/105‑81 (MQ=255)                                                                                                                                cTGCACCAGTTCGCG‑CATTACctggtgcaggccagtgcattcgtcgaactcaaccgctttttcgacaggctcgaggctcagtggcgtcaggccccgcccggcga                                                                  >  1:115067‑M2/1‑21 (MQ=255)                                                                                                                                cTGCACCAGTTCGCG‑CATTACctggtgcaggccagtgcattcgtcgaactcaaccgctttttcgacaggctcgaggctcagtggcgtcaggccccgcccggcga                                                                  <  2:115067‑M2/104‑84 (MQ=255)                                                                                                                                cTGCACCAGTTCGCG‑CATTACCTGGTGCCTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGc                     >  1:216529/1‑149 (MQ=255)                                                                                                                                 tGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGcc                    >  2:172395/1‑149 (MQ=255)                                                                                                                                   cACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCt                   <  1:259258/148‑1 (MQ=255)                                                                                                                                   cACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCTa                  >  4:179328/1‑149 (MQ=255)                                                                                                                                    aCCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCcaacaa                                                    <  1:240419/114‑1 (MQ=255)                                                                                                                                    aCCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCcaacaa                                                    >  2:240419/1‑114 (MQ=255)                                                                                                                                     ccAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTgc                            <  5:53207/137‑1 (MQ=255)                                                                                                                                     ccAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTgc                            >  6:53207/1‑137 (MQ=255)                                                                                                                                     ccAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCTAtt                <  6:46006/149‑1 (MQ=255)                                                                                                                                      cAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAAGAACACt                                                <  5:371002/116‑1 (MQ=255)                                                                                                                                      cAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACt                                                >  6:371002/1‑116 (MQ=255)                                                                                                                                      cAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCTATTg               >  5:217005/1‑149 (MQ=255)                                                                                                                                      cAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCTATTg               <  5:123581/149‑1 (MQ=255)                                                                                                                                       aGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACTGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCTATTgg              <  5:265385/149‑1 (MQ=255)                                                                                                                                          tCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTaa                                              >  3:113686/1‑114 (MQ=255)                                                                                                                                          tCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTaa                                              <  4:113686/114‑1 (MQ=255)                                                                                                                                            gcg‑cATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCaa                        >  2:70039/1‑134 (MQ=255)                                                                                                                                            gcg‑cATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCaa                        <  1:70039/134‑1 (MQ=255)                                                                                                                                              g‑cATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCTATTGGATCCAtt       >  5:246543/1‑149 (MQ=255)                                                                                                                                              g‑cATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCTATTGGATCCAtt       >  7:197373/1‑149 (MQ=255)                                                                                                                                                     ccTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCTATTGGATCCATTTTTGc  <  3:179328/148‑1 (MQ=255)                                                                                                                                                     ccTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCTATTGGATCCATTTTTGc  <  3:338273/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    TTTCCTGGTCGAGCAGCATGTGCCCGTCAATGGCCGCCAGGTAGGCCGGGAACTCGCCGGGCGGGGCCTGACGCCACTGAGCCTCGAGCCTGTCGAAAAAGCGGTTGAGTTCGACGAATGCACTGGCCTGCACCAGTTCGCG‑CATTACCTGGTGCGTGCGGGCGAGCGTTTGCACGGAGCAATACCTCAAGTCCATTTGAAAGAAGACGCAGTGCCATCCCATGGCAACTGCGGTTACCCAACAACACTAAGTCATACCTGACGCCTGCGCAAAGCCTATTGGATCCATTTTTGC  >  NC_002947/5971071‑5971365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.