| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,288,074 | G→C | 9.1% | A13A (GCC→GCG) | xthA ← | exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,288,074 | 0 | G | C | 9.1% | 229.3 / 12.2 | 77 | A13A (GCC→GCG) | xthA | exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI |
| Reads supporting (aligned to +/- strand): ref base G (36/33); new base C (3/4); total (39/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.76e-01 | |||||||||||
GGCCTTTCTGGCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTGGGGGTGAACGAA > NC_002947/3287929‑3288219 | ggCCTTTCTGGCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATgcgggcgg < 8:200737/146‑1 (MQ=255)ggCCTTTCTGGCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATgcgggcgg > 7:200737/1‑146 (MQ=255)ggCCTTTCTGGCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGcc > 3:200852/1‑149 (MQ=255) gCCTTTCTGGCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGccc > 2:98947/1‑149 (MQ=255) cTTTCTGGCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCg > 5:265686/1‑148 (MQ=255) tCTGGCCATGGTAGTGCACGTGGTAACGCTTTGCCTGCACGTCGGCCATC‑GGGTACTGATCGTCGGTGACCTTGGTTTCCTGCAGGGCGTTCACGTGCGGCTGGTTCTTTTCGATCAGCGCCGCCATCTGATGCGGGCGGGCCCGCAg < 8:181536/148‑1 (MQ=255) tCTGGCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAgg > 3:157965/1‑149 (MQ=255) tCTGGCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAgg > 3:152397/1‑149 (MQ=255) cTGGCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAgg < 6:128247/148‑1 (MQ=255) gCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTTGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGt < 8:149345/149‑1 (MQ=255) gCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCCCGCCCGCatca < 3:178958/146‑4 (MQ=255) ccATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGGGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGtt < 5:110400/149‑1 (MQ=255) cATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTg < 3:105379/149‑1 (MQ=255) gTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGt < 2:235539/149‑1 (MQ=255) cACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGaaa > 7:96687/1‑148 (MQ=255) cACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAAc < 4:200852/149‑1 (MQ=255) aCGTGGTAACCCAGTGCCTGCACGTCGGCCAGCGGGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGaaa > 1:45651/1‑148 (MQ=255) gTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGa > 5:191394/1‑149 (MQ=255) ccAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGa > 6:265673/1‑141 (MQ=255) ccAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGa < 5:265673/141‑1 (MQ=255) ccAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCtt < 2:28065/148‑1 (MQ=255) ccAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCtt > 1:28065/1‑148 (MQ=255) tGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATg > 7:123670/1‑148 (MQ=255) ccTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGa > 5:263372/1‑148 (MQ=255) gCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGa > 3:32984/1‑149 (MQ=255) gTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAAt < 4:216429/149‑1 (MQ=255) gTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAAt < 4:157965/149‑1 (MQ=255) gTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAAt < 4:152397/149‑1 (MQ=255) ccAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCgg < 5:289556/149‑1 (MQ=255) ccAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCCCGCCCGCatca < 4:154582/105‑4 (MQ=255) ccAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCCCGCCCGCatca < 4:149014/105‑4 (MQ=255) ccAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCCCGCCCGCatca > 3:154582/1‑102 (MQ=255) ccAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCCCGCCCGCatca > 3:149014/1‑102 (MQ=255) cAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCgg > 3:218175/1‑148 (MQ=255) cAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGt < 8:123670/149‑1 (MQ=255) c‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTaa > 5:159608/1‑148 (MQ=255) tGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGgcgc > 6:110199/1‑148 (MQ=255) aTCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGAt < 6:191394/149‑1 (MQ=255) aTCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCATTTCGATCAGCGACGCCAGCTGATGAGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCCCTAAAAGGCGCGAt > 5:94050/1‑149 (MQ=255) tcgtcgCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATg > 7:98473/1‑149 (MQ=255) gtcgCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGCTGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGc < 1:98947/148‑1 (MQ=255) ccTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCTAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACa > 1:229983/1‑149 (MQ=255) ccTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACa < 8:96687/149‑1 (MQ=255) cTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTAGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGCCAt > 5:102750/1‑149 (MQ=255) tttCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACATACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGAc < 2:313614/148‑1 (MQ=255) tttCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGAc > 1:313614/1‑148 (MQ=255) tCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCt < 2:45651/148‑1 (MQ=255) cTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCa > 3:271044/1‑149 (MQ=255) tGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCa > 4:55092/1‑148 (MQ=255) tGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCAt > 2:329206/1‑149 (MQ=255) gaaGGACGATCACGTCCGCCTTGAGATTATCGATCAGCGCCGCCACCTCATCCGCCCCGGCCCGCAGGCCGTTGATGATTAAAAAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGCCGCGATCCTAGACGACATCGACCTTCAt > 2:288387/3‑148 (MQ=255) aGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCAc > 3:275394/1‑149 (MQ=255) cGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGa < 2:30470/84‑1 (MQ=255) cGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCAGCAGGCCGTTGATGTTGAAACAGACGa > 1:30470/1‑84 (MQ=255) gATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCa > 6:262021/1‑149 (MQ=255) gATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAAGCCCGGTAAACGGCGCGATGCTAGCCGACAGCGACGTGCATCCCCAGCa > 8:158195/1‑149 (MQ=255) tCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATg < 6:265686/149‑1 (MQ=255) cGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATggcg > 3:287877/1‑149 (MQ=255) cGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATggcg < 4:271044/149‑1 (MQ=255) tGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGc > 5:24085/1‑149 (MQ=255) ttttCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATgg > 4:200295/1‑133 (MQ=255) ttttCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATgg < 3:200295/133‑1 (MQ=255) gATCATCGCCGCCTGGTGATGCGGGCGGGCCCGCAGGCGGTTGATGTTGAATCAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTgctgct < 6:94050/149‑1 (MQ=255) gccgccAGCTGATGCGGTCGTGCCCGCAGGCCGTTGATGTTGAAACAGACTATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGc < 1:288387/149‑1 (MQ=255) gCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTggg < 3:55092/149‑1 (MQ=255) cTGATGCGGGCGGGGCCGCTGGCCGTAGATGTTTAACCAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTgggg < 6:102750/149‑1 (MQ=255) cTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGcgcg > 1:282887/1‑78 (MQ=255) cTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGcgcg < 2:282887/78‑1 (MQ=255) cTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTgggg < 8:98473/149‑1 (MQ=255) cTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTgggg < 2:229983/149‑1 (MQ=255) cTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTgggg > 6:191196/1‑149 (MQ=255) tGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAg < 3:257580/119‑1 (MQ=255) tGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAg > 4:257580/1‑119 (MQ=255) gATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGt < 6:55760/137‑1 (MQ=255) gATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGt > 5:55760/1‑137 (MQ=255) cctGCGGGCCCGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTggggg > 2:176388/3‑148 (MQ=255) cctGCGGGCCCGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTggggg < 1:176388/146‑1 (MQ=255) aTGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTggggg < 1:329206/147‑1 (MQ=255) aTGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTggggg < 4:32984/147‑1 (MQ=255) gcgggcCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTGGGGGTGAACGaa < 5:110199/149‑1 (MQ=255) gggcCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATcc > 6:370038/1‑53 (MQ=255) gggcCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATcc < 5:370038/53‑1 (MQ=255) | GGCCTTTCTGGCCATGGTAGTGCACGTGGTAACCCAGTGCCTGCACGTCGGCCAGC‑GGGAACTGATCGTCGCTGACCTTGGTTTCCTGCAGGCCGATCACGTCCGGCTGGTGCTTTTCGATCAGCGCCGCCAGCTGATGCGGGCGGGCCCGCAGGCCGTTGATGTTGAAACAGACGATCTTCATGGAAAGACAATCCCGGTAAAAGGCGCGATGCTAGCCGACATCGACCTGCATCACCAGCATGGCGGCCAGGCGAGCCTGCTGCTAACGTGCTGTTGGGGGTGAACGAA > NC_002947/3287929‑3288219 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |