Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,300,859 | A→T | 7.9% | D16E (GAT→GAA) ‡ | lpxH ← | UDP‑2,3‑diacylglucosamine hydrolase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,300,859 | 0 | A | T | 7.9% | 236.6 / 5.1 | 81 | D16E (GAT→GAA) ‡ | lpxH | UDP‑2,3‑diacylglucosamine hydrolase |
Reads supporting (aligned to +/- strand): ref base A (35/39); new base T (3/4); total (38/43) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GCCGGCGCATGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCGATGGCGTCGAC > NC_002947/3300714‑3301001 | gCCGGCGCATGGCCCGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATcc < 8:169264/149‑1 (MQ=255) cGGCGCATGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCgg < 5:41428/149‑1 (MQ=255) cGGCGCATGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCgg < 2:63043/149‑1 (MQ=255) gcgcATGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGc < 3:354629/149‑1 (MQ=255) aTGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGttc > 3:288573/1‑149 (MQ=255) tGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGATATTTCCCGGGCGtttc < 4:376775/149‑3 (MQ=255) tGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGATATTTCCCGGGCGtttc < 4:253437/149‑3 (MQ=255) gCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGttct‑tc < 7:44145/149‑1 (MQ=255) tGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTAGAAGAAGTCCCCAAGGATGTACAGGGCCATGGCATGGCGGGCGCGTCAATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTg > 7:284966/1‑149 (MQ=255) gCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCa < 5:153350/149‑1 (MQ=255) gCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCa < 2:259882/149‑1 (MQ=255) gCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCa < 2:146991/149‑1 (MQ=255) tgctgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCagat > 7:244409/1‑148 (MQ=255) ctgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCagatcag < 6:294034/149‑1 (MQ=255) ctgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCagatca < 8:244409/148‑1 (MQ=255) ctgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCagat > 6:381220/1‑146 (MQ=255) tgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCGCCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCa > 8:186636/1‑142 (MQ=255) tgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCGCCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCa < 7:186636/142‑1 (MQ=255) tgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCagatca > 8:45619/1‑147 (MQ=255) tgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCagatca > 5:296682/1‑147 (MQ=255) tggCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCagatcagagatca < 5:53038/148‑1 (MQ=255) gggCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACATGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCagatcagagatca < 5:381220/149‑1 (MQ=255) gggCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCagatcagagatca < 1:332221/149‑1 (MQ=255) tcgtcgCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGCGCCTTGGCATGGCGGGCGCGTCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCa < 8:284966/149‑1 (MQ=255) tcgtcgCCAATCCACCCTTCGAAGAAGTCACCAAGGAAGTAAAGCGCCTTGGCATGGCGGGCGCGGCCAACGAGAAGATCAAGAAACTCCCGGGAAATATCAGGGCGTTCT‑TCTTGAAGGTGCAGATCAGAGATCAGCAGAATCACTc > 2:296882/1‑148 (MQ=255) gCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATc < 6:278077/96‑1 (MQ=255) gCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATc > 5:278077/1‑96 (MQ=255) tCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCgg < 4:288573/149‑1 (MQ=255) tCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCgg < 2:272769/149‑1 (MQ=255) cTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTtct < 7:45619/149‑1 (MQ=255) ttCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCTTGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTtctc > 2:84671/1‑149 (MQ=255) ttCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTtctc > 5:334732/1‑149 (MQ=255) agaagTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCgatga > 6:26265/1‑149 (MQ=255) gaagTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGttct‑tc < 4:33803/90‑1 (MQ=255) gaagTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGttct‑tc > 3:33803/1‑90 (MQ=255) aagTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCgatgat > 2:279131/1‑148 (MQ=255) actaaGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATTTCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCgatg < 6:23391/138‑1 (MQ=255) actaaGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATTTCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCgatg > 5:23391/4‑141 (MQ=255) aCCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCAcgtc > 6:328516/1‑149 (MQ=255) ccAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCAcgtcg > 5:141043/1‑149 (MQ=255) ccAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCAcgtcg > 5:48614/1‑149 (MQ=255) cAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCAcgtcgt > 1:161002/1‑149 (MQ=255) aaGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACgtcgtc < 6:296682/149‑1 (MQ=255) gATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATATCGGCTTTCTGGATGATCACGTCGTCAtt > 7:163917/1‑149 (MQ=255) aCAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTtct‑tct < 5:372101/74‑1 (MQ=255) aCAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTtct‑tct > 6:372101/1‑74 (MQ=255) aCAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTa > 8:220042/1‑149 (MQ=255) cAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTAc > 6:275528/1‑149 (MQ=255) cTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCtg > 8:344806/1‑149 (MQ=255) ggCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATACGGGAGTTCT‑TATTGCAGGTGCAGATCAGATATCAGCAGAATCAATCAATTATCTCGGCTTTCTCGATGATCCCGTCGACCTTCGGTACGAACtggtg > 4:328986/1‑149 (MQ=255) gCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATcagca < 1:235037/88‑1 (MQ=255) gCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATcagca > 2:235037/1‑88 (MQ=255) aTGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAAt > 3:367197/1‑98 (MQ=255) aTGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAAt < 4:367197/98‑1 (MQ=255) aTGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGc > 2:179855/1‑148 (MQ=255) aTGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGc > 5:386979/1‑148 (MQ=255) tGGCGGGCGCGGCCATCTAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGc > 1:112203/1‑147 (MQ=255) gcgggcgCGTCCATCTATCATATCAATAAACGCGCGTGAAATATCCGGGCGTTCTCTCTTCCTTGTCCACNTCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCa < 1:122755/148‑1 (MQ=255) ggcgCGGCCATCTAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCttt < 2:112203/149‑1 (MQ=255) ggcgCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCttt < 7:344806/149‑1 (MQ=255) ccATCGAGAAGATCAAGAAACGACCGGGAAATATCCGGGCGTTAT‑TCTTGCAGGTGCAGATCTGTGATCAGCAGAATCACTCAATGATCTCTGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAAc < 3:328986/147‑1 (MQ=255) aTCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGt < 1:341093/149‑1 (MQ=255) tCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTg < 8:281672/149‑1 (MQ=255) tCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTg < 1:279131/149‑1 (MQ=255) tCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTg < 6:141043/149‑1 (MQ=255) tCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCA‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTg < 5:328516/149‑1 (MQ=255) gAGCAGATCAAGAAACGCCCGGGAAATATCGGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGc > 1:31064/1‑149 (MQ=255) cAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCAcg < 1:197511/102‑1 (MQ=255) cAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCAcg > 2:197511/1‑102 (MQ=255) gATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACtt < 6:48614/149‑1 (MQ=255) cAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACttttt > 1:199335/1‑149 (MQ=255) cAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACttttt > 3:85207/1‑149 (MQ=255) gaagaaCGCCCGGATATTTCCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTc < 2:291489/145‑1 (MQ=255) gaagaaCGCCCGGATATTTCCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTc > 1:291489/5‑149 (MQ=255) gAAACGCCCGGTAAATATCCGGTCGTTCT‑TCTTTCAGGTTCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCGa < 8:163917/149‑1 (MQ=255) gAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCAcgtc > 2:202253/1‑96 (MQ=255) agaaCGCCCGGATATTTCCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCg > 8:73815/3‑148 (MQ=255) aaCGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCGAt < 2:161002/148‑1 (MQ=255) gCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCGATGGCg < 7:220042/149‑1 (MQ=255) cGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTAGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCGATGGCGTc > 5:53577/1‑148 (MQ=255) ggAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCGATGGCGTCGAc < 1:179855/149‑1 (MQ=255) | GCCGGCGCATGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCT‑TCTTGCAGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCGATGGCGTCGAC > NC_002947/3300714‑3301001 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |