| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,313,828 | T→G | 9.1% | intergenic (+33/‑126) | hemB → / → proP | 5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,313,828 | 0 | T | G | 9.1% | 225.0 / 12.3 | 78 | intergenic (+33/‑126) | hemB/proP | 5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease |
| Reads supporting (aligned to +/- strand): ref base T (36/34); new base G (4/3); total (40/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.88e-01 | |||||||||||
CCGGTGCCATCGACGAAGGCCGGGTGGTGCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAACCTCGCAAGAAAAG > NC_002947/3313680‑3313973 | ccGGTGCCATCGACGAAGGCCGGGTGGTGCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCAtt < 2:102412/149‑1 (MQ=255) cATCGACGAAGGCCGGGTGGTGCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCAATGGCAGCgg < 3:79635/149‑1 (MQ=255) aTCGACGAAGGCCGGGTGGTGCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGc > 6:352107/1‑149 (MQ=255) aTCGACGAAGGCCGGGTGGTGCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGc > 1:351096/1‑149 (MQ=255) acgaAGGCCGGGTGGTGCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCtttt < 1:176726/149‑1 (MQ=255) acgaAGGCCGGGTGGTGCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCttt > 3:313744/1‑148 (MQ=255) acgaAGGCCGGGTGGTGCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCAGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCttt > 8:353625/1‑148 (MQ=255) cgaAGGCCGGGTGGTGCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTc < 6:79093/149‑1 (MQ=255) aGGCCGGGTGGTGCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGTCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCttt < 8:35213/149‑1 (MQ=255) gtgCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGtt > 6:328933/1‑149 (MQ=255) cgcgAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTggg < 2:351096/149‑1 (MQ=255) gcgAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGggt < 7:268278/149‑1 (MQ=255) gcgAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGggt > 3:189477/1‑149 (MQ=255) aTTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTgcgc < 4:64935/133‑1 (MQ=255) aTTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTgcgc > 3:64935/1‑133 (MQ=255) aTTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCg > 8:348203/1‑148 (MQ=255) ttGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCt > 4:188586/1‑124 (MQ=255) ttGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCt < 3:188586/124‑1 (MQ=255) gcgcAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCaaa < 7:348203/148‑1 (MQ=255) aaTCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCAATGGCAg < 2:202283/107‑1 (MQ=255) aaTCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCAATGGCAg > 1:202283/1‑107 (MQ=255) aTCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGcac > 8:282846/1‑148 (MQ=255) aGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGca > 2:269458/1‑143 (MQ=255) aGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATCGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGca < 1:269458/143‑1 (MQ=255) tGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACa < 4:189477/149‑1 (MQ=255) tGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGt > 2:94913/1‑148 (MQ=255) gTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAg > 6:77188/1‑149 (MQ=255) tGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAgc < 7:353625/149‑1 (MQ=255) cAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAgcgc < 5:345154/149‑1 (MQ=255) cAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAgcgc > 2:355119/1‑149 (MQ=255) cAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAgcgc > 1:40033/1‑149 (MQ=255) ccTGAACCTGACCTACTTCTCCATGTACCTGGCTCGCGAATTTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCTCTTACATTGCAGAGGATTTTCTTTTTGCTCCGTTGGGTGGTTCCGCAAAAGCACAAAAAAACAGTAAgatcttaa < 7:307728/149‑8 (MQ=255) cTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCt > 4:365321/1‑95 (MQ=255) cTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCt < 3:365321/95‑1 (MQ=255) cTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAgc < 1:184961/142‑1 (MQ=255) cTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAgc > 2:184961/1‑142 (MQ=255) cTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAat < 2:40033/149‑1 (MQ=255) cTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAat > 8:103684/1‑149 (MQ=255) aTCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAattat > 3:291232/1‑149 (MQ=255) ccTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGCGCAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAattatt > 1:84047/1‑149 (MQ=255) cTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTAttt < 1:355119/148‑1 (MQ=255) aCCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAgt < 5:352107/148‑1 (MQ=255) aCCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAg < 3:352682/147‑1 (MQ=255) cTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTc < 7:282846/149‑1 (MQ=255) tACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTcc > 8:154873/1‑149 (MQ=255) cGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCtgtt < 7:154873/148‑1 (MQ=255) ccATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTTGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAgt > 8:349278/1‑138 (MQ=255) ccATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAgt < 7:349278/138‑1 (MQ=255) ccATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTa > 5:199287/1‑149 (MQ=255) aTGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATc < 7:103684/149‑1 (MQ=255) aCCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGAt > 3:70244/1‑149 (MQ=255) aCCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGCGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTCAt > 7:151856/1‑149 (MQ=255) ccTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATc < 4:291232/149‑1 (MQ=255) ccTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATc > 2:349154/1‑149 (MQ=255) gcgcgcGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCt > 1:25363/1‑148 (MQ=255) cgcgAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTaga < 6:199287/149‑1 (MQ=255) aTCTGAAGC‑CAGGCCTTTGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCAt < 4:313744/148‑1 (MQ=255) tCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATc < 7:126041/148‑1 (MQ=255) gAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGa > 5:64762/1‑147 (MQ=255) gAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGa > 7:17799/1‑147 (MQ=255) aaGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAg < 1:349154/149‑1 (MQ=255) cgatctggCCTTGGTCATGAAAGCCGCTGCTATTGCATCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAATGCACAAAAAAACAGTAAGCGATGTATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAg < 3:111834/143‑1 (MQ=255) cAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGa > 6:144713/1‑148 (MQ=255) gCCTTGGTCATGAAAGCCTCTGCTATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATATGATCACTTAGAGCATTCATCGACAg > 4:111834/1‑142 (MQ=255) gTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGAt > 7:307744/1‑114 (MQ=255) gTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGAt < 8:307744/114‑1 (MQ=255) aTGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGaaa < 5:144713/149‑1 (MQ=255) aTGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGaaa < 4:70244/149‑1 (MQ=255) tGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAAc > 7:212679/1‑149 (MQ=255) gAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAAcc > 7:16656/1‑149 (MQ=255) aaaGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAACCt > 4:280300/1‑149 (MQ=255) gCCGCTGCAATGGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAACCTCg > 3:341598/1‑148 (MQ=255) ccGCTGCAATGGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAACCTCGc > 3:360029/1‑148 (MQ=255) cGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAACCTCGc > 6:372051/1‑147 (MQ=255) cGCTGCAATGGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAACCTCGCaa < 4:341598/149‑1 (MQ=255) gCTGCAATGGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAACCTCGc > 1:167760/1‑146 (MQ=255) ccATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAACCTCGCAAGaaa < 5:77188/148‑1 (MQ=255) ccATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAACCTCGCAAGaa < 5:328933/147‑1 (MQ=255) cATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAACCTCGCAAGAAAAg < 2:25363/149‑1 (MQ=255) | CCGGTGCCATCGACGAAGGCCGGGTGGTGCGCGAAAGCATTGGCGCAATCAAGCGTGCTGGTGCAGACCTGATCCTGACCTACTTCGCCATGGACCTGGCGCGCGAAGGTATCTGAAGC‑CAGGCCTTGGTCATGAAAGCCGCTGCCATTGCAGCGGCTTTTCTTTGTGCGCCGTTGGGTGGTGCCGCAAACGCACAAAAAAACAGTAAGCGCTGAATTATTTAGTGTCCTGTTGTATCTGATCCCTTAGAGCATTCATCGACAGGGATACGGGTATGAAACCTCGCAAGAAAAG > NC_002947/3313680‑3313973 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |