Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,420,239 T→C 5.9% intergenic (‑55/‑24) PP_3033 ← / → PP_3034 CI/C2 family transcriptional regulator/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,420,2390TC 5.9% 205.6 / 2.1 68intergenic (‑55/‑24)PP_3033/PP_3034CI/C2 family transcriptional regulator/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (34/30);  new base C (2/2);  total (36/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CACGCCTCTGCCTCGGCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCCTGGCT  >  NC_002947/3420092‑3420385
                                                                                                                                                   |                                                                                                                                                  
cACGCCTCTGCCTCGGCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGAACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTc                                                                                                                                                   >  6:135734/1‑149 (MQ=255)
 aCGCCTCTGCCTCGGCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTACACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTcc                                                                                                                                                  <  4:128462/149‑1 (MQ=255)
     ctctGCCTCGGCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGt                                                                                                                                              <  7:267653/149‑1 (MQ=255)
          gcTCGGCTTCTAACACCGGCATCGGCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGAt                                                                                                                                          <  6:378917/147‑1 (MQ=255)
            tCGGCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATa                                                                                                                                         >  3:334362/1‑147 (MQ=255)
              ggCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAg                                                                                                                                      <  8:257606/148‑1 (MQ=255)
               gCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAg                                                                                                                                      >  5:367403/1‑147 (MQ=255)
                        acCGGCATCGTCGAGGGCCTCAAGTAGTCGTGCGCTGAAGGCTGCGCGTAGATCATTTTTATCAAACATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAAATCCGGCTTGATAAAGGTGATTGAAAt                                                                                                                           >  8:188167/1‑149 (MQ=255)
                                   cgAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCg                                                                                                                <  6:134910/149‑1 (MQ=255)
                                            cATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGc                                                                                                                   <  4:38202/137‑1 (MQ=255)
                                            cATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGc                                                                                                                   >  3:38202/1‑137 (MQ=255)
                                                tAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGaa                                                                                                   >  5:58701/1‑149 (MQ=255)
                                                        cgcTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATTGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATa                                                                                            <  5:135734/148‑1 (MQ=255)
                                                        cgcTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTcc                                                                                                      <  2:250030/138‑1 (MQ=255)
                                                        cgcTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTcc                                                                                                      >  1:250030/1‑138 (MQ=255)
                                                                    cgcgTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCtttt                                                                                <  4:334362/148‑1 (MQ=255)
                                                                     gcgTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATa                                                                                            >  7:337502/1‑135 (MQ=255)
                                                                     gcgTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATa                                                                                            <  8:337502/135‑1 (MQ=255)
                                                                            tCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGtt                                                                       >  4:69209/1‑149 (MQ=255)
                                                                              aTTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTg                                                                      <  8:235307/148‑1 (MQ=255)
                                                                                ttttATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAg                                                                   >  7:308388/1‑149 (MQ=255)
                                                                                aaccaTCAACCCATGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAg                                                                   >  3:27586/5‑149 (MQ=255)
                                                                                 tttATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAg                                                                   <  6:367403/148‑1 (MQ=255)
                                                                                 tttATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAg                                                                   <  6:58701/148‑1 (MQ=255)
                                                                                 accaTCAACCCATGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGaa                                                                             >  2:116209/4‑138 (MQ=255)
                                                                                 accaTCAACCCATGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGaa                                                                             <  1:116209/135‑1 (MQ=255)
                                                                                  ccaTCAACCCATGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGa                                                                    >  1:87972/3‑146 (MQ=255)
                                                                                  ccaTCAACCCATGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGa                                                                    <  2:87972/144‑1 (MQ=255)
                                                                                    aTCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTAt                                                               >  6:42094/1‑149 (MQ=255)
                                                                                       aaCCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCgg                                                            >  7:166403/1‑149 (MQ=255)
                                                                                           aTGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGtgct                                                        >  3:101954/1‑149 (MQ=255)
                                                                                              ggTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGtgctgct                                                     <  8:166403/149‑1 (MQ=255)
                                                                                                   aTGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCaa                                                <  5:238006/149‑1 (MQ=255)
                                                                                                          cacaGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGa                                                                                              <  3:300993/96‑1 (MQ=255)
                                                                                                          cacaGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGa                                                                                              >  4:300993/1‑96 (MQ=255)
                                                                                                          cacaGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGc                                         >  4:371183/1‑149 (MQ=255)
                                                                                                          cacaGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGc                                         >  3:276540/1‑149 (MQ=255)
                                                                                                           acaGAGCTTGCGCAATAGTCAGTTGATCTATAATATGAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGc                                         <  7:188167/148‑1 (MQ=255)
                                                                                                            caGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCgg                                       <  4:182993/149‑1 (MQ=255)
                                                                                                             agagCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTg                                                                         <  7:18979/114‑1 (MQ=255)
                                                                                                             agagCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTg                                                                         >  8:18979/1‑114 (MQ=255)
                                                                                                              gagCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGa                                     <  3:69209/149‑1 (MQ=255)
                                                                                                                gCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGAt                                    <  5:42094/148‑1 (MQ=255)
                                                                                                                 cTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATaa                                  >  3:204331/1‑149 (MQ=255)
                                                                                                                  ttGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGaa                                                                             >  8:146790/1‑105 (MQ=255)
                                                                                                                  ttGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGaa                                                                             <  7:146790/105‑1 (MQ=255)
                                                                                                                        aaTAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTa                              <  4:348261/146‑1 (MQ=255)
                                                                                                                        aaTAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTa                              >  3:348261/1‑146 (MQ=255)
                                                                                                                        aaTAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGACCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCAGCCAAGGTATGCGGGATAAGTTAt                             >  5:163769/1‑147 (MQ=255)
                                                                                                                             tCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCtt                      >  5:228633/1‑149 (MQ=255)
                                                                                                                               aGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAAtg                                                                                                                          <  7:153981/47‑1 (MQ=255)
                                                                                                                               aGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAAtg                                                                                                                          >  8:153981/1‑47 (MQ=255)
                                                                                                                                gatGATCAAAAATATCAACTCCGGGAAGATAAAGGAGATTGAAATGCACCGGCCAGAAGAAAATCCGAAAGCGATAGCCTACGCTGTTCAACCTGAAGCAGGAATCGGTGCTGCTGCCAAGCTATGCCGGAAAAGTTATCAGTCttag                    >  8:314992/3‑146 (MQ=255)
                                                                                                                                      cTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAAt             >  6:83012/1‑149 (MQ=255)
                                                                                                                                      cTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAAt             >  4:286676/1‑149 (MQ=255)
                                                                                                                                        ataataTCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATgg           >  2:243780/1‑149 (MQ=255)
                                                                                                                                         taataTCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAAt             <  4:27586/146‑1 (MQ=255)
                                                                                                                                         taaaaTCAACTCCTGGTTGATAAAGGAGATTGAAATGCTGCTGCCCGAAGAATTTCCGAATGTTATAGCGTTCGGTTTTGAAGCTTTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAAt             <  7:241979/146‑1 (MQ=255)
                                                                                                                                         ctttatCAACCCGGAGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCt                       >  2:305792/4‑136 (MQ=255)
                                                                                                                                         ctttatCAACCCGGAGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCt                       <  1:305792/133‑1 (MQ=255)
                                                                                                                                         ctttatCAACCCGGAGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGa                   <  4:74682/137‑1 (MQ=255)
                                                                                                                                         ctttatCAACCCGGAGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGa                   >  3:74682/4‑140 (MQ=255)
                                                                                                                                             atCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAATCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTGATCAGGCTTTGAATAAATGGCGCct      >  5:104940/1‑149 (MQ=255)
                                                                                                                                               cAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCctgg    >  2:359002/1‑149 (MQ=255)
                                                                                                                                                aaCTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCctggc   <  3:356029/149‑1 (MQ=255)
                                                                                                                                                aaCTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCctgg    <  8:308388/148‑1 (MQ=255)
                                                                                                                                                 aCTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTAt                                                               >  2:301505/1‑88 (MQ=255)
                                                                                                                                                 aCTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCctggct  >  1:212485/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CACGCCTCTGCCTCGGCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCCTGGCT  >  NC_002947/3420092‑3420385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑