Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,420,243 G→A 5.9% intergenic (‑59/‑20) PP_3033 ← / → PP_3034 CI/C2 family transcriptional regulator/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,420,2430GA 5.9% 205.7 / 2.4 68intergenic (‑59/‑20)PP_3033/PP_3034CI/C2 family transcriptional regulator/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (34/30);  new base A (2/2);  total (36/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.32e-01

CTCTGCCTCGGCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCCTGGCT  >  NC_002947/3420097‑3420385
                                                                                                                                                  |                                                                                                                                              
ctctGCCTCGGCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGt                                                                                                                                              <  7:267653/149‑1 (MQ=255)
     gcTCGGCTTCTAACACCGGCATCGGCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGAt                                                                                                                                          <  6:378917/147‑1 (MQ=255)
       tCGGCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATa                                                                                                                                         >  3:334362/1‑147 (MQ=255)
         ggCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAg                                                                                                                                      <  8:257606/148‑1 (MQ=255)
          gCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAg                                                                                                                                      >  5:367403/1‑147 (MQ=255)
                   acCGGCATCGTCGAGGGCCTCAAGTAGTCGTGCGCTGAAGGCTGCGCGTAGATCATTTTTATCAAACATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAAATCCGGCTTGATAAAGGTGATTGAAAt                                                                                                                           >  8:188167/1‑149 (MQ=255)
                              cgAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCg                                                                                                                <  6:134910/149‑1 (MQ=255)
                                       cATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGc                                                                                                                   <  4:38202/137‑1 (MQ=255)
                                       cATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGc                                                                                                                   >  3:38202/1‑137 (MQ=255)
                                           tAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGaa                                                                                                   >  5:58701/1‑149 (MQ=255)
                                                   cgcTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATTGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATa                                                                                            <  5:135734/148‑1 (MQ=255)
                                                   cgcTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTcc                                                                                                      >  1:250030/1‑138 (MQ=255)
                                                   cgcTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTcc                                                                                                      <  2:250030/138‑1 (MQ=255)
                                                               cgcgTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCtttt                                                                                <  4:334362/148‑1 (MQ=255)
                                                                gcgTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATa                                                                                            <  8:337502/135‑1 (MQ=255)
                                                                gcgTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATa                                                                                            >  7:337502/1‑135 (MQ=255)
                                                                       tCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGtt                                                                       >  4:69209/1‑149 (MQ=255)
                                                                         aTTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTg                                                                      <  8:235307/148‑1 (MQ=255)
                                                                           ttttATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAg                                                                   >  7:308388/1‑149 (MQ=255)
                                                                           aaccaTCAACCCATGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAg                                                                   >  3:27586/5‑149 (MQ=255)
                                                                            tttATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAg                                                                   <  6:367403/148‑1 (MQ=255)
                                                                            tttATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAg                                                                   <  6:58701/148‑1 (MQ=255)
                                                                            accaTCAACCCATGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGaa                                                                             <  1:116209/135‑1 (MQ=255)
                                                                            accaTCAACCCATGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGaa                                                                             >  2:116209/4‑138 (MQ=255)
                                                                             ccaTCAACCCATGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGa                                                                    <  2:87972/144‑1 (MQ=255)
                                                                             ccaTCAACCCATGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGa                                                                    >  1:87972/3‑146 (MQ=255)
                                                                               aTCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTAt                                                               >  6:42094/1‑149 (MQ=255)
                                                                                  aaCCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCgg                                                            >  7:166403/1‑149 (MQ=255)
                                                                                      aTGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGtgct                                                        >  3:101954/1‑149 (MQ=255)
                                                                                         ggTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGtgctgct                                                     <  8:166403/149‑1 (MQ=255)
                                                                                              aTGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCaa                                                <  5:238006/149‑1 (MQ=255)
                                                                                                     cacaGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGa                                                                                              >  4:300993/1‑96 (MQ=255)
                                                                                                     cacaGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGa                                                                                              <  3:300993/96‑1 (MQ=255)
                                                                                                     cacaGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGc                                         >  3:276540/1‑149 (MQ=255)
                                                                                                     cacaGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGc                                         >  4:371183/1‑149 (MQ=255)
                                                                                                      acaGAGCTTGCGCAATAGTCAGTTGATCTATAATATGAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGc                                         <  7:188167/148‑1 (MQ=255)
                                                                                                       caGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCgg                                       <  4:182993/149‑1 (MQ=255)
                                                                                                        agagCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTg                                                                         >  8:18979/1‑114 (MQ=255)
                                                                                                        agagCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTg                                                                         <  7:18979/114‑1 (MQ=255)
                                                                                                         gagCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGa                                     <  3:69209/149‑1 (MQ=255)
                                                                                                           gCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGAt                                    <  5:42094/148‑1 (MQ=255)
                                                                                                            cTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATaa                                  >  3:204331/1‑149 (MQ=255)
                                                                                                             ttGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGaa                                                                             >  8:146790/1‑105 (MQ=255)
                                                                                                             ttGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGaa                                                                             <  7:146790/105‑1 (MQ=255)
                                                                                                                   aaTAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTa                              >  3:348261/1‑146 (MQ=255)
                                                                                                                   aaTAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTa                              <  4:348261/146‑1 (MQ=255)
                                                                                                                   aaTAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGACCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCAGCCAAGGTATGCGGGATAAGTTAt                             >  5:163769/1‑147 (MQ=255)
                                                                                                                        tCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCtt                      >  5:228633/1‑149 (MQ=255)
                                                                                                                          aGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAAtg                                                                                                                          <  7:153981/47‑1 (MQ=255)
                                                                                                                          aGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAAtg                                                                                                                          >  8:153981/1‑47 (MQ=255)
                                                                                                                           gatGATCAAAAATATCAACTCCGGGAAGATAAAGGAGATTGAAATGCACCGGCCAGAAGAAAATCCGAAAGCGATAGCCTACGCTGTTCAACCTGAAGCAGGAATCGGTGCTGCTGCCAAGCTATGCCGGAAAAGTTATCAGTCttag                    >  8:314992/3‑146 (MQ=255)
                                                                                                                                 cTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAAt             >  6:83012/1‑149 (MQ=255)
                                                                                                                                 cTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAAt             >  4:286676/1‑149 (MQ=255)
                                                                                                                                   ataataTCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATgg           >  2:243780/1‑149 (MQ=255)
                                                                                                                                    taataTCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAAt             <  4:27586/146‑1 (MQ=255)
                                                                                                                                    taaaaTCAACTCCTGGTTGATAAAGGAGATTGAAATGCTGCTGCCCGAAGAATTTCCGAATGTTATAGCGTTCGGTTTTGAAGCTTTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAAt             <  7:241979/146‑1 (MQ=255)
                                                                                                                                    ctttatCAACCCGGAGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCt                       >  2:305792/4‑136 (MQ=255)
                                                                                                                                    ctttatCAACCCGGAGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCt                       <  1:305792/133‑1 (MQ=255)
                                                                                                                                    ctttatCAACCCGGAGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGa                   >  3:74682/4‑140 (MQ=255)
                                                                                                                                    ctttatCAACCCGGAGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGa                   <  4:74682/137‑1 (MQ=255)
                                                                                                                                        atCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAATCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTGATCAGGCTTTGAATAAATGGCGCct      >  5:104940/1‑149 (MQ=255)
                                                                                                                                          cAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCctgg    >  2:359002/1‑149 (MQ=255)
                                                                                                                                           aaCTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCctggc   <  3:356029/149‑1 (MQ=255)
                                                                                                                                           aaCTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCctgg    <  8:308388/148‑1 (MQ=255)
                                                                                                                                            aCTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTAt                                                               >  2:301505/1‑88 (MQ=255)
                                                                                                                                            aCTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCctggct  >  1:212485/1‑149 (MQ=255)
                                                                                                                                                cGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGAt                                    <  5:91314/111‑1 (MQ=255)
                                                                                                                                                cGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGAt                                    >  6:91314/1‑111 (MQ=255)
                                                                                                                                                  |                                                                                                                                              
CTCTGCCTCGGCTTCTAACACCGGCATCGTCGAGGGCCTCATGTAGTCGTGCGCTGAAGGCTGCGCGTAGCTCATTTTTATCAACCATGGGTTGATGGTTGCACAGAGCTTGCGCAATAGTCAGTTGATCTATAATATCAACTCCGGGTTGATAAAGGAGATTGAAATGCTGCGGCCCGAAGAATTTCCGAATGCGATAGCGTTCGCTTTTGAAGCTGTTGGAGGTATCGGTGCTGCTGCCAAGGTATGCGGGATAAGTTATCAGGCTTTGAATAAATGGCGCCTGGCT  >  NC_002947/3420097‑3420385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑