| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,748,871 | G→T | 6.4% | intergenic (‑111/+84) | kefB‑II ← / ← PP_3312 | glutathione‑regulated potassium/H+ antiporter/heat shock protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,748,871 | 0 | G | T | 6.4% | 243.0 / 6.2 | 78 | intergenic (‑111/+84) | kefB‑II/PP_3312 | glutathione‑regulated potassium/H+ antiporter/heat shock protein |
| Reads supporting (aligned to +/- strand): ref base G (37/36); new base T (3/2); total (40/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.16e-01 | |||||||||||
CCAACAACAGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGATAC > NC_002947/3748727‑3749016 | ccAACAACAGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAg > 6:110918/1‑149 (MQ=255) aacaGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTcc > 8:52744/1‑149 (MQ=255) acaGTCCTGCCTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCTGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTGGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCg < 4:10799/149‑1 (MQ=255) aGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCCGCTTCCGGt > 8:348855/1‑149 (MQ=255) aGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGt < 7:156400/149‑1 (MQ=255) tCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTg > 8:13394/1‑148 (MQ=255) cTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCTGCCGCTTccca > 7:257382/1‑142 (MQ=255) cTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCTGCCGCTTccca < 8:257382/144‑3 (MQ=255) cGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCaa < 4:59784/149‑1 (MQ=255) gTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTg < 1:275376/142‑1 (MQ=255) gTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTg > 2:275376/1‑142 (MQ=255) cTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTg‑aag < 2:304081/149‑1 (MQ=255) cTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTg > 2:78176/1‑146 (MQ=255) cGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAacac > 2:221993/1‑149 (MQ=255) ccATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACAcccg < 4:141337/149‑1 (MQ=255) ccATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACAcccg > 3:341029/1‑149 (MQ=255) cTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACAcccgc < 4:348380/144‑1 (MQ=255) cTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACAcccgc > 3:348380/1‑144 (MQ=255) ttCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTg‑aa > 2:205782/1‑132 (MQ=255) ttCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTg‑aa < 1:205782/132‑1 (MQ=255) cAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTcgc > 1:144328/1‑149 (MQ=255) gTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGcgggcggg > 2:301353/1‑148 (MQ=255) cAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTaa > 7:286296/1‑149 (MQ=255) ggACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTcgc > 5:288350/1‑137 (MQ=255) ggACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTcgc < 6:288350/137‑1 (MQ=255) gACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCaggt < 1:199166/129‑1 (MQ=255) gACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCaggt > 2:199166/1‑129 (MQ=255) aCCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACt < 2:144328/149‑1 (MQ=255) cGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCTCTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTgg < 2:133245/149‑1 (MQ=255) ggTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGt < 4:341029/149‑1 (MQ=255) gTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTg‑aa > 6:130821/1‑105 (MQ=255) gTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTg‑aa < 5:130821/105‑1 (MQ=255) ttATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGa > 3:231562/1‑149 (MQ=255) ttATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGa > 8:339809/1‑149 (MQ=255) aTGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGa < 1:78176/148‑1 (MQ=255) aTGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGAc > 5:2207/1‑148 (MQ=255) gagaAAGTACCGGACGAATTATCGCT‑GGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAggg > 4:229609/1‑149 (MQ=255) gaAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAgggg < 8:286296/149‑1 (MQ=255) aaGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCt < 7:13394/149‑1 (MQ=255) ccGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTccc < 5:110918/149‑1 (MQ=255) cGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTcccc < 6:2207/149‑1 (MQ=255) gAATTATCGCTGAGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGcc > 8:56512/1‑149 (MQ=255) ctggCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAAcc < 3:229609/147‑1 (MQ=255) ggCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCt < 7:348855/148‑1 (MQ=255) ggCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTc < 7:52744/149‑1 (MQ=255) gCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCg < 1:301353/149‑1 (MQ=255) tctcAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATg > 1:42710/1‑149 (MQ=255) tcAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATgcg > 7:307137/1‑149 (MQ=255) cAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTg < 8:226111/109‑1 (MQ=255) cAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCAGCAGGTAGGTCGCGGGCGGGTAATACTGGTg > 7:226111/1‑109 (MQ=255) ttCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTg > 4:198667/1‑149 (MQ=255) ccTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCa > 4:45843/1‑148 (MQ=255) ctaggATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACt > 2:259732/4‑149 (MQ=255) tgCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCAcgcg > 4:256909/1‑149 (MQ=255) gCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACgcgc > 2:122287/1‑149 (MQ=255) gCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACgcgc > 2:322749/1‑149 (MQ=255) cAATATCCTCTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCg < 4:199617/141‑1 (MQ=255) cAATATCCGCTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCg > 3:199617/1‑141 (MQ=255) cAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCgct > 5:337281/1‑149 (MQ=255) aaTATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTc > 8:304334/1‑139 (MQ=255) aaTATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTc < 7:304334/139‑1 (MQ=255) aaTATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCgctt < 1:322749/149‑1 (MQ=255) tCCACTGCATGGGAAGCGGCAGCTTCCGGTTGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCgcttgctt < 3:45843/149‑1 (MQ=255) ccACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCCcttgcttg > 4:140587/1‑149 (MQ=255) cACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGcttgcttg < 1:221993/148‑1 (MQ=255) cACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTgg < 3:256909/149‑1 (MQ=255) cACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTgg < 1:259732/149‑1 (MQ=255) cACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTgg < 4:267448/149‑1 (MQ=255) ccaccggAAGCTGCCGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCaa > 5:117567/6‑149 (MQ=255) caccggAAGCTGCCGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTTGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTcgc < 1:274715/101‑1 (MQ=255) caccggAAGCTGCCGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTcgc > 2:274715/5‑105 (MQ=255) aTGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAg > 7:295707/1‑83 (MQ=255) aTGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAg < 8:295707/83‑1 (MQ=255) ggAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCg < 3:198667/148‑1 (MQ=255) ggAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGa > 4:178723/1‑149 (MQ=255) gAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGa > 5:284001/1‑148 (MQ=255) gAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGAt < 7:339809/149‑1 (MQ=255) aGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGATAc < 6:284001/149‑1 (MQ=255) | CCAACAACAGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTG‑AAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGATAC > NC_002947/3748727‑3749016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |