| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 321,741 | G→A | 9.7% | intergenic (+28/+430) | aguA → / ← PP_0267 | agmatine deiminase/ferric siderophore receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 321,741 | 0 | G | A | 9.7% | 229.7 / 11.3 | 82 | intergenic (+28/+430) | aguA/PP_0267 | agmatine deiminase/ferric siderophore receptor |
| Reads supporting (aligned to +/- strand): ref base G (41/33); new base A (3/5); total (44/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.58e-01 | |||||||||||
ATCCTGGCAAGGATCTTCCCCGACCATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCTCAC > NC_002947/321594‑321883 | aTCCTGGCAAGGATCTTCCCCGACCATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCAtgt < 7:329874/149‑1 (MQ=255) tGGCAAGGATCTTCCCCGACCATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACg > 2:225526/1‑149 (MQ=255) cAAGGATCTTCCCCGACCATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGGGGCGGCAACATTCACTGCCCGACCCAACAGTAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCACATGACGGGc < 1:299232/149‑1 (MQ=255) aaGGATCTTCCCCGACCATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCGGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGcc > 6:203572/1‑149 (MQ=255) ccccGACCATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCCGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCttttt < 5:333855/147‑1 (MQ=255) ccccGACCATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCtttttt < 3:174997/148‑1 (MQ=255) ccccGACCATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTg > 1:114344/1‑149 (MQ=255) ccccGACCATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGAAATGAATGAGAGGCCCGTCACATGACGGGCctctc < 2:270267/144‑2 (MQ=255) ccGACCATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTgcg > 2:12199/1‑149 (MQ=255) ccATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCggg > 5:303811/1‑149 (MQ=255) cATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTg > 4:311197/1‑142 (MQ=255) cATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTg < 3:311197/142‑1 (MQ=255) cATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGc < 2:114344/149‑1 (MQ=255) cATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCACATGACGGGCctc > 7:264467/1‑135 (MQ=255) cATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCACATGACGGGCctc < 8:264467/135‑1 (MQ=255) aGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTGCAGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGAc < 1:293959/149‑1 (MQ=255) aGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGAc < 5:315798/148‑1 (MQ=255) ggtgATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCg > 3:211443/1‑149 (MQ=255) gatgatCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCgg > 5:79642/1‑147 (MQ=255) atgatCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGaa < 1:12199/148‑1 (MQ=255) atgatCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAg > 3:344915/1‑149 (MQ=255) atCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCg < 6:303811/149‑1 (MQ=255) cccGGGCCGCGCGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAg > 3:117921/1‑149 (MQ=255) ccGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACg < 6:222543/111‑1 (MQ=255) ccGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACg > 5:222543/1‑111 (MQ=255) gAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCGGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACg < 5:203572/149‑1 (MQ=255) ctctTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATAc > 3:119600/1‑142 (MQ=255) ctctTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATAc < 4:119600/142‑1 (MQ=255) ctctTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGAGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTg > 4:129405/1‑148 (MQ=255) tctTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGAc < 1:281151/94‑1 (MQ=255) tctTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGAc > 2:281151/1‑94 (MQ=255) ttGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTAtt > 2:44407/1‑149 (MQ=255) gggTGGCGGCAACATTCACTGCCTGCCCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCACATGACGGGCctctca > 6:297532/1‑98 (MQ=39) gggTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCTGGAAGCCGAGCTGGCATACGTTTTGTATTg < 1:225526/148‑1 (MQ=255) gggTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCACATGACGGGCctctca < 5:297532/100‑3 (MQ=255) gcggcAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGttttt < 4:344915/148‑1 (MQ=255) aaCATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACgg < 5:247497/82‑1 (MQ=255) aaCATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACgg > 6:247497/1‑82 (MQ=255) cATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAg > 3:73154/1‑145 (MQ=255) ttCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGa > 5:324821/1‑147 (MQ=255) tCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTg < 5:223499/116‑1 (MQ=255) tCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTg > 6:223499/1‑116 (MQ=255) aCTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGc > 6:72183/1‑148 (MQ=255) ccTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGAt > 3:231963/1‑149 (MQ=255) cTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATg < 4:211443/149‑1 (MQ=255) gACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATgg > 4:31107/1‑148 (MQ=255) gACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATgg > 6:41274/1‑148 (MQ=255) ccAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACg > 8:183230/1‑149 (MQ=255) ccAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACg > 7:117127/1‑149 (MQ=255) ccAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACg > 3:55500/1‑149 (MQ=255) cAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACgg > 1:198108/1‑149 (MQ=255) aaCAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGt > 5:360414/1‑149 (MQ=255) aCAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGt > 1:132988/1‑148 (MQ=255) agcagcCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAg > 5:290532/1‑149 (MQ=255) agcCGTCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGcc < 7:183230/149‑1 (MQ=255) ccGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGTCGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCcgc < 6:79642/149‑1 (MQ=255) ggTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGa < 1:44407/149‑1 (MQ=255) ggTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGa > 1:331717/1‑149 (MQ=255) gTCAAGCGGTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGAt < 3:106808/149‑1 (MQ=255) gTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCcgc < 7:144504/140‑1 (MQ=255) gTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCcgc > 8:144504/1‑140 (MQ=255) gTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGAt < 5:72183/149‑1 (MQ=255) tCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATc > 2:287214/1‑149 (MQ=255) gcgcTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCACTTTTTAGCGCGGGCGACGCCCGGAAGCCGACCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGt > 3:307945/1‑148 (MQ=255) cTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAAc > 2:16472/1‑148 (MQ=255) g‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAAt < 6:324821/149‑1 (MQ=255) aGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAAt < 8:117127/148‑1 (MQ=255) ccGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGtt < 3:251682/90‑1 (MQ=255) ccGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGtt > 4:251682/1‑90 (MQ=255) gTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTAc < 5:41274/149‑1 (MQ=255) gTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTAc < 2:198108/149‑1 (MQ=255) atgaatgaGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTa < 4:117921/149‑1 (MQ=255) aaaaaagagGCCCGTCACATGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCaa < 4:314267/95‑1 (MQ=38) aaaaaagagGCCCGTCACATGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCaa > 3:314267/6‑100 (MQ=38) tgaGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGTGCCTCTGATCTGTAACAATACCTACGTAAATTa < 6:290532/149‑1 (MQ=255) gagGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATgg > 7:200209/1‑99 (MQ=255) gagGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATgg < 8:200209/99‑1 (MQ=255) agGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCg < 4:231963/149‑1 (MQ=255) ggCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGc < 2:331717/149‑1 (MQ=255) gCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCt > 3:371939/1‑149 (MQ=255) ccGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCTCa > 3:42683/1‑149 (MQ=255) ccGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCTCa > 7:304203/1‑149 (MQ=255) cGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCTCAc > 5:231916/1‑149 (MQ=255) | ATCCTGGCAAGGATCTTCCCCGACCATGAGGTGGTGATGATCCCGGGCCGCGAGCTGCTCTTGGGTGGCGGCAACATTCACTGCCTGACCCAACAGCAGCCGGCGCCGGTCAAGCGCTG‑AGCCCGTAATGAATGAGAGGCCCGTCATGTGACGGGCCTCTTTTTTGCGCGGGCGACGCCCGGAAGCCGAGCTGGCATACGTTTTGTATTGTTTTTCAAGCAGATAGCAAGATGGCACGGTCAGGCCGCGCCTCTGATCTGTAACAATACCTACGTAAATTAGCCGCTCAC > NC_002947/321594‑321883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |