| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,425,139 | G→C | 10.4% | intergenic (‑197/‑603) | PP_5647 ← / → PP_3917 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,425,139 | 0 | G | C | 10.4% | 224.0 / 14.2 | 77 | intergenic (‑197/‑603) | PP_5647/PP_3917 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (37/32); new base C (2/6); total (39/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.03e-01 | |||||||||||
ATATCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTGCGCGCCT > NC_002947/4424992‑4425284 | atatCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAgcgc > 5:295703/1‑149 (MQ=255) atCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATTTAAGCGGGACAGCGCCAGTAGAGAACCTAGCCCGATCACTGAGCCCGTCCAGCAGACTGAAGT‑GCAAGTAGCAAAAAG‑CCCAGcgcgt > 4:20121/1‑148 (MQ=255) atCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCgg > 1:47662/1‑149 (MQ=255) tCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CACAGCGCggg > 2:114553/1‑149 (MQ=255) gCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGgggctgggct > 8:118871/1‑149 (MQ=255) gCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCCCCgcgctgggc < 7:125400/148‑1 (MQ=255) ttAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTc > 2:295152/1‑149 (MQ=255) tAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCt > 6:142079/1‑149 (MQ=255) actGCGACCGGTGGAAACTGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCACGTCCAGCAGACAGACGT‑TCAAGTAGCAAAAAG‑CCCAGCCCCGCGCTGGGCttttt < 1:358518/146‑4 (MQ=255) aTGGGACCGGTTGATAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGATCCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCCCCGCGCTGGGCtttttgc < 6:244937/149‑6 (MQ=255) aTGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTc < 1:648/149‑1 (MQ=255) aTGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCCCCGCGCTGGGCtttttgc < 6:239473/149‑6 (MQ=255) gCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTcag > 2:22304/1‑149 (MQ=255) cGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTcag < 8:217649/148‑1 (MQ=255) gACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAGTCCCAGCGCGGGGCTGGGCTTCTGTcagc < 1:22304/149‑1 (MQ=255) gACCGGTGGAAAATCATCGGCCCTAATCATTGCTGAAAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGACCAGCAGACAGAAGT‑TAAAGTAGCAAAAAT‑CCCAGCGCGCGGCTGGGCTTATGTcag > 2:248438/1‑147 (MQ=255) aCCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTcagcag < 1:248438/149‑1 (MQ=255) ccGGTGGAAAATGATCTGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCaga < 4:241711/149‑1 (MQ=255) ggTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCagag > 6:130450/1‑148 (MQ=255) ggTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCagag < 5:130450/148‑1 (MQ=255) aaaTGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGAc > 1:229729/1‑148 (MQ=255) aaaTGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACt < 5:194179/149‑1 (MQ=255) gCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGc > 5:187554/1‑149 (MQ=255) cccTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCg < 6:295703/149‑1 (MQ=255) cccTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCg < 7:118871/149‑1 (MQ=255) cccTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGC‑GGGCTGGGCTTCt < 5:69431/121‑1 (MQ=255) cccTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGC‑GGGCTGGGCTTCt > 6:69431/1‑121 (MQ=255) cTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGtt > 4:118843/1‑149 (MQ=255) cTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAAtt < 6:18278/148‑1 (MQ=255) ccgCTGATATCTATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTAc > 3:36726/3‑149 (MQ=255) gCTGATAGCTAGCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGAGCACTGAGCCCGTCCAGCAGACAGAAGT‑GCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCt < 5:72451/123‑1 (MQ=255) gCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCCGCAGACAGAAGT‑GCAAGGAGCAAAAAG‑CCCCGCGCGGGGCGGGGCTTCTGTCAGCAGAGcg > 6:72451/1‑122 (MQ=255) gCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGc > 4:18766/1‑149 (MQ=255) atagataTCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTgg > 4:345546/1‑149 (MQ=255) aGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTc < 1:114553/149‑1 (MQ=255) aGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTc < 1:295152/149‑1 (MQ=255) aCAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATgg < 1:263203/149‑1 (MQ=255) aGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTg < 1:252662/131‑1 (MQ=255) aGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTg > 2:252662/1‑131 (MQ=255) cgcCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGgcgc < 3:18766/149‑1 (MQ=255) aGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTtgt < 3:118843/149‑1 (MQ=255) aGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGAGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTtgt > 7:317603/1‑149 (MQ=255) gagaACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGa > 8:251791/1‑147 (MQ=255) agaACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAg > 6:13162/1‑149 (MQ=255) agaACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCAAATGGGCGCTTGTGATAg > 2:242213/1‑149 (MQ=255) aaCCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCt < 2:229729/149‑1 (MQ=255) ccGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCta > 3:258935/1‑148 (MQ=255) cGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTATCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCt > 1:68556/1‑147 (MQ=255) cGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCt < 2:68556/146‑1 (MQ=255) gAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAg < 7:251791/149‑1 (MQ=255) tGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTg > 7:114014/1‑149 (MQ=255) gTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTCCCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGcac > 8:306345/1‑147 (MQ=255) tCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCt < 4:258935/149‑1 (MQ=255) cagcagACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTc > 4:263629/1‑148 (MQ=255) agacagaAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATgg < 6:187554/149‑1 (MQ=255) agacagaAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATgg > 7:215701/1‑149 (MQ=255) aaGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCgg < 5:142079/149‑1 (MQ=255) gT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTc < 6:313570/90‑1 (MQ=255) gT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTc > 5:313570/1‑90 (MQ=255) gT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCg < 4:144448/146‑1 (MQ=255) gT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCg > 3:144448/1‑146 (MQ=255) t‑tCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTg > 4:158355/1‑126 (MQ=255) t‑tCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTg < 3:158355/126‑1 (MQ=255) t‑tCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTgg < 1:242213/149‑1 (MQ=255) gCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGt < 8:114014/148‑1 (MQ=255) aaaaaG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTc > 6:362468/1‑149 (MQ=255) aaaaaG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTc > 8:233378/1‑149 (MQ=255) aaaaaG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTc > 6:226667/1‑149 (MQ=255) agaaG‑CCCAGCCCCGCGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGc > 6:315969/3‑111 (MQ=255) agaaG‑CCCAGCCCCGCGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGc < 5:315969/109‑1 (MQ=255) aaaaG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCt > 8:32451/1‑149 (MQ=255) aaG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTgc < 8:215701/149‑1 (MQ=255) aaG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTgc < 5:226667/149‑1 (MQ=255) aaG‑CCCAGCCCCGCGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCtt > 2:180265/1‑141 (MQ=255) aaG‑CCCAGCCCCGCGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCtt < 1:180265/141‑1 (MQ=255) ccAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGAt < 7:292688/112‑1 (MQ=255) ccAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGAt > 8:292688/1‑112 (MQ=255) cAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTTTTTCTGCGCGcc > 4:70810/1‑149 (MQ=255) aGCGCGCGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGATATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTGCGCGCCt > 6:92526/1‑149 (MQ=255) | ATATCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGT‑TCAAGTAGCAAAAAG‑CCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTGCGCGCCT > NC_002947/4424992‑4425284 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |