| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,461,894 | T→A | 6.3% | L128M (TTG→ATG) | PP_3955 → | permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,461,894 | 0 | T | A | 6.3% | 235.1 / 4.8 | 79 | L128M (TTG→ATG) | PP_3955 | permease |
| Reads supporting (aligned to +/- strand): ref base T (32/42); new base A (3/2); total (35/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.70e-01 | |||||||||||
GAATGGCGACGGCTGCATACCAGTGGTACTTCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTCGGCACCGAAGGGCTGTATGGCACACCGACCTAT > NC_002947/4461751‑4462040 | gAATGGCGACGGCTGCATACCAGTCGTACTGCGAAGGGCATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGccc < 8:256603/149‑1 (MQ=255) gCGACGGCTGCATACCAGTGGTACTTCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCcatca < 3:214252/148‑1 (MQ=255) aCGGCTGCATACCAGTGGTACTTCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTg < 2:281845/149‑1 (MQ=255) ccAGTGGTACTTCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGttt < 7:196001/148‑1 (MQ=255) ccAGTGGTACTTCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGttt < 7:201587/148‑1 (MQ=255) cAGTGGTACTTCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCt > 3:58546/1‑149 (MQ=255) aGTGGTACTTCGAACGGGATCTGATTCAACGCTCCGGTGATCTGAACACCAGTGACCTGATCGTTGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTg < 6:190019/149‑1 (MQ=255) gTGGTACTTCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTgg > 7:222318/1‑149 (MQ=255) gTACTTCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGCGAATAGCGTTGCCCATCATTTGCGACCTGTTTCTGGcc > 8:79774/1‑148 (MQ=255) ttCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCcatc > 8:42489/1‑123 (MQ=255) ttCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCcatc < 7:42489/123‑1 (MQ=255) ttCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATgg > 2:166754/1‑149 (MQ=255) cGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGt > 5:108287/1‑149 (MQ=255) cGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGt > 4:63507/1‑149 (MQ=255) gggATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCtt > 4:277807/1‑149 (MQ=255) ggATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTg < 6:312405/149‑1 (MQ=255) ggATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTGGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTg < 7:221096/149‑1 (MQ=255) gATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTgg > 6:223036/1‑149 (MQ=255) tCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGc > 3:92274/1‑148 (MQ=255) gATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCAttt > 6:90741/1‑113 (MQ=255) gATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCAttt < 5:90741/113‑1 (MQ=255) gATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCaa > 2:185426/1‑148 (MQ=255) aTTCAACGCTCCGGTGATCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGc < 6:280225/144‑1 (MQ=255) aTTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCaa < 4:58546/147‑1 (MQ=255) aTTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCaa < 3:277807/147‑1 (MQ=255) aCGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGc < 8:222318/149‑1 (MQ=255) aCGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGc < 8:105809/149‑1 (MQ=255) gCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTg < 5:332964/131‑1 (MQ=255) gCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTg > 6:332964/1‑131 (MQ=255) gCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGc > 5:41523/1‑147 (MQ=255) ggTGAGCTGACCACCAGTGACCTGATCGTGGGGCTCTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGACCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCg > 5:42262/1‑148 (MQ=255) tGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAAc > 6:233091/1‑149 (MQ=255) cTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTcgc < 1:205749/149‑1 (MQ=255) gACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTcgcg > 7:285663/1‑148 (MQ=255) accaccAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCgcgc < 3:300971/148‑1 (MQ=255) ccaGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATc > 5:177484/1‑147 (MQ=255) ccaGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGa < 1:166754/149‑1 (MQ=255) caGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAg < 2:223559/149‑1 (MQ=255) aCCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTa < 5:193149/148‑1 (MQ=255) ccTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAAc < 7:1709/131‑1 (MQ=255) ccTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAAc > 8:1709/1‑131 (MQ=255) tGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGAt > 2:111617/1‑149 (MQ=255) ggggCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATc < 6:41523/149‑1 (MQ=255) gggCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCCGTAGCCTCGAtg < 3:63507/148‑2 (MQ=255) gCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCAttt < 2:168354/68‑1 (MQ=255) gCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCAttt > 1:168354/1‑68 (MQ=255) gCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTAATGGGCTTAGCGTTGCCCATCATTTGGGCCCTGTTTCTGGCCTATGGTTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCCGTAGCCTCGAtgcgc < 6:42262/149‑5 (MQ=255) gCTGTTGCTTATTGGTTTGGGCTTTGAAGCCGCGCCACGCGTCATGGGCATACCGTGGCCCATCTTTTGCGCCCTGTTTCTGGCCTAGGGGTGGCTTGGCCAACACTTGCCAGGTGAACTCGCGCATCGAGGCTACGGCCTCGATCAGa < 1:242633/149‑1 (MQ=255) tGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAgg < 7:355526/130‑1 (MQ=255) tGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAgg > 8:355526/1‑130 (MQ=255) ttGCTTCTTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTATGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATc < 5:89836/147‑1 (MQ=255) gCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTc < 1:111617/148‑1 (MQ=255) cTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCaa > 8:67454/1‑149 (MQ=255) cTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCaa > 6:262709/1‑149 (MQ=255) ttATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCACCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCaa > 3:211052/1‑148 (MQ=255) aTTGGGTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAAt < 2:83355/147‑1 (MQ=255) gtttggtCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGtt < 7:79774/148‑1 (MQ=255) gtttggtCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGtt < 6:177484/148‑1 (MQ=255) gtCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATgg > 2:320575/1‑71 (MQ=255) gtCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATgg < 1:320575/71‑1 (MQ=255) gtCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCtt < 4:92274/149‑1 (MQ=255) gtCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCtt < 6:169126/149‑1 (MQ=255) tCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTc < 1:185426/149‑1 (MQ=255) tCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTc > 4:269981/1‑149 (MQ=255) tttGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCTACACTTGCCAGGCGCACTCGCGCATCGAGGCTAGGGCCTCGTTCAGTTCGTCATGCAGTTGGCCTTCgg > 3:274858/1‑149 (MQ=255) gcgcgACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCa > 4:28294/1‑116 (MQ=255) gcgcgACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCa < 3:28294/116‑1 (MQ=255) cgcgACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTCGGCACCGAAggg < 5:233091/149‑1 (MQ=255) aaatgaTGGGCAACGCTATGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTCGGCACCGAAGGGCTGTAt > 8:59376/6‑149 (MQ=255) atgaTGGGCAACGCTATGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGa > 7:165199/4‑90 (MQ=255) atgaTGGGCAACGCTATGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGa < 8:165199/87‑1 (MQ=255) tCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGc < 2:20444/74‑1 (MQ=255) tCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGc > 1:20444/1‑74 (MQ=255) gaTGGGCAACGCTATGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTCGGCACCGAAgg < 1:3141/137‑1 (MQ=255) gaTGGGCAACGCTATGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTCGGCACCGAAgg > 2:3141/2‑138 (MQ=255) cATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTCGGCACCGAAGGGCTGTATGGca < 7:229481/143‑1 (MQ=255) cATAGCGTTGCCCATCATTTGCGCCCTCTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTCGGCACCGAAGGGCTGTATGGca > 8:229481/1‑143 (MQ=255) cGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTCGGCACCGAAGGGCTGTATGGCACACCGACCTAt > 2:211823/1‑149 (MQ=255) cGTTGCCCACCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTCGGCACCGAAGGGCTGTATGGCACACCGACCTAt < 4:211052/149‑1 (MQ=255) | GAATGGCGACGGCTGCATACCAGTGGTACTTCGAAGGGGATCTGATTCAACGCTCCGGTGAGCTGACCACCAGTGACCTGATCGTGGGGCTGTTGCTTATTGGTTTGGTCTTTGAAGCCGCGCGACGCGTCATGGGCATAGCGTTGCCCATCATTTGCGCCCTGTTTCTGGCCTATGGGTTGCTTGGCCAACACTTGCCAGGCGAACTCGCGCATCGAGGCTACGGCCTCGATCAGATCGTCAATCAGTTGGCCTTCGGCACCGAAGGGCTGTATGGCACACCGACCTAT > NC_002947/4461751‑4462040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |