| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,501,300 | A→T | 11.8% | intergenic (‑239/+16) | PP_3989 ← / ← PP_t60 | DNA‑cytosine methyltransferase/tRNA‑Ser |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,501,300 | 0 | A | T | 11.8% | 176.8 / 9.9 | 66 | intergenic (‑239/+16) | PP_3989/PP_t60 | DNA‑cytosine methyltransferase/tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base A (28/30); new base T (2/6); total (30/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAACACGC > NC_002947/4501155‑4501444 | gCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGaataat > 6:223961/1‑147 (MQ=255)gCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGaataat > 3:162483/1‑147 (MQ=255) gggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAT‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCttt > 6:79155/1‑149 (MQ=255) ggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGATTATTCAGGGCtttt < 2:340583/149‑2 (MQ=255) ggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTg < 6:356597/149‑1 (MQ=255) gAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGATTATTCAGGGCttttt < 2:126926/149‑3 (MQ=255) gAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGATTATTCAGGGCttttt < 3:273923/149‑3 (MQ=255) gAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGATTATTCAGGGCttttt < 8:144104/149‑3 (MQ=255) caGCGCCTCACGCCAACCCGAAGCAGCCCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGATTATTCAGGGCtttttg < 6:251894/148‑4 (MQ=255) gcgTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACTGAAGGGAA‑AAAACTAGAGCCGCAGAAACGCAAAAAGCCATGAATATGCAGGGCTTTGAttat > 1:280175/1‑149 (MQ=255) gcgTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATg > 5:288500/1‑149 (MQ=255) gcgTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATg > 3:216228/1‑149 (MQ=255) cgTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAATAGCCCTGAATAATCAGGGCTTTGAATATgg < 1:33298/149‑1 (MQ=255) gTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAATTAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATgg < 1:293795/149‑1 (MQ=255) aCGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCgg < 4:144647/148‑1 (MQ=255) cttGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTag < 7:101410/147‑1 (MQ=255) gAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTa > 3:347721/1‑145 (MQ=255) gcagcTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTaga > 5:139689/1‑144 (MQ=255) gcagcTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTaga < 6:139689/144‑1 (MQ=255) gcagcTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTc < 4:347721/149‑1 (MQ=255) agcTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCg > 1:186843/1‑148 (MQ=255) gcTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGaa < 3:129490/149‑1 (MQ=255) tCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAAc > 3:325454/1‑148 (MQ=255) gCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGaataat < 3:343149/108‑1 (MQ=255) gCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGaataat > 4:343149/1‑108 (MQ=255) gCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAActct < 4:216228/149‑1 (MQ=255) cATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGt > 3:221538/1‑149 (MQ=255) aTGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGtt < 6:288500/149‑1 (MQ=255) aTGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGtt > 2:208387/1‑149 (MQ=255) tgtCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGc < 4:162483/148‑1 (MQ=255) gC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGAc < 2:186843/148‑1 (MQ=255) ggAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGc > 7:78187/1‑138 (MQ=255) ggAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGc < 8:78187/138‑1 (MQ=255) gAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTag > 3:102915/1‑113 (MQ=255) gAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTag < 4:102915/113‑1 (MQ=255) aaaCGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGttt < 4:221538/149‑1 (MQ=255) aCGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTc < 4:325454/149‑1 (MQ=255) gagaATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCg > 8:229845/1‑149 (MQ=255) gaATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGtt < 8:11809/149‑1 (MQ=255) aTTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTATGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGc < 5:223961/149‑1 (MQ=255) cGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCtt > 8:84078/1‑148 (MQ=255) cGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCtt < 1:208387/148‑1 (MQ=255) gAAACGACCAGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGTCTTTGAATATGGCGGAAGCGTAGAGATTGGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTaaa < 6:96889/149‑1 (MQ=255) gATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑a > 3:229047/1‑149 (MQ=255) aTGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGaa < 3:153406/90‑1 (MQ=255) aTGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGaa > 4:153406/1‑90 (MQ=255) gACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGc > 1:201161/1‑149 (MQ=255) cAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCt > 3:320033/1‑148 (MQ=255) aGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTc > 1:169912/1‑149 (MQ=255) gggAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGc < 4:229047/149‑1 (MQ=255) gAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCtt > 4:339663/1‑50 (MQ=255) gAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCtt < 3:339663/50‑1 (MQ=255) aa‑aaaaCTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAg < 6:65754/111‑1 (MQ=255) aa‑aaaaCTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAg > 5:65754/1‑111 (MQ=255) tAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCg < 5:79155/149‑1 (MQ=255) agCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGgcc < 2:201161/149‑1 (MQ=255) ccTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCA‑ACGCTTCCAGCTCGTTTTGCGgccgc > 7:143530/1‑149 (MQ=255) aGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCat > 8:107811/1‑148 (MQ=255) aaCGCAAAAAGCCCTGAATAATCAGGGGGTTGAATATGGCGGAAGCGTAGAGGTTCGGACTGTAGGATAGTTGCCCAGCCACGGTTTTGAAGAACGTTTCCTTAAACCACACGGCC‑CCGCGTGCAGCTCGTTTTGCGGCCGCCataata > 6:302377/1‑149 (MQ=25) aaCGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCataata > 4:219734/1‑149 (MQ=255) aCGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATAc > 7:188579/1‑149 (MQ=255) aCGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATAc < 7:84078/149‑1 (MQ=255) aaaaaGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCAACGCTTCCAGCTCGTTTTGCGGCCGCCataat < 1:44498/144‑1 (MQ=255) aaaaaGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCataat > 2:44498/1‑143 (MQ=255) aaaaGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTaa < 4:320033/149‑1 (MQ=255) aaGCCCTGATTATTCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATAc > 2:230082/1‑142 (MQ=255) aaGCCCTGATTATTCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATAc < 1:230082/142‑1 (MQ=255) aaGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATg < 7:107811/149‑1 (MQ=255) cccTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGACCATCGACGGTTTTCAAGACCGTTGCCTTAAACAACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGaaa > 3:308963/1‑149 (MQ=255) tGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCATAACCCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAacac > 4:228464/1‑149 (MQ=255) aataatCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAacac < 7:229845/147‑1 (MQ=255) aataatCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAACACGc > 6:8495/1‑149 (MQ=255) | GCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGC‑GGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAA‑AAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCC‑ACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAACACGC > NC_002947/4501155‑4501444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |