Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,517,188 C→A 9.5% intergenic (+25/+61) infA → / ← clpA translation initiation factor IF‑1/ATP‑dependent serine protease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,517,1880CA 9.5% 186.9 / 9.4 63intergenic (+25/+61)infA/clpAtranslation initiation factor IF‑1/ATP‑dependent serine protease
Reads supporting (aligned to +/- strand):  ref base C (26/31);  new base A (3/3);  total (29/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.99e-01

ACCGCGCACATCTCCGGAAAGATGCGCAAGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGC  >  NC_002947/4517041‑4517332
                                                                                                                                                   |                                                                                                                                                
aCCGTGCACATCTCCGGAAAGATGCGCAAGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCa                                                                                                                                                 <  2:190455/149‑1 (MQ=255)
aCCGCGCACATCTCCGGAAAGATGCGCAAGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCa                                                                                                                                                 <  3:364806/149‑1 (MQ=255)
         aTCTCCGGAAAGATGCGCAAGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTCACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCggg                                                                                                                                        >  7:42466/1‑149 (MQ=255)
              cGGAAAGATGCGCAAGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCtttt                                                                                                                                   <  7:62970/149‑1 (MQ=255)
                gAAAGATGCGCAAGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCtttttt                                                                                                                                 <  2:242884/149‑1 (MQ=255)
                  aaGATGCGCAAGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCACCTGGCCGGGCtttttcat                                                                                                                               <  8:83376/149‑4 (MQ=255)
                   aGATGCGCAAGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTtgtg                                                                                                                              <  3:199206/149‑1 (MQ=255)
                     aTGCGCAAGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGcc                                                                                                                            >  1:365068/1‑149 (MQ=255)
                           aaGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAg                                                                                                                       >  8:120981/1‑148 (MQ=255)
                           aaGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCACAAg                                                                                                                       >  5:85779/1‑148 (MQ=255)
                               aCTAGATCCCCATTCTCCCTGCCGACTAGCTCCGCGGCGAACTGCCGCCGTACGACCTGAGCAAGGGCCGCATCAGCTACCGTCCGCGCTAGCTCAAGCCATGAAAAAGGCCGGCCAGGTGGCGGGCTTTTTTGTGCCTCAAGAAATTg                                                                                                                 <  4:228594/149‑1 (MQ=255)
                                   cATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGc                                                                                                                <  3:152769/147‑1 (MQ=255)
                                        gCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCt                                                                                                         <  1:233030/149‑1 (MQ=255)
                                              tcACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAgg                                                                                                   >  2:240/1‑149 (MQ=255)
                                              tcACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAgg                                                                                                   >  3:223954/1‑149 (MQ=255)
                                               cACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGACATGAAAAAGCCCGGACAGGTGCCGGGCTTTTTTGTGCCTCAAGAGATTGCAGGGGCTGCAAgg                                                                                                   >  8:194013/1‑148 (MQ=255)
                                                  tGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGc                                                                                               >  8:312539/1‑149 (MQ=255)
                                                      gACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCt                                                                                           <  2:285117/149‑1 (MQ=255)
                                                       aCAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCCTTGCAGCCCCTg                                                                                          <  7:120981/149‑1 (MQ=255)
                                                           ggTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGcaca                                                                                      >  2:300236/1‑149 (MQ=255)
                                                           ggTCCGCGTCGAACTGACGCCGTACGACCTGACCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGcaca                                                                                      <  7:312539/149‑1 (MQ=255)
                                                            gTCCGCGTCGAACTAACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACAt                                                                                     >  6:96730/1‑149 (MQ=255)
                                                             tCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATc                                                                                    <  4:244495/149‑1 (MQ=255)
                                                                   tccaaCTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGGGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGa                                                                              <  2:154919/146‑1 (MQ=255)
                                                                      aaCTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCt                                                                           >  2:255173/1‑149 (MQ=255)
                                                                       aCTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTc                                                                          <  1:255173/149‑1 (MQ=255)
                                                                               cGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTgg                                                                  >  2:135989/1‑149 (MQ=255)
                                                                                  aCGACCTGATCAAGGGCCGCATCACCTACCGTGCGCCCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCCGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGttt                                                               <  6:315312/149‑1 (MQ=255)
                                                                                   cGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTc                                                              <  8:42466/149‑1 (MQ=255)
                                                                                     aCCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAg                                                                                                              >  8:316585/1‑99 (MQ=255)
                                                                                     aCCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAg                                                                                                              <  7:316585/99‑1 (MQ=255)
                                                                                     aCCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGa                                                            <  6:153743/149‑1 (MQ=255)
                                                                                      ccTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGaa                                                           <  4:223954/149‑1 (MQ=255)
                                                                                          aGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGt                                                         <  5:96730/147‑1 (MQ=255)
                                                                                             aaGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGaa                                                     <  1:240/148‑1 (MQ=255)
                                                                                                         aCCTACCGTGCGCGGTTAGCTCTAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCACAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGcc                                         <  6:85779/148‑1 (MQ=255)
                                                                                                         aCCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCa                                        >  5:26191/1‑149 (MQ=255)
                                                                                                          ccTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCAt                                       >  8:338980/1‑149 (MQ=255)
                                                                                                           cTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGttt                                                               >  5:288621/1‑124 (MQ=255)
                                                                                                           cTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGttt                                                               <  6:288621/124‑1 (MQ=255)
                                                                                                              ccGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATcg                                     <  1:135989/147‑1 (MQ=255)
                                                                                                                 tGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAg                                >  1:129680/1‑149 (MQ=255)
                                                                                                                 tGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAg                                >  5:313832/1‑149 (MQ=255)
                                                                                                                     cgcTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCg                            <  7:338980/149‑1 (MQ=255)
                                                                                                                      gcTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGa                           >  1:107516/1‑149 (MQ=255)
                                                                                                                       cTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGAc                          <  2:365068/149‑1 (MQ=255)
                                                                                                                            cTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGca                     >  4:293075/1‑149 (MQ=255)
                                                                                                                               aaGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAg                                                          >  2:147079/1‑109 (MQ=255)
                                                                                                                               aaGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAg                                                          <  1:147079/109‑1 (MQ=255)
                                                                                                                                  ccATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGc               >  8:267038/1‑149 (MQ=255)
                                                                                                                                   cacaaaaaaGCCCGGCACCTGGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGc               >  7:303655/5‑148 (MQ=255)
                                                                                                                                   cATGAAAAAGCCCGGCCAGGTGGCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGCACACCAGTTCGCCATCGCGCAGGTCGCCATGCCCCACGcc              >  7:241463/1‑149 (MQ=255)
                                                                                                                                    acaaaaaaGCCCGGCACCTGGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGc                      <  7:152774/137‑1 (MQ=255)
                                                                                                                                    acaaaaaaGCCCGGCACCTGGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGc                      >  8:152774/4‑140 (MQ=255)
                                                                                                                                    aTGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTc                                                        <  4:164222/106‑1 (MQ=255)
                                                                                                                                    aTGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTc                                                        >  3:164222/1‑106 (MQ=255)
                                                                                                                                     caaaaaaGCCCGGCACCTGGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTc                                                        >  5:296242/3‑105 (MQ=38)
                                                                                                                                     caaaaaaGCCCGGCACCTGGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTc                                                        <  6:296242/103‑1 (MQ=38)
                                                                                                                                             cccGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCg    >  1:245268/1‑149 (MQ=255)
                                                                                                                                               cGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATc                                      <  4:149415/113‑1 (MQ=255)
                                                                                                                                               cGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATc                                      >  3:149415/1‑113 (MQ=255)
                                                                                                                                               cGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGc  <  1:300236/149‑1 (MQ=255)
                                                                                                                                               cGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGc  <  2:107516/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
ACCGCGCACATCTCCGGAAAGATGCGCAAGAACTACATCCGCATTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGC  >  NC_002947/4517041‑4517332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: