| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,521,227 | A→G | 5.5% | S171P (TCG→CCG) | icd ← | NADP(+)‑specific isocitrate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,521,227 | 0 | A | G | 5.5% | 218.2 / 2.0 | 73 | S171P (TCG→CCG) | icd | NADP(+)‑specific isocitrate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (35/34); new base G (2/2); total (37/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.25e-01 | |||||||||||
CCACGTATTGCAGGGCCTTGCGCACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGCATACATACAGGTCCAGTTGCTG > NC_002947/4521080‑4521374 | ccacGTATTGCAGGGCCTTGCGCACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGAc > 4:6773/1‑149 (MQ=255)ccacGTATTGCAGGGCCTTGCGCACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGAc > 1:46508/1‑149 (MQ=255) ttGCAGGGCCTTGCGCACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGcc < 2:181709/148‑1 (MQ=255) cAGGGCCTTGCGCACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGCTGACCCCCATTTCCTCCTTGAGAATCTTGATCACCTTGTTCGGCTCGGGCGACCCGGCCTTc < 6:276306/148‑1 (MQ=255) ccTTGCGCACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGGCCCGGCCTTCCACTc > 2:242448/1‑148 (MQ=255) ccTTGCGCACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGGCCCGGCCTTCCACTc > 4:138593/1‑148 (MQ=255) cTTGCGCACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCg > 6:357413/1‑148 (MQ=255) cTTGCGCACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCg < 5:357413/148‑1 (MQ=255) cTTGCGCACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGa < 3:342002/149‑1 (MQ=255) cACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCgg > 5:125994/1‑149 (MQ=255) ccAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCa > 1:203801/1‑149 (MQ=255) cAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCa > 5:23524/1‑148 (MQ=255) cAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCa > 5:175108/1‑148 (MQ=255) gTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTc < 6:23524/149‑1 (MQ=255) aCCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGTGGGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCACGGGCGACCCGCCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCg > 1:268950/1‑149 (MQ=255) cccTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGa < 3:36386/149‑1 (MQ=255) cctcctTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAg > 4:272853/1‑149 (MQ=255) ctcctTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGt > 1:101970/1‑149 (MQ=255) ttCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTtctc > 4:265668/1‑149 (MQ=255) gACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCGTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTcgcg > 5:328175/1‑149 (MQ=255) gACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTcgc < 2:268950/148‑1 (MQ=255) gACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTcgc < 3:6773/148‑1 (MQ=255) gACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTcgc < 3:272853/148‑1 (MQ=255) acacCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTcgcg > 3:190027/1‑148 (MQ=255) ccGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCGCTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAg < 5:238026/149‑1 (MQ=255) aCGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGa > 7:77445/1‑139 (MQ=255) aCGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGa < 8:77445/139‑1 (MQ=255) gCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCTCCATGt > 8:209225/1‑149 (MQ=255) tACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACg < 4:190027/149‑1 (MQ=255) ggATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGGCCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGTAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCggg < 3:138593/149‑1 (MQ=255) ggATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGGCCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCACCCGGCTTTTTCACCggg < 1:242448/149‑1 (MQ=255) ggTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCttttt > 7:69593/1‑135 (MQ=255) ggTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCttttt < 8:69593/135‑1 (MQ=255) ggTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTgg < 2:101970/147‑1 (MQ=255) ggTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGca > 1:142659/1‑149 (MQ=255) gTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGcac < 1:21054/149‑1 (MQ=255) gACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTg > 2:70480/1‑143 (MQ=255) gACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTg < 1:70480/143‑1 (MQ=255) ccccATTTCCTCCTTGATAAACTTGATCACCTTCTTCGCCTCGGGCGACCCGGCCTTCCACTATATACCGGCATAG‑ATGT‑CTTCGGAGATCTCGCGGAAGATCACCCTGTCGACGTCGCACGGCTTTTTCCCCGGGCATGGCACACCCt > 6:316116/1‑149 (MQ=255) ccccATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCTGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTc < 1:331674/111‑1 (MQ=255) ccccATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCTGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTc > 2:331674/1‑111 (MQ=255) ccccATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCt < 2:203801/149‑1 (MQ=255) cccATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTg < 3:265668/149‑1 (MQ=255) cATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATc > 5:368715/1‑100 (MQ=255) cATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATc < 6:368715/100‑1 (MQ=255) cATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGt < 4:365692/107‑1 (MQ=255) cATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGt > 3:365692/1‑107 (MQ=255) cATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGa < 1:366797/149‑1 (MQ=255) ctcctTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACcaca < 6:129961/149‑1 (MQ=255) ctcctTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACcac < 2:46508/148‑1 (MQ=255) tcctTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAGAATGTGCTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACca > 1:307645/1‑148 (MQ=255) tcctTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAg > 3:125722/1‑149 (MQ=255) tcctTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACAGGGCTTGGCACACCCTGGAACCACAg > 4:118982/1‑149 (MQ=255) ttGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCAc > 5:245999/1‑149 (MQ=255) tGAGAAACTTGATCACCTTGTTTGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGcccc > 7:241269/1‑149 (MQ=255) gagaAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCg > 1:5929/1‑149 (MQ=255) gagaAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCg > 4:107596/1‑149 (MQ=255) gaAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGc < 4:125722/149‑1 (MQ=255) aaaCTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGcc > 2:55388/1‑149 (MQ=255) aTCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGc < 6:328175/148‑1 (MQ=255) cACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGcata > 8:101590/1‑149 (MQ=255) aCCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGcata < 6:245999/148‑1 (MQ=255) cTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGc < 6:167367/94‑1 (MQ=255) cTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGc > 5:167367/1‑94 (MQ=255) tCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGca > 2:164979/1‑139 (MQ=255) tCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGca < 1:164979/139‑1 (MQ=255) cTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGCATACATACAGGTCCa < 6:175108/149‑1 (MQ=255) gggCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGCATACATACAGGTCCAg < 3:118982/147‑1 (MQ=255) gCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGCATACATACAGGTCCAGTTGc > 3:52493/1‑149 (MQ=255) gACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGCATACATACAGGTCCAGTTGCTg < 2:142659/149‑1 (MQ=255) gACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGCATACATACAGGTCCAGTTGCTg > 3:43888/1‑149 (MQ=255) gACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGCATACATACAGGTCCAGTTGCTg < 8:241269/149‑1 (MQ=255) gACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGCATACATACAGGTCCAGTTGCTg < 3:107596/149‑1 (MQ=255) | CCACGTATTGCAGGGCCTTGCGCACCAGACGCTTGGTACCCTCCTTCGACACCGGCTTGACGCCGATACCGCAGTCCTGGT‑CGAAGCGGATCTTGGTGACCCCCATTTCCTCCTTGAGAAACTTGATCACCTTGTTCGCCTCGGGCGACCCGGCCTTCCACTCGATGCCGGCATAG‑ATGT‑CTTCGGAGTTCTCGCGGAAGATCACCATGTCGACGTCGCCCGGCTTTTTCACCGGGCTTGGCACACCCTGGAACCACAGCACCGGCCGCAGGCATACATACAGGTCCAGTTGCTG > NC_002947/4521080‑4521374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |