| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,640,397 | A→G | 7.7% | intergenic (‑35/+23) | PP_4105 ← / ← gabP‑IV | hypothetical protein/gamma‑aminobutyrate permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,640,397 | 0 | A | G | 7.7% | 182.2 / 4.9 | 65 | intergenic (‑35/+23) | PP_4105/gabP‑IV | hypothetical protein/gamma‑aminobutyrate permease |
| Reads supporting (aligned to +/- strand): ref base A (28/31); new base G (2/3); total (31/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.07e-01 | |||||||||||
GCGTCCCAGTGGCTTTGCAGGTGCAGGCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGAACAGCATGTAGCC > NC_002947/4640253‑4640542 | gCGTCCCAGTGGCTTTGCAGGTGCAGGCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGcc < 3:66641/149‑1 (MQ=255) ccAGTGGCTTTGCAGGTGCAGGCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCa < 6:241548/148‑1 (MQ=255) cAGTGGCTTTGCAGGTGCAGGCCGCTGGGGTGGGAACAGCCGCAGCAATAGCAAGTACACACAGGGGCCGAGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTACTGTGCTTGTTGGAATGGGGGCGCGCAACGCACCCaa > 1:84224/1‑147 (MQ=255) cAGTGGCTTTGCAGGTGCAGGCCACTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGTTGCGCGCCCCCAtt < 3:102784/149‑1 (MQ=255) aGTGGCTTTGCAGGTGCAGGCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCAtt > 8:345275/1‑148 (MQ=255) gTGGCTTTGCAGGTGCAGGCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTaa < 8:15243/149‑1 (MQ=255) tGGGTTTGCAGGTTCTTGGCGGTGGGGTTGGAACAGCCGCATGCATTGCAAGTACCCTCAGGGGGCGCGATGGCTTGAATGGTAATTGTTTTATCAGTCATACGCTTCCTGTTCTTGTTTGAATGGGGGCGTTGCGCGCCCCCAttc < 2:116412/147‑2 (MQ=255) tGGCTTTGCAGGTGCAGGCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTaaa < 6:109141/149‑1 (MQ=255) tGGCTTTGCAGGTGCAGGCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGAATGAAGGGAAAGTGTGAGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGTTGCGCGCCCCCAttcca > 1:116412/1‑146 (MQ=255) ggCTTTGCAGGTGCAGGCCGCTGGGCTGCCAAAAGCCGCAGCAATATCAACTACCCTCAGGGCACGCGAGCGCGAGAAGGGAAACTCAGTGATCAGTCCTACTCTTCCTGTGCTTGATTGAATAGTCTCGCGCAAAGCCCCCATTaaat > 8:17104/1‑148 (MQ=255) cTTTGCAGGTGCAGGCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCa < 8:150545/149‑1 (MQ=255) gcaggtgcaggCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGAGATCAGACATACGATACCTGTGCATGTTGGAATGGGGGCGCACAACGCCCCCAATAAACCACaa > 8:237690/1‑148 (MQ=255) gtgcaggCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATc < 2:236666/149‑1 (MQ=255) gcaggCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGc > 4:203487/1‑126 (MQ=255) gcaggCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGc < 3:203487/126‑1 (MQ=255) caggCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAgg > 6:388484/1‑149 (MQ=255) gCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCt < 7:345275/149‑1 (MQ=255) cTGGGGTGGGAACAGCCGCAGCCATAGGAAGTACCCTCAGTGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCGTCCTGTGCTTGTTGGAATGGGCGCGAGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGGCTg < 3:212910/149‑1 (MQ=255) tGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTgg < 5:121745/149‑1 (MQ=255) gggAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAAc > 2:330420/1‑148 (MQ=255) ggAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGTTGCGCGCCCCCAttcc < 7:310898/119‑3 (MQ=255) ggAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGTTGCGCGCCCCCAttcc > 8:310898/1‑117 (MQ=255) aCAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTgg > 6:380940/1‑139 (MQ=255) aCAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTgg < 5:380940/139‑1 (MQ=255) aGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTc < 8:295602/149‑1 (MQ=255) ccGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCg > 2:253526/1‑148 (MQ=255) ccGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGc < 1:227819/149‑1 (MQ=255) ccGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGc < 4:211171/149‑1 (MQ=255) gCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCAc > 4:120131/1‑149 (MQ=255) aGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCAcgc > 4:96804/1‑149 (MQ=255) cAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGt > 5:226359/1‑149 (MQ=255) gTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATGAAAGCAGACACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAg > 5:109119/1‑149 (MQ=255) tACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGc < 7:17104/149‑1 (MQ=255) cTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGaaa < 2:108984/149‑1 (MQ=255) aGGGGCCGCGTGGGCTTGTAGTGAAAGTGTGTGTTGAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACTTCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAAc < 6:199614/147‑1 (MQ=255) aGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAAc < 5:266693/147‑1 (MQ=255) aGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAAc < 5:388484/147‑1 (MQ=255) aGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCa < 1:330420/149‑1 (MQ=255) gCCGCGAGGGCTTGAAGGCAAAGTGTGTGATCAGTCATACGCTTCCTCTGCTTGTTGGAATGGGGGCGCGCACCGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCTTCTTCGCACGCCGCTGGCTCAGCGAAACCAGCa > 6:273809/1‑148 (MQ=255) gcgAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAAt > 4:337804/1‑149 (MQ=255) cTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAAcgcg < 1:253526/149‑1 (MQ=255) cTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAAcgcg < 3:337804/149‑1 (MQ=255) aGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCAc > 4:83733/1‑149 (MQ=255) gggAAAGTGTGTGATCAGCCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCAcc > 2:201739/1‑149 (MQ=255) aaGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCgg > 2:2906/1‑149 (MQ=255) attcGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTc < 7:346653/146‑1 (MQ=255) aTACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTc > 5:274479/1‑149 (MQ=255) tACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCg > 6:303647/1‑149 (MQ=255) cGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTa < 1:2906/149‑1 (MQ=255) agCTTCCTGTGGTTGTTGGAATGTTTGAGCGCAACTCCCACATTAAAGCAGAAACATCAGGCCGTCTGTGCAAGCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTa < 2:84224/148‑1 (MQ=255) gCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAg > 4:12408/1‑149 (MQ=255) ccTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCg > 5:64808/1‑142 (MQ=255) ccTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGCTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCg < 6:64808/142‑1 (MQ=255) ttgttgGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATc > 7:268255/1‑149 (MQ=255) ttgGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCt < 6:274479/149‑1 (MQ=255) ggAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTg < 3:96804/148‑1 (MQ=255) gAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGaa < 3:83733/149‑1 (MQ=255) gAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGaa > 8:14484/1‑149 (MQ=255) gAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGaa > 2:280223/1‑149 (MQ=255) gAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGaa > 3:195558/1‑149 (MQ=255) gggCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGAACAGCAt > 8:326657/1‑149 (MQ=255) gcgcgcAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGAACAg > 7:198588/1‑144 (MQ=255) gcgcgcAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGAACAg < 8:198588/144‑1 (MQ=255) gcgcAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGAACAGCATGTAg < 1:201739/149‑1 (MQ=255) gcAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGAACAGCATGTAGcc > 2:71163/1‑149 (MQ=255) aCGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGAACAGCAt < 1:239501/140‑1 (MQ=255) aCGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGAACAGCAt > 2:239501/1‑140 (MQ=255) | GCGTCCCAGTGGCTTTGCAGGTGCAGGCCGCTGGGGTGGGAACAGCCGCAGCCATAGCAAGTACCCTCAGGGGCCGCGAGGGCTTGAAGGGAAAGTGTGTGATCAGTCATACGCTTCCTGTGCTTGTTGGAATGGGGGCGCGCAACGCCCCCATTAAAGCAGAAACATCAGGCCGTCTGGGCAACCATCTTCGCACGCCGCTGGGTCAGCGAAACCAGCAAAATGAACGCGGTCACCCCGGCAGTCATCAGCGTTTCGTAGCGATAGGCATCGCTGAACAGCATGTAGCC > NC_002947/4640253‑4640542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |