| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,725,042 | T→C | 5.7% | intergenic (+27/+41) | PP_5661 → / ← PP_4183 | putative lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,725,042 | 0 | T | C | 5.7% | 264.7 / 3.5 | 87 | intergenic (+27/+41) | PP_5661/PP_4183 | putative lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (42/40); new base C (3/2); total (45/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
CCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTA > NC_002947/4724897‑4725187 | ccgacgAGGAAAACGCCTAAGCTGACAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTc < 7:250887/149‑1 (MQ=255) gccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCgg > 5:299500/1‑149 (MQ=255) cgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCgg < 4:164255/147‑1 (MQ=255) cgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCgg > 3:164255/1‑147 (MQ=255) gAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGttttt < 3:344810/149‑1 (MQ=255) gAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAACCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGttttt > 4:231042/1‑149 (MQ=255) aaaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGttttttt > 4:58239/1‑149 (MQ=255) cGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGCCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTtgtg < 5:56682/149‑1 (MQ=255) gCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGc > 7:60190/1‑149 (MQ=255) gCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACt > 6:222143/1‑149 (MQ=255) aaaGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTc > 2:199446/1‑149 (MQ=255) gATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGAt < 2:102593/149‑1 (MQ=255) aGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAAt < 3:178327/149‑1 (MQ=255) ggCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGtt < 5:50015/120‑1 (MQ=255) ggCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGtt > 6:50015/1‑120 (MQ=255) gAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAACCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGttt < 3:231042/149‑1 (MQ=255) aGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCa < 6:299500/149‑1 (MQ=255) aaGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAaac > 4:5730/1‑148 (MQ=255) ggCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGAt > 8:292602/1‑126 (MQ=255) ggCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGAt < 7:292602/126‑1 (MQ=255) ggCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAaacaac > 7:223544/1‑149 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGa < 8:284849/122‑1 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGa > 7:284849/1‑122 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCAAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAAcc > 1:288367/1‑147 (MQ=255) gCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAg > 6:373426/1‑149 (MQ=255) gCCGAAGAAGACGCTCCGGCTACTCCGGCTCCTACTACACCGGCTGAACCTGCCAAGCTGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGa < 8:60190/148‑1 (MQ=255) ccGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACATAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGc > 4:363402/1‑149 (MQ=255) ccGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAg < 6:246445/148‑1 (MQ=255) ccGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGc > 7:214607/1‑149 (MQ=255) cGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCt > 5:248528/1‑149 (MQ=255) cGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCt > 6:9820/1‑149 (MQ=255) gaagaaGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCtt < 2:157361/149‑1 (MQ=255) aagaagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCttt < 6:248528/149‑1 (MQ=255) gCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTg > 4:205453/1‑149 (MQ=255) gCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCAATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTg > 8:183091/1‑149 (MQ=255) gCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCttcgac > 4:18836/1‑145 (MQ=255) tACTCCGGCTCCTACTCCACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCg > 5:203482/1‑148 (MQ=255) tACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGccagatcgt > 5:81542/1‑141 (MQ=255) tACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGc < 6:81542/140‑1 (MQ=255) cTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGa < 5:9820/147‑1 (MQ=255) tCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAg < 6:254169/126‑1 (MQ=255) tCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAg > 5:254169/1‑126 (MQ=255) cGGCTCCTACTTCACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGt < 6:203482/148‑1 (MQ=255) cGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGATTCAGATGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTa > 1:168002/1‑149 (MQ=255) gCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACATAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTaca < 3:363402/149‑1 (MQ=255) ctactaCACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAaacaac < 4:78754/114‑1 (MQ=255) ctactaCACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAaacaac > 3:78754/1‑114 (MQ=255) ctactaCACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACttt < 5:222143/149‑1 (MQ=255) ctactaCACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACttt < 5:373426/149‑1 (MQ=255) ctactaCACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACttt < 8:214607/149‑1 (MQ=255) tactacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtc > 1:159093/1‑149 (MQ=255) tacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggt > 1:59425/1‑149 (MQ=255) cacCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCa > 8:106263/1‑96 (MQ=255) cacCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCa < 7:106263/96‑1 (MQ=255) cacCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggtcg < 6:63004/149‑1 (MQ=255) cacCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggtcg < 3:58239/149‑1 (MQ=255) cacCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggtcg < 2:168002/149‑1 (MQ=255) cacCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggtc < 1:199446/148‑1 (MQ=255) acCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggtcgg > 3:59803/1‑149 (MQ=255) acCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggtcgg > 2:5905/1‑149 (MQ=255) ggCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGgtgt < 3:5730/149‑1 (MQ=255) ccTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACAcc < 3:142954/149‑1 (MQ=255) cTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCa > 2:209647/1‑149 (MQ=255) gCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCgg > 7:8793/1‑112 (MQ=255) gCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCgg < 8:8793/112‑1 (MQ=255) ccAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCAATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCAt < 7:183091/147‑1 (MQ=255) tAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAg > 8:216964/1‑148 (MQ=255) aaTTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAGt < 2:159093/148‑1 (MQ=255) aTTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAACCAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCTAGTa > 8:138132/1‑148 (MQ=255) ttGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACa < 5:134849/108‑1 (MQ=255) ttGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACa > 6:134849/1‑108 (MQ=255) tAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAGTACATCCg > 4:293906/1‑148 (MQ=255) gcaCAAAAAAACCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATc > 3:367722/3‑135 (MQ=255) gcaCAAAAAAACCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATc < 4:367722/133‑1 (MQ=255) aaaCAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAGTACATCCGAAt > 8:335444/1‑149 (MQ=255) aaCAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGACACACCATCACATCGAGTACATCCGAAt < 1:209647/149‑1 (MQ=255) aCAAAAAAACCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAGTACATCCGAATg > 8:319789/1‑148 (MQ=255) aaaaaaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGGAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGt < 5:281672/99‑1 (MQ=255) aaaaaaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGGAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGt > 6:281672/1‑99 (MQ=255) aaaaaaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGa > 4:48001/1‑133 (MQ=255) aaaaaaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGa < 3:48001/133‑1 (MQ=255) aaaaaaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAGTACATCCGAATGGa > 4:366680/1‑148 (MQ=255) aaaaaaCCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAGTACATCCGAATGGAAc > 6:29596/1‑149 (MQ=255) aaCCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAGTACATCCGAATGGAACtctc < 5:29596/149‑1 (MQ=255) cccGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAGTACATCCGAATGGAACTCTCGa > 6:20159/1‑149 (MQ=255) accGACGATGTGGGGTTTTTTTTTGTGTCGGATCTTTCGATTTATCTGTTCTGTGGGATACAACGGAGATTTACTTGGCGGGCTCCGAGAGTACACTTTCGGGCGGGGTGA‑ACACCATCACATCGAGTACATCCGAATGGAACTCTCGa < 3:18836/148‑1 (MQ=255) cgaTGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTa < 1:5905/149‑1 (MQ=255) | CCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGA‑ACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTA > NC_002947/4724897‑4725187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |