| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,747,082 | C→G | 6.4% | S227T (AGC→ACC) ‡ | etfB ← | electron transfer flavoprotein subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,747,082 | 0 | C | G | 6.4% | 237.1 / 6.7 | 78 | S227T (AGC→ACC) ‡ | etfB | electron transfer flavoprotein subunit beta |
| Reads supporting (aligned to +/- strand): ref base C (36/37); new base G (2/3); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.95e-01 | |||||||||||
GGCTGCAGCGACAGTGTTCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTGGCTCGTTCAGGCGCA > NC_002947/4746937‑4747229 | ggcTGCAGCGACAGTGTTCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCATCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGc < 3:158090/149‑1 (MQ=255) gcTGCAGCGACAGTGTTCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCg > 5:184363/1‑149 (MQ=255) gCAGCGACAGTGTTCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCggg > 1:182520/1‑148 (MQ=255) cAGCGACAGTGTTCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCggg > 8:285459/1‑147 (MQ=255) gCGACAGTGTTCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGc > 1:89285/1‑149 (MQ=255) gACAGTGTTCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCAGCGCGGGCatcaa < 6:382673/149‑5 (MQ=255) aCAGTGTTCAGGGTGGCCGGGGCTATGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCgg > 3:234572/1‑149 (MQ=255) aCAGTGTTCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCAGCGCGGGCatcaag < 7:71158/149‑6 (MQ=255) aCAGTGATCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCgg < 3:6462/149‑1 (MQ=255) gtTCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCa > 8:165728/1‑139 (MQ=255) gtTCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCa < 7:165728/139‑1 (MQ=255) ttCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTc < 4:103148/149‑1 (MQ=255) cAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCaa > 6:235798/1‑149 (MQ=255) tGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCtt > 1:301924/1‑148 (MQ=255) gCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCa < 8:88574/148‑1 (MQ=255) ccGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACg < 7:268377/149‑1 (MQ=255) cGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCttgt < 7:285459/147‑1 (MQ=255) cGGCCTGGTATTAAGCGACAACCAGGATAGTCATTTAGATTACATTCGATTCGTTCTTCAGCTTCTCGACCTGTTAGGCCACAGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTGCACGGGCTTGTTGGTGGAg > 8:214593/1‑149 (MQ=255) cGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTc < 1:224028/124‑1 (MQ=255) cGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTc > 2:224028/1‑124 (MQ=255) ccTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGTCCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGc > 7:200580/1‑148 (MQ=255) tCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAg > 2:325408/1‑149 (MQ=255) cGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAgg > 7:213536/1‑149 (MQ=255) gTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAgg < 1:325408/148‑1 (MQ=255) gTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAg < 2:182520/147‑1 (MQ=255) tATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAggg < 7:253605/148‑1 (MQ=255) tATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAggg > 8:253605/1‑148 (MQ=255) gCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAAcc < 6:9264/114‑1 (MQ=255) gCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAAcc > 5:9264/1‑114 (MQ=255) gACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGcc > 5:169630/1‑147 (MQ=255) aCAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAg > 3:270449/1‑149 (MQ=255) aCCAGGATTGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTGGGCCACCGATTTGACCTTGATTCCCGCGCTGAGGGCTGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGc < 3:270726/149‑1 (MQ=255) ggATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCt > 1:282945/1‑149 (MQ=255) gATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTg < 6:169630/149‑1 (MQ=255) gATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTg < 5:235798/149‑1 (MQ=255) tAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTgg < 8:200580/148‑1 (MQ=255) tAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGa < 8:327879/149‑1 (MQ=255) tCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCCCGCTGCGGGCCGCCGGGGCTTCACCCTTCACGGGCGTGTTGGTGGAGGCGAGGGAAACGCCCCGGGCGTCGGGAGt > 8:259876/1‑148 (MQ=255) aTTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTaa > 1:365671/1‑148 (MQ=255) tttAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACa < 5:304799/149‑1 (MQ=255) aGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGt > 1:344044/1‑131 (MQ=255) aGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGt < 2:344044/131‑1 (MQ=255) aCCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAg > 3:29191/1‑149 (MQ=255) cttcgcttcgTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCttgtt > 2:189058/1‑99 (MQ=255) cttcgcttcgTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCttgtt < 1:189058/99‑1 (MQ=255) cttcgcttcgTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCg > 6:282590/1‑149 (MQ=255) ttcgcttcgTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGa > 7:123676/1‑132 (MQ=255) ttcgcttcgTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGa < 8:123676/132‑1 (MQ=255) cgcttcgTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCgg < 4:258507/147‑1 (MQ=255) cgcttcgTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGc < 6:184363/148‑1 (MQ=255) gTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGcttcttc < 2:365671/148‑1 (MQ=255) cttgAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTg < 2:367108/148‑1 (MQ=255) cttcAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTg < 4:270449/148‑1 (MQ=255) aGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCt < 2:301924/148‑1 (MQ=255) gCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCa > 7:289273/1‑105 (MQ=255) gCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCa < 8:289273/105‑1 (MQ=255) ctcGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCatg < 5:282590/148‑1 (MQ=255) tcGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCatgat > 2:232135/1‑149 (MQ=255) cGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCatgatg > 1:75925/1‑149 (MQ=255) gACCTGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCatgat < 2:282945/147‑1 (MQ=255) ccAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACg > 2:127326/1‑65 (MQ=255) ccAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACg < 1:127326/65‑1 (MQ=255) gTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCgg > 1:207807/1‑148 (MQ=255) gttcgCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCgg > 2:90372/5‑147 (MQ=255) aCCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑cgc > 2:222616/1‑149 (MQ=255) aCCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑cgc < 8:213536/149‑1 (MQ=255) tttGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAg < 2:89285/148‑1 (MQ=255) aCCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTgg < 2:75925/149‑1 (MQ=255) aCCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGAAGCGA‑CGCGTAGCGTgg > 6:19828/1‑149 (MQ=255) gccggctGCCCGCTGCGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTGGc < 7:161907/143‑1 (MQ=255) ccTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTGGc < 1:90372/149‑1 (MQ=255) cggctGCCCGCAGCGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTggg > 8:161907/5‑146 (MQ=255) gATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTGGCTCGt > 2:165696/1‑149 (MQ=255) aTGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTGGCTCGt < 1:232135/148‑1 (MQ=255) tGCCCGCAGCGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTGGCTCGtt > 3:181299/1‑148 (MQ=255) gCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTGGCTCGtt > 2:197485/1‑147 (MQ=255) ccGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTGGCTCGTTCAgg < 4:29191/149‑1 (MQ=255) ccGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTGGCTCGTTCAgg > 3:150555/1‑149 (MQ=255) gcTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTGGCTCGTTCAGGCGCa < 4:150555/149‑1 (MQ=255) cTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGACCGCGTAGCGTGGCTCGTTCAGGCGCa < 1:197485/149‑1 (MQ=255) | GGCTGCAGCGACAGTGTTCAGGGTGGCCGGGGCTACGGCGCCGGCCTCGTATTCAGCGACAACCAGGATAGTCATTTAGATTACCTTCGCTTCGTTCTTCAGCTTCTCGACCAGTTCGGCCACCGATTTGACCTTGATGCCCGCGCTGCGGGCAGCCGGGGCTTCAACCTTCACGGTCTTGTTGGTGGAGGCGAGGGAAACGCCCAGTGCGTCTGGAGTAACAGTCTCCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCAGCGA‑CGCGTAGCGTGGCTCGTTCAGGCGCA > NC_002947/4746937‑4747229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |