| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,756,942 | A→G | 5.0% | H72R (CAC→CGC) | ompQ → | outer membrane pyoverdine efflux protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,756,942 | 0 | A | G | 5.0% | 238.1 / 2.1 | 80 | H72R (CAC→CGC) | ompQ | outer membrane pyoverdine efflux protein |
| Reads supporting (aligned to +/- strand): ref base A (40/35); new base G (2/2); total (42/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.77e-01 | |||||||||||
ACGCCGCCAACTATGGGCATAGCCCCGCCCGCCGGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAGGGCAACGATCAGCTCGATGC > NC_002947/4756794‑4757089 | aCGCCGACAACAATCGGCATAGCCCCGCCCGCCGGTAGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCa < 8:301821/149‑1 (MQ=255) cgccAACTATGGGCATAGCCCCGCCCGCCGGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGCGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGAc > 3:93033/1‑149 (MQ=255) aGCCCCGCCCGCCGGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGc > 5:222064/1‑144 (MQ=255) aGCCCCGCCCGCCGGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGc < 6:222064/144‑1 (MQ=255) cccgcccgCCGGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGccc > 2:128937/1‑149 (MQ=255) ccgcccgcCGGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCCACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCCGCCCg > 7:234466/1‑149 (MQ=255) ccgcccgcCGGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCTAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCGCGGCCAGGTCGTGGCTgttgtttc < 2:267489/149‑8 (MQ=255) cgcccgccGGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCgg < 1:128937/149‑1 (MQ=255) cgcccgccGGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCgg < 7:228786/149‑1 (MQ=255) cgcccgccGGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCgg < 7:234777/149‑1 (MQ=255) cgccgGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGcc < 8:134242/142‑1 (MQ=255) cgccgGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGcc > 7:134242/1‑142 (MQ=255) ggCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGccaggc < 6:71143/148‑1 (MQ=255) gCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGccaggccc > 8:82648/1‑149 (MQ=255) cAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGccaggccca > 5:216690/1‑149 (MQ=255) aaaGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGccaggcccag > 6:332314/1‑149 (MQ=255) gCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCgg > 3:125071/1‑131 (MQ=255) gCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCgg < 4:125071/131‑1 (MQ=255) cTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCgg > 8:154628/1‑149 (MQ=255) aCTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCggg > 5:187469/1‑148 (MQ=255) cTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCggg < 5:301938/147‑1 (MQ=255) cTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGc < 7:82648/148‑1 (MQ=255) cTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCa < 7:154628/149‑1 (MQ=255) cTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGCGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCggg < 4:93033/147‑1 (MQ=255) gAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTaa > 3:229309/1‑149 (MQ=255) gAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTaa < 8:32117/149‑1 (MQ=255) gAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTaa > 1:72812/1‑149 (MQ=255) aGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAAt > 8:309205/1‑149 (MQ=255) gCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATc < 7:309205/149‑1 (MQ=255) gCAAGGCACAGGCACTGCCGGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATc > 8:104510/1‑149 (MQ=255) gcacaggcacTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCgg > 8:109193/1‑149 (MQ=255) gcacaggcacTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCgg > 8:166737/1‑149 (MQ=255) gcacTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCCCGACCTGGCCGCGGCTGCAGCCCGGGTACGc < 4:121215/114‑1 (MQ=255) gcacTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGc > 3:121215/1‑114 (MQ=255) gcacTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGcgcc > 6:115563/1‑149 (MQ=255) gCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCgctgc > 4:234283/1‑149 (MQ=255) ccTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCgctgct > 1:199285/1‑149 (MQ=255) aTCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCtgctgc < 4:48048/147‑1 (MQ=255) aTCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCtgctgc < 3:234283/147‑1 (MQ=255) aTCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCt < 8:35646/149‑1 (MQ=255) aaCGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGa < 5:115563/148‑1 (MQ=255) aaCGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAg < 7:166737/149‑1 (MQ=255) aaCGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAg < 7:109193/149‑1 (MQ=255) aCGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAgg > 3:169641/1‑149 (MQ=255) gCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTg > 6:12856/1‑149 (MQ=255) ggAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCa < 1:287233/145‑1 (MQ=255) ggAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCa > 2:287233/1‑145 (MQ=255) gAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCg > 3:8133/1‑149 (MQ=255) aGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGc > 2:180120/1‑149 (MQ=255) gcccTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGcc < 5:332314/147‑1 (MQ=255) ttCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGa > 7:5420/1‑149 (MQ=255) cGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCtgctgc > 4:114281/1‑125 (MQ=255) cGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCtgctgc < 3:114281/125‑1 (MQ=255) ccAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGGAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGcc > 4:122494/1‑149 (MQ=255) cAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCa < 4:229309/149‑1 (MQ=255) aGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCGTGGATGCCAg > 8:91783/1‑149 (MQ=255) aGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAg < 6:187469/149‑1 (MQ=255) ccAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCAAGGCGCGGGCATAAAACCCCGCCGCGCCGCTGCTCCCTGGGGTGCAGTTCGGCCTGGATGCCAgccc > 5:247698/1‑148 (MQ=255) cAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAgccgt < 8:5420/149‑2 (MQ=255) gCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAgc < 7:104510/149‑1 (MQ=255) ttGACCAGTTGATCGAGATTGCCCGAAACAACAG‑CACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGcc > 7:344568/1‑149 (MQ=255) aCCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCct < 4:169641/148‑1 (MQ=255) ccAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCctgc < 6:216690/149‑1 (MQ=255) gTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGATGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCtgctgc > 2:340063/1‑149 (MQ=255) agaTTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAg < 4:8133/149‑1 (MQ=255) agaTTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAg > 7:118187/1‑149 (MQ=255) agaTTGCCCGAAACAACAG‑CACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAgg < 8:344568/149‑1 (MQ=255) cccGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCgcgg < 3:880/139‑1 (MQ=255) cccGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCgcgg > 4:880/1‑139 (MQ=255) aacaGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAg < 5:111545/135‑1 (MQ=255) aacaGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAg > 6:111545/1‑135 (MQ=255) aacaGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAGGGCAACGATCAGCt > 3:356446/1‑149 (MQ=255) aacaGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAGGGCAACGATCAGCt > 2:200352/1‑149 (MQ=255) gcaGCCGCGGCCAGGTCGTGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAg < 3:105283/133‑1 (MQ=255) gcaGCCGCGGCCAGGTCGTGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAg > 4:105283/2‑134 (MQ=255) gcaGCCGCGGCCAGGTCGTGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAGGGCAACGATCAGCTc > 7:102481/2‑149 (MQ=255) acaGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAGGGCAACGATCAGCTc < 3:175949/149‑1 (MQ=255) acaGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAGGGCAACGATCAGCTc > 4:175949/1‑149 (MQ=255) gCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAGGGCAACGATCAGCTCGAt < 2:72812/149‑1 (MQ=255) ccACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAgc > 6:126556/1‑113 (MQ=255) ccACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAgc < 5:126556/113‑1 (MQ=255) aCGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAGGGCAACGATCAGCTCGATGc > 4:288439/1‑148 (MQ=255) | ACGCCGCCAACTATGGGCATAGCCCCGCCCGCCGGTTGGCAAAGCCCTACTGCGAGCAAGGCACAGGCACTGCCTGATCAACGCTGGTGGAAGGCCTTCGCCAGCCCAGAGCTTGACCAGTTGATCGAGATTGCCCGAAACAACAGCCACGACCTGGCCGCGGCTGCAGCCCGGGTACGCCAGGCCCAGGCGCGGGCAGTAATCGCCGGCGCGCCGCTGCTGCCTGAGGTGCAGTTCGGCCTGGATGCCAGCCGCCAGCGCCTGCTGCGCGGCGAGGGCAACGATCAGCTCGATGC > NC_002947/4756794‑4757089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |