| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,767,818 | C→T | 10.7% | intergenic (+32/+37) | fpvA → / ← PP_4218 | TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,767,818 | 0 | C | T | 10.7% | 252.0 / 15.0 | 94 | intergenic (+32/+37) | fpvA/PP_4218 | TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein |
| Reads supporting (aligned to +/- strand): ref base C (40/43); new base T (6/4); total (47/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.27e-01 | |||||||||||
TTCGACAAGAAGTACTACCAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCG > NC_002947/4767679‑4767961 | ttCGACAAGAAGTACTACCAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGt > 7:73764/1‑149 (MQ=255)ttCGACAAGAAGTACTACCAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGt < 8:287844/149‑1 (MQ=255) cGACAAGTAGTACTACCAGGGCATTTCCATCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGtt < 7:153728/148‑1 (MQ=255) gACAAGAAGTACTACCAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGtttt < 1:18831/149‑1 (MQ=255) gACAAGAAGTACTACCAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGtttt < 3:130410/149‑1 (MQ=255) cAAGAAGTACTACCAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCTGGGTGCGGtttttt < 7:42435/149‑1 (MQ=255) agaagTACTACCAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCa > 3:168872/1‑149 (MQ=255) gaagTACTACCAGGGCATTTCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCTGGGTGCGGtttt < 1:352446/144‑1 (MQ=255) gaagTACTACCAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCTGGGTGCGGtttt > 2:352446/1‑144 (MQ=255) gTACTACCAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGa > 2:237652/1‑149 (MQ=255) actacCAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATg > 2:94575/1‑149 (MQ=255) ccAGGGCATTGCCAGCAACAACTCGTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGGTGAAAGCAAAAA‑ACCGCCCCCAGGTGCGGTTTTTTCATGGATGGCTg > 4:244021/1‑149 (MQ=255) ccAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGagccttt > 8:80787/1‑143 (MQ=255) gggCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGATCGCAAAAA‑ACCGGACCCAGGTGCGGTTTTTTCATGGATGCCTGaaa < 3:377524/149‑1 (MQ=255) cAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATgg > 5:79478/1‑130 (MQ=255) cAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATgg < 6:79478/130‑1 (MQ=255) aGCAACAACTCCTGGACCACGTACGACGTGTATGGTGACCAACGAAACTTCACCAACACCGCAAACTAAAGCTTATGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCACGCTGCGGTATTTTCATGGATGCCTTTAAGGATcccat > 4:92472/1‑146 (MQ=255) caacaaCTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGAAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACa > 8:302318/1‑149 (MQ=255) aacaacTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATGACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACa < 3:345975/148‑1 (MQ=255) aacaacTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAATACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACa < 1:94575/149‑1 (MQ=255) acaacTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTAc > 8:166249/1‑146 (MQ=255) acaacTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTAc < 7:166249/146‑1 (MQ=255) acaacTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGa < 8:73764/149‑1 (MQ=255) caacTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGAt > 8:195063/1‑149 (MQ=255) caacTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGAt > 8:189618/1‑149 (MQ=255) caacTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGAt < 1:343131/149‑1 (MQ=255) aacTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGAtg > 1:209208/1‑149 (MQ=255) acTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCAt > 2:203899/1‑120 (MQ=255) acTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCAt < 1:203899/120‑1 (MQ=255) cTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATTCCTGAAAGGCTCCGTTACAGAtgctgct > 8:240450/1‑149 (MQ=255) ggAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGAtgctgctg > 8:321587/1‑148 (MQ=255) gAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGAtgctgctg > 3:307522/1‑147 (MQ=255) cccGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTcc < 3:255626/128‑1 (MQ=255) cccGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTcc > 4:255626/1‑128 (MQ=255) cccGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTAc < 6:223994/133‑1 (MQ=255) cccGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTAc > 5:223994/1‑133 (MQ=255) tACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTc < 4:168872/149‑1 (MQ=255) acgacgTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGc < 7:11435/111‑1 (MQ=255) acgacgTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGc > 8:11435/1‑111 (MQ=255) gtgtATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGaccac < 3:244021/149‑1 (MQ=255) gtgtATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGaccac < 6:291434/149‑1 (MQ=255) ggTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCa < 8:55630/130‑1 (MQ=255) ggTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCa > 7:55630/1‑130 (MQ=255) gTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGc > 5:325831/1‑148 (MQ=255) aCCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAgg > 1:182131/1‑149 (MQ=255) aCCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGGGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAg < 1:263969/148‑1 (MQ=255) cccACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGc < 7:195063/149‑1 (MQ=255) cccACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGc < 7:189618/149‑1 (MQ=255) aCGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGac > 5:147765/1‑132 (MQ=255) aCGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGac < 6:147765/132‑1 (MQ=255) cGCAACTTCACCATCACCGCCAAGTACAGCGTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTc < 6:325831/149‑1 (MQ=255) ttCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGacc < 4:2440/126‑1 (MQ=255) ttCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGc < 1:237652/149‑1 (MQ=255) aCCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCg < 7:194160/144‑1 (MQ=255) aCCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCg > 8:194160/1‑144 (MQ=255) aTCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCctcctc > 3:119103/1‑149 (MQ=255) tCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTTCTGCAGTGCCTCGACCACCATCGACAGGCCTTCATCGGCCTCCTCg < 7:240450/149‑1 (MQ=255) aCCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGAt > 8:276554/1‑97 (MQ=255) aCCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGAt < 7:276554/97‑1 (MQ=255) aCCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCga < 3:92472/148‑1 (MQ=255) aCCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCga < 4:119103/148‑1 (MQ=255) cGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCgatga < 7:321587/149‑1 (MQ=255) ccAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAg < 8:164574/124‑1 (MQ=255) ccAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAg > 7:164574/1‑124 (MQ=255) aGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGaa < 7:302318/149‑1 (MQ=255) tACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAAcc < 2:182131/149‑1 (MQ=255) tACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAAcc > 6:200841/1‑149 (MQ=255) tACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAAcc > 6:87211/1‑149 (MQ=255) aGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGATCCCa > 6:166626/1‑148 (MQ=255) cTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACg < 2:209208/147‑1 (MQ=255) gCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAg < 4:307522/148‑1 (MQ=255) ccTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAgg > 1:293035/1‑60 (MQ=255) ccTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAgg < 2:293035/60‑1 (MQ=255) tGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCAt > 3:243997/1‑149 (MQ=255) aaCGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCAt > 2:294806/1‑141 (MQ=255) aaCGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCAt < 1:294806/141‑1 (MQ=255) atgaaaaa‑aCCGCACCTGGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTcc > 7:131966/4‑149 (MQ=255) gaaaaa‑aCCGCACCTGGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCg > 1:108923/2‑149 (MQ=255) gaaaaa‑aCCGCACCTGGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCg > 7:144193/2‑149 (MQ=255) aaaaa‑aCCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCg > 7:315391/1‑99 (MQ=255) aaaaa‑aCCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCg < 8:315391/99‑1 (MQ=255) aaaaa‑aCCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGc < 5:353564/101‑1 (MQ=255) aaaaa‑aCCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGc > 6:353564/1‑101 (MQ=255) aaaa‑aCCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATg > 8:113052/1‑128 (MQ=255) aaaa‑aCCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATg < 7:113052/128‑1 (MQ=255) aaa‑aCCGCACCTGGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGa < 8:131966/149‑1 (MQ=255) aaa‑aCCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGa > 4:5816/1‑149 (MQ=255) aaa‑aCCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGa > 2:39179/1‑149 (MQ=255) aa‑aCCGCACCTGGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGaa > 6:283668/1‑128 (MQ=255) aa‑aCCGCACCTGGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGaa < 5:283668/128‑1 (MQ=255) a‑aCCGCACCTGGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGACTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGAt > 5:227339/1‑148 (MQ=255) cGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGt < 1:305224/62‑1 (MQ=255) cGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGt > 2:305224/1‑62 (MQ=255) gCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCg > 4:69150/1‑149 (MQ=255) ccAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCg < 6:304156/63‑1 (MQ=255) ccAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCg > 5:304156/1‑63 (MQ=255) | TTCGACAAGAAGTACTACCAGGGCATTGCCAGCAACAACTCCTGGAGCCCGTACGACGTGTATGGTGACCCACGCAACTTCACCATCACCGCCAAGTACAGCTTCTGATCGCCTGACGTTGAACGCAAAAA‑ACCGCACCCAGGTGCGGTTTTTTCATGGATGCCTGAAAGGCTCCCTTACAGATGCTGCTGCAGTGCCTCGACCACCATCGCCAGGCCTTCATCGGCCTCCTCGATGATCGAACCCATACGCATGAAGTCATGGGTCACTCCCGGGATCACCG > NC_002947/4767679‑4767961 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |