| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,796,619 | A→G | 26.6% | intergenic (‑177/+41) | pvdH ← / ← PP_4224 | diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,796,619 | 0 | A | G | 26.6% | 125.4 / 50.7 | 79 | intergenic (‑177/+41) | pvdH/PP_4224 | diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase |
| Reads supporting (aligned to +/- strand): ref base A (26/32); new base G (7/14); total (33/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.99e-01 | |||||||||||
GAAGCGGTGGACATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATCGCCTGCACAATCG > NC_002947/4796471‑4796766 | gAAGCGGTGGACATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGGTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGa < 4:48482/149‑1 (MQ=255) aaGCGGTGGACATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAg > 1:87684/1‑149 (MQ=255) aGCGGTGGACATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGc > 3:91202/1‑149 (MQ=255) cGGTGGACATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCgg < 4:284228/149‑1 (MQ=39) cGGTGGACATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCgg < 6:270814/149‑1 (MQ=255) cGGTGGACATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCgg < 4:284114/149‑1 (MQ=255) ggTGGACATGGGTAAATCCTCGCGATCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCggg < 3:296583/149‑1 (MQ=255) gTGGACATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGt < 1:150852/149‑1 (MQ=255) gACATGGGTAAATCCTCGCTAGCAAGCGGATGTGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCa < 8:341300/149‑1 (MQ=255) aCATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTAc < 4:204565/149‑1 (MQ=38) cATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGACACGCTTGAGTGGGCGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCAcc < 7:242039/149‑1 (MQ=255) cATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTAc < 8:319081/148‑1 (MQ=38) aTGGGTAAATCCTCGCGAGCAAGCGGATTGGCGGTTATCGCTTTGGAAACGCTTGATTTGGGGGATGATTTAGCGGTTGTTTCGCGATTTTATTTTCTGTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTAcc < 1:98996/149‑1 (MQ=25) aTGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCAccc < 2:370070/149‑1 (MQ=255) aTGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGCCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTAccc < 3:323652/149‑1 (MQ=37) ggTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCcgc > 6:388270/1‑148 (MQ=255) ggTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGCCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTACCcgcg < 3:107384/149‑1 (MQ=37) aTCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCAccc > 4:5948/1‑141 (MQ=255) aTCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCAccc < 3:5948/141‑1 (MQ=255) cTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCGCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGc < 7:350520/148‑1 (MQ=255) gCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAg > 5:6366/1‑149 (MQ=255) gCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAg > 8:330769/1‑149 (MQ=255) cAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTACCcg > 8:209156/1‑131 (MQ=37) cAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTACCcg < 7:209156/131‑1 (MQ=37) gCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTACCCGCGaa < 3:16770/132‑1 (MQ=25) gCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTACCCGCGaa > 4:16770/1‑132 (MQ=25) gCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGCCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTACCcgc < 5:28449/129‑1 (MQ=25) gCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGCCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTACCcgc > 6:28449/1‑129 (MQ=25) cGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGc > 2:207419/1‑108 (MQ=255) cGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGc < 1:207419/108‑1 (MQ=255) gCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCa < 2:87684/148‑1 (MQ=255) tGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGa < 2:285162/147‑1 (MQ=255) gAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGAcgcg > 7:25984/1‑149 (MQ=255) gCTTGAGTGGGGGGAGGATTTAGGGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTACGCGGGTAAACCCGCCCGTTGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGt < 3:190282/149‑1 (MQ=255) gAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAACACATCAATGCCCAGGACGCGCCGGTAc < 1:209016/148‑1 (MQ=255) tGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGc < 4:91202/148‑1 (MQ=255) ggaTTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAAcc < 5:388270/149‑1 (MQ=255) tttAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGc < 7:330769/149‑1 (MQ=255) gCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTTAACCCGCCCGGAGGAGCGGGGTGACCCGCGGAGAGGCCAGCCCAGGCGGTTA‑ACATCAAAGCCCCGGGCGCGCCGGGTCCGGGCACAAAACCCCCAAGc > 4:28828/1‑149 (MQ=25) gCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGGTTTAc < 2:346759/75‑1 (MQ=17) gCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGGGTTTAc > 1:346759/1‑75 (MQ=17) gttgttACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGt > 8:107340/1‑149 (MQ=255) cgcgATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTAc < 8:25984/148‑1 (MQ=255) gcgATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGcac < 3:321241/82‑1 (MQ=255) gATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTGACCCGGGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCt > 1:348328/1‑149 (MQ=255) tttt‑tGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCaaa < 6:186967/148‑1 (MQ=255) tGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTc > 5:329155/1‑129 (MQ=255) tGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTc < 6:329155/129‑1 (MQ=255) gTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAg > 6:300187/1‑149 (MQ=255) gTCTGGGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCa < 2:21510/148‑1 (MQ=255) gCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCa < 3:146328/138‑1 (MQ=255) gCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCgg < 7:181591/147‑1 (MQ=255) gCCTCTTCGCCGGTAAACCCGCCCCTAGGACCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAAAGCCCACGACCCCCCGGTACCTCCAAAAAAACCCCCAAACCGTCAATACGGCTGTCAAAGCGCa > 4:146328/1‑138 (MQ=25) ctctTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAg < 7:97011/132‑1 (MQ=25) ctctTCGCGGGTGAACCCGCTCCTACGGGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAg > 8:97011/1‑132 (MQ=25) ctctTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTAc > 8:207740/1‑142 (MQ=255) ctctTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTAc < 7:207740/142‑1 (MQ=255) tctTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCacac > 5:39868/1‑149 (MQ=255) tCGCGGGTGAACCCGCTCCTACGGGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGc > 5:92023/1‑149 (MQ=37) tCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGc > 7:23326/1‑149 (MQ=255) cgcgGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGcaacaa < 8:358114/96‑1 (MQ=255) cgcgGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGcaacaa > 7:358114/1‑96 (MQ=255) cgGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTg > 4:328459/1‑148 (MQ=255) cgGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGAACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTg > 6:66567/1‑148 (MQ=255) gggTGAACCCGCTCCTACGGGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCa > 1:364513/1‑149 (MQ=38) ggTGAACCCGCTCCTACGGGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGTAc < 1:141039/149‑1 (MQ=37) gtgaaCCCGCTCCTACGGGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACg < 6:92023/146‑1 (MQ=38) gTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCAc > 6:25510/1‑148 (MQ=255) gTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACg < 3:28828/149‑1 (MQ=255) aCCCGCTCCTACGGGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATc < 2:364513/148‑1 (MQ=255) aCCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATCg > 6:124543/1‑149 (MQ=255) ccgTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATCGCCTGca < 3:328459/149‑1 (MQ=255) ccgTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATCGCCTGca < 2:348328/149‑1 (MQ=255) ccgTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGAACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATCGCCTGca < 5:66567/149‑1 (MQ=255) ggAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATCGCCTGCACAATc < 7:107340/149‑1 (MQ=255) gAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCCCGATCGCCTGCACAATCg > 4:6233/1‑149 (MQ=255) gAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATCGc > 5:174650/1‑138 (MQ=255) gAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATCGc < 6:174650/138‑1 (MQ=255) gAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATCGCCTGCACAATCg > 2:8421/1‑149 (MQ=255) gAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATCGCCTGCACAATCg > 6:336362/1‑149 (MQ=255) | GAAGCGGTGGACATGGGTAAATCCTCGCGAGCAAGCGGATGGGCGGTTATCGCTTTGGAAACGCTTGAGTGGGGGGAGGATTTAGCGGTTGTTACGCGATTTTATTTT‑TGTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCGATAA‑ACATCAATGCCCAGGACGCGCCGGTACCTGCAACAAAACCCGCAAGCCGTCACTACGGCTGTCAAAGCGCAGGCTACCGGCACACCGCTGCACGATCGCCTGCACAATCG > NC_002947/4796471‑4796766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |