| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,864,671 | T→A | 6.8% | Q401L (CAG→CTG) | smc ← | chromosome partition protein Smc |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,864,671 | 0 | T | A | 6.8% | 214.9 / 5.0 | 74 | Q401L (CAG→CTG) | smc | chromosome partition protein Smc |
| Reads supporting (aligned to +/- strand): ref base T (31/38); new base A (3/2); total (34/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.30e-01 | |||||||||||
TCGCTGCTGGCCAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCATTTCCTGCTCGGGTTCGAG > NC_002947/4864527‑4864819 | tCGCTGCTGGCCAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGCTTTCCAGCTGCTGCAGGCGCGCCTGCTGCa < 1:31599/148‑1 (MQ=255) tgctgGCCAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCg > 3:218612/1‑149 (MQ=255) gctgGCCAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCgg > 8:18621/1‑149 (MQ=255) gCCAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCt < 4:302607/148‑1 (MQ=255) gCCAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTg > 6:236500/1‑149 (MQ=255) ccAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTgg < 7:135857/149‑1 (MQ=255) ccAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCAGCAGGCGCGCCTGCTGCACTTCGGCCTgg > 2:205251/1‑149 (MQ=255) tGCTCGGCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGgcggcg > 3:57374/1‑149 (MQ=255) cTCGGCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTCCGGCCTGGCGGcgcg < 3:332185/149‑1 (MQ=255) ggCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGtt < 5:236500/149‑1 (MQ=255) ggCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGtt > 2:2907/1‑149 (MQ=255) gCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTGAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTc < 2:370184/149‑1 (MQ=255) cAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGTGGCGCGGTTcgg < 5:358309/149‑1 (MQ=255) aGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTcggc < 8:174882/149‑1 (MQ=255) gTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGCCCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTgg > 4:35688/1‑134 (MQ=255) gTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGCCCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTgg < 3:35688/134‑1 (MQ=255) gAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGc < 7:18621/149‑1 (MQ=255) gcggcATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGtt < 5:345727/149‑1 (MQ=255) cATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAg < 1:106333/149‑1 (MQ=255) cATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAg < 7:306272/149‑1 (MQ=255) cATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAg < 1:2907/149‑1 (MQ=255) cTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGt < 1:309576/140‑1 (MQ=255) cTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGt > 2:309576/1‑140 (MQ=255) cGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTccc < 4:57374/149‑1 (MQ=255) cGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTc < 4:106346/147‑1 (MQ=255) gggTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCAGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCa < 1:205251/149‑1 (MQ=255) cTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCCGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGGTCGGCGGAGCGGCTGTTGCAGCTGTCCCACTGTTc > 7:106114/1‑149 (MQ=255) tGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCgg < 4:290476/125‑1 (MQ=255) gCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCt > 2:64266/1‑149 (MQ=255) cccAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTcc < 2:314292/147‑1 (MQ=255) cccAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCt < 4:218612/148‑1 (MQ=255) ccAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGtt > 2:36364/1‑144 (MQ=255) ccAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGtt < 1:36364/144‑1 (MQ=255) ccAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGc > 1:206762/1‑149 (MQ=255) ccAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGc > 5:234017/1‑149 (MQ=255) cAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTc > 5:152457/1‑93 (MQ=255) cAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTc < 6:152457/93‑1 (MQ=255) cTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGt > 5:374474/1‑149 (MQ=255) cTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGt > 4:227593/1‑149 (MQ=255) gcgcTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGGTTCCAGCTGCTGCTGGAGCGCCTGCTGCACTTCTGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCATCCGTGc < 7:243444/148‑1 (MQ=255) gACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCt > 6:144758/1‑149 (MQ=255) gACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCCGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTg > 5:280527/1‑138 (MQ=255) gACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCCGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTg < 6:280527/138‑1 (MQ=255) aCCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTc < 3:227593/149‑1 (MQ=255) tcgcTGGCGCTCGGCCTGGAGCTCAAGGCTGGGTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCctct < 8:106114/147‑1 (MQ=255) gcgcTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGt > 5:196767/1‑107 (MQ=255) gcgcTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGt < 6:196767/107‑1 (MQ=255) cTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTc > 3:119132/1‑147 (MQ=255) gcTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGcgcg > 8:21218/1‑149 (MQ=255) gcTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGcgcg > 3:90718/1‑149 (MQ=255) cTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCgg < 7:123941/149‑1 (MQ=255) gCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGc < 2:206762/149‑1 (MQ=255) ccTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCgg < 1:225295/144‑1 (MQ=255) ccTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCgg > 2:225295/1‑144 (MQ=255) gcTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCCGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTcc > 6:14884/1‑149 (MQ=255) aaGGCT‑GTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCgg > 4:146145/1‑148 (MQ=255) ggCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAg < 7:206225/135‑1 (MQ=255) ggCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAg > 8:206225/1‑135 (MQ=255) tGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCa > 8:123020/1‑102 (MQ=255) tttCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCagcagc > 7:270367/1‑148 (MQ=255) tgcagcAGGCGCGCCTGCAGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGGATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTc > 1:181138/1‑128 (MQ=255) tgcagcAGGCGCGCCTGCAGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGGATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTc < 2:181138/128‑1 (MQ=255) tgcagcAGGCGCGCCTGCAGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGc > 4:159546/1‑125 (MQ=255) tgcagcAGGCGCGCCTGCAGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGc < 3:159546/125‑1 (MQ=255) ctgcAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCAtt < 6:234017/148‑1 (MQ=255) ctgcAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCAtt < 4:119132/148‑1 (MQ=255) tgcAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCATTTc > 5:293769/1‑149 (MQ=255) tgcAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCATTTc < 4:90718/149‑1 (MQ=255) agcAGGCGCGCCTGCAGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCATTTc > 8:72805/2‑149 (MQ=255) gcAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAg > 2:91116/1‑139 (MQ=255) gcAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAg < 1:91116/139‑1 (MQ=255) aGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCATTTCCTg > 7:248729/1‑149 (MQ=255) gcCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCATTTCCTGCTCggg < 1:64266/149‑1 (MQ=255) ccTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCATTTCCTGCTCGGGt < 3:120655/149‑1 (MQ=255) gctgcACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCATTTCCTGCTCGGGTTc > 2:195480/1‑148 (MQ=255) tgcACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTc > 3:86743/1‑113 (MQ=255) tgcACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTc < 4:86743/113‑1 (MQ=255) tgcACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCATTTCCTGCTCGGGTTCGAg > 6:390830/1‑149 (MQ=255) | TCGCTGCTGGCCAGTTGCTCGGCCAGTTCGAGCATGGCGGCATCCTGCGGGTCGCTGCCCAGTTGCTCGCGCTCCTCGACCAACTTGCGCTGGCGCTCGGCCTGGCGCTCAAGGCTGGTTTCCAGCTGCTGCAGGCGCGCCTGCTGCACTTCGGCCTGGCGGCGCGGTTCGGCGGAGCGGCTGTTGAAGCTGTCCCACTGTTCCTGCCAGCCGTGCATGCCCAGCTCGGCCTCTTCAAGCGCGGCAGCGGCTTCCTCGGCAGCAGCCAGGGTCATTTCCTGCTCGGGTTCGAG > NC_002947/4864527‑4864819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |