Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,891,873 | G→A | 6.9% | V345V (GTG→GTA) | ttuD → | hydroxypyruvate reductase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,891,873 | 0 | G | A | 6.9% | 263.0 / 6.0 | 87 | V345V (GTG→GTA) | ttuD | hydroxypyruvate reductase |
Reads supporting (aligned to +/- strand): ref base G (37/44); new base A (2/4); total (39/48) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.87e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.06e-01 |
TCGTTCAACACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACGGCTACGGCTAC > NC_002947/4891725‑4892017 | tCGTTCAACACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCgtg > 3:35829/1‑149 (MQ=255) gTTCAACACGGCCAGCCGCTCAACGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCCCCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCgtgt < 4:235500/148‑1 (MQ=255) gTTCAACACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTa < 1:63009/149‑1 (MQ=255) aaCACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCAGGGCGTACACGcc > 5:391110/1‑149 (MQ=255) acGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTg < 6:24621/149‑1 (MQ=255) acGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTg < 3:52458/149‑1 (MQ=255) acGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTg < 7:329454/149‑1 (MQ=255) acGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCAGGGCGTACACGcccgg < 6:391110/149‑3 (MQ=255) ggCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCAGGGCGTACACGcccggca < 8:212191/149‑5 (MQ=255) gCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCGCCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTACACGcccggcag < 6:335378/149‑6 (MQ=255) ccAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGTCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCg < 1:275580/149‑1 (MQ=255) ccAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCg < 7:16187/149‑1 (MQ=255) gCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTg < 5:14633/149‑1 (MQ=255) ccGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTAc > 8:197296/1‑135 (MQ=255) ccGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTAc < 7:197296/135‑1 (MQ=255) ccGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGa > 3:152583/1‑149 (MQ=255) gCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGaca > 3:91511/1‑149 (MQ=255) gCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGaca < 4:315351/149‑1 (MQ=255) gCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGaca < 8:301693/149‑1 (MQ=255) tCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACAcc > 7:302486/1‑149 (MQ=255) gcgcCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACgg < 4:91511/149‑1 (MQ=255) cccTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCAt > 1:299709/1‑149 (MQ=255) ccTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATc > 4:225147/1‑149 (MQ=255) cTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCg > 4:252804/1‑149 (MQ=255) gTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATgg < 4:152583/149‑1 (MQ=255) gATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCt > 2:365189/1‑149 (MQ=255) tCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCgtgt > 2:353972/1‑106 (MQ=255) tCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCgtgt < 1:353972/106‑1 (MQ=255) tCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGgaag < 4:35829/148‑1 (MQ=255) gTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGaaa > 4:151577/1‑147 (MQ=255) gTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGaaa < 3:151577/147‑1 (MQ=255) cGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCg < 4:16090/149‑1 (MQ=255) gAAACCACCGTGACCGTGTGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCgg < 2:1480/149‑1 (MQ=255) gAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCgg > 3:70478/1‑149 (MQ=255) accaccGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGc > 4:374897/1‑149 (MQ=255) ccaccGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGT‑ACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCt > 8:287089/1‑149 (MQ=255) accgtgaccgtgCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCtt < 4:210280/149‑1 (MQ=255) ccgtgaccgtgCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCtt > 5:380227/1‑148 (MQ=255) cgcgGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCgg < 4:70478/148‑1 (MQ=255) ggCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAg > 7:186480/1‑149 (MQ=255) gCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGc > 1:200896/1‑148 (MQ=255) gCCGTGGCGGGCGTAACGCCGAGTTCCTGCTAAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGc > 6:5146/1‑148 (MQ=255) ccGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCa < 3:225147/149‑1 (MQ=255) cgggcgTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCg < 6:380227/149‑1 (MQ=255) gggcgTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGa < 2:299709/149‑1 (MQ=255) gTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAgc > 4:112750/1‑140 (MQ=255) gTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAgc < 3:112750/140‑1 (MQ=255) gTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGcc < 8:302486/149‑1 (MQ=255) aaCGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCtt > 8:223680/1‑149 (MQ=255) aCGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTg < 2:26843/149‑1 (MQ=255) cGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTgg > 8:205632/1‑149 (MQ=255) gCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTggg > 3:310207/1‑149 (MQ=255) gCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTggg > 1:337105/1‑149 (MQ=255) ccGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGc < 7:287089/149‑1 (MQ=255) ccGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGc < 1:365189/149‑1 (MQ=255) ttCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTc < 4:310207/149‑1 (MQ=255) ccTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCgg > 3:158399/1‑149 (MQ=255) cTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCgg < 5:5146/148‑1 (MQ=255) atGCTCAGCCTCACCGAAAGACTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCCCTGACACACACGGCAACGATCGCTCGGAAGAAAACGCCGCTCCCTTCAAGACCCCAGCCAGCTAAGCAAGAGCCGAAGCCTTGCCCCTGTCgcc > 8:113475/2‑147 (MQ=255) cTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAg < 3:374897/149‑1 (MQ=255) tCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGc > 5:135838/1‑149 (MQ=255) atccTCACCGAAACCCTTAAAGGCATGACTGGCGTGTACGCCCTGGCCTGTTACACCGACTGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGcg < 6:298814/146‑1 (MQ=255) ccTCACCGAAAGCCTGAAAGGCCTGTCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGcgac > 4:321964/1‑148 (MQ=255) ccTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGcgac > 7:85910/1‑148 (MQ=255) tCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAg > 4:78761/1‑149 (MQ=255) tCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAg > 4:191466/1‑149 (MQ=255) tCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAg > 5:85245/1‑149 (MQ=255) ccGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTg < 1:347070/149‑1 (MQ=255) ccGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTg < 7:205632/149‑1 (MQ=255) cGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTggg > 2:127306/1‑126 (MQ=255) cGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTggg < 1:127306/126‑1 (MQ=255) cGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGcgacga > 4:298984/1‑144 (MQ=255) cGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGcgacga < 3:298984/144‑1 (MQ=255) gAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGa < 2:200896/149‑1 (MQ=255) aaaGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGac < 3:252804/149‑1 (MQ=255) aGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGacaa < 2:337105/149‑1 (MQ=255) cTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGacaacaa > 6:189164/1‑149 (MQ=255) tGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAg > 4:328979/1‑94 (MQ=255) tGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAg < 3:328979/94‑1 (MQ=255) tGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTg > 7:302035/1‑140 (MQ=255) tGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTg < 8:302035/140‑1 (MQ=255) aaaGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTc > 3:104190/1‑122 (MQ=255) aaaGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTc < 4:104190/122‑1 (MQ=255) ccggccagggCGTACACGCCC‑GGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAacggct < 3:237013/142‑1 (MQ=255) ccggccagggCGTACACGCCC‑GGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAacggc > 4:237013/8‑148 (MQ=255) cTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGc > 6:340932/1‑119 (MQ=255) cTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGc < 5:340932/119‑1 (MQ=255) cTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAacggcta > 2:96849/1‑149 (MQ=255) ccGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAacggctacgg < 4:158399/149‑1 (MQ=255) ggCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAAcggctacggcta < 3:191466/149‑1 (MQ=255) gCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACggctacggctac < 5:189164/149‑1 (MQ=255) | TCGTTCAACACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACGGCTACGGCTAC > NC_002947/4891725‑4892017 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |