| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,909,949 | C→G | 9.9% | intergenic (+342/+137) | PP_4318 → / ← PP_4319 | transposase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,909,949 | 0 | C | G | 9.9% | 174.8 / 10.6 | 70 | intergenic (+342/+137) | PP_4318/PP_4319 | transposase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (30/30); new base G (5/2); total (38/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.81e-01 | |||||||||||
AACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATACAGAAACAGTGTTACTGTGC > NC_002947/4909807‑4910094 | aaCGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATACATGGGGCCTCAGCGCTTGACGGGCATCCATGcc > 7:78226/1‑149 (MQ=17) cgACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGt > 8:150897/1‑148 (MQ=32) cgACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTc < 2:302422/149‑1 (MQ=32) aCAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATGGATGCCCGTCaa < 7:14762/149‑2 (MQ=17) cAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTACGGGGT‑TACCTCGCTACGCTCTAGCTACCGGCAGTACGCGCTGCAGGCCCCATCCATGCGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCaac > 5:362721/1‑147 (MQ=11) aaaaaGTAACCAAAAAACGCTGGATCCTATCATCCGGCCCCTGCGCTCCGCTCCGGGGT‑TACCTCGCTACGGAGATTCACCCCGGAGTACGCGCTGCACGCCCCAGCCATGGGGCCTCAGCGCAAGCCGGGCCAACATGCCCGTCACCt > 5:201436/1‑149 (MQ=11) aaaaGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTc > 1:32997/1‑149 (MQ=32) aGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCt < 2:32997/149‑1 (MQ=32) aaCCAAAAAACGCTGGCTACTATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATCGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCg > 2:77988/1‑149 (MQ=21) cAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCaa < 3:6257/149‑1 (MQ=34) aaaaCGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGcc > 6:193025/1‑149 (MQ=34) tATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCaa < 3:151756/132‑1 (MQ=33) tATCATCCGGCCCCTGCGCTAAGCTCCGGGGT‑TACCTCGCTACGGTCTTGCTACCGGGAGTACTCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCAGTCACCTCCATACGCaa > 4:151756/1‑132 (MQ=11) atcatcCGGCCCCTGCGCTACGCTCCGGGGTCTCCCTCGCTACGGTCTTGATCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCtt > 1:232956/1‑149 (MQ=255) atcatcCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTc > 8:68006/1‑149 (MQ=35) atcatcCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTc > 8:267705/1‑149 (MQ=35) tcatcCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCtt < 7:150897/147‑1 (MQ=35) atcCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTg < 6:189366/148‑1 (MQ=37) tcCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGaa < 5:193025/149‑1 (MQ=37) ggCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTc < 2:23057/149‑1 (MQ=37) cccTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTc < 7:143358/146‑1 (MQ=37) cccTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTAAGCGCTGCAGGCCCCCTCCAAGGGGCCTCAGCGCTTGACGGGCATCCCTGCCCCTCACCACCCGTCGCAAGCCCTGCGCGCCGCCATCGGAAGTc > 8:143358/1‑146 (MQ=11) cTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCg < 2:206728/131‑1 (MQ=34) cTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCg > 1:206728/1‑131 (MQ=34) cTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAAt < 7:267705/149‑1 (MQ=37) cgcTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCt < 7:68006/148‑1 (MQ=37) gcTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGc < 3:224043/149‑1 (MQ=37) tACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGt > 3:193316/1‑149 (MQ=37) tACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGt > 8:184672/1‑149 (MQ=17) tACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGCGGCCTCAGCGCTTGACGGGCATACATGCCCGTCACCTCCCTTCGCAAGCCATgcgcacc > 6:305760/1‑122 (MQ=255) tACGCTCCGGGGT‑TCCCTCGCTAAGGTCTTGCTACCGGGAGTACGCGCTGCAGGCCCCCTCCATGGGGCCTCAGCGCTTGACGGGCATACATGGCCGTGACCTCCCTTCGCAAGCCCTGCGCTCGGGCTTCTGAAGTAGCAATATGCGt > 5:33245/1‑149 (MQ=11) cGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTg > 7:102148/1‑148 (MQ=37) ggggT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGaa < 1:217949/149‑1 (MQ=37) cccTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTa < 2:60715/146‑1 (MQ=37) cccTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTa > 1:60715/1‑146 (MQ=37) ccTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGc > 4:112972/1‑137 (MQ=37) ccTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGc < 3:112972/137‑1 (MQ=37) cTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCAAGGGGCCTCAGCGCTTGACAGGCATCCATGCCCGTCACCTCCCATCCCAAGCCCTGAGCTCCGCCTTCTGAAGTCGCAAACTACGTCCCCTGAACAACcgca > 6:330996/1‑148 (MQ=14) cTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCt < 6:33245/149‑1 (MQ=255) aCGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTAGCAATCTGCGTCGCCTGAACTACCGCGCGCTTa > 6:60379/1‑149 (MQ=255) cGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCtt < 8:102148/147‑1 (MQ=39) cTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCaaa < 7:184672/148‑1 (MQ=25) cccGGGAGTACGCGCTGCAGGCCCCTTCCTTGGGGCCTCAGCGCTTGTCGGTCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGGTCGGCCTTCTGAAGTCGCAATCTGCGTGGCCTGAACTACCGCGCGCTTACAAGGAAaagg < 6:201436/149‑2 (MQ=14) ggAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaa < 8:112139/149‑1 (MQ=255) cgcgCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGaa < 1:197888/114‑1 (MQ=35) cgcgCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGaa > 2:197888/1‑114 (MQ=35) cgcTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaag > 6:28294/1‑148 (MQ=255) gCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaagcagaa > 7:257759/1‑149 (MQ=255) gCCCCATCCATGGGGACTCAGCGCTTGACGGGCATCCATGCCCGTAACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaagcagaagcag > 2:31859/1‑149 (MQ=255) ccccATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaagcagaagcag > 7:30217/1‑148 (MQ=255) ccccATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAagcagaagcagc < 8:257759/149‑1 (MQ=255) atGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAagcagaagcagcagaag > 6:146123/1‑146 (MQ=255) tGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCagcagaagcaga < 5:28294/149‑1 (MQ=255) ggggCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAACAATAGCAGAAGCTGAAGCAGAAGCagcagaagcaga > 7:174901/1‑148 (MQ=255) gggCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATa < 1:370874/149‑1 (MQ=255) ccTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATACAg < 5:146123/149‑1 (MQ=255) cTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGACGCAGAGACAg > 8:147726/1‑148 (MQ=255) tCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATACAg < 4:276368/147‑1 (MQ=255) tCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATACAg > 3:276368/1‑147 (MQ=255) tCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATACAGa > 8:264282/1‑148 (MQ=255) gaggtGACCGGCATGGATGCCCCTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTTAAGTCGCAAAATGCGTCGCCGGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCACAAGCAGAACCAGCAGAAGCAGATAAACAAACAg > 6:233285/5‑149 (MQ=18) cTTGACGGGCATCCATGCCCGTCACCTCCGTTCGCAAGCCCTGCGCTCTGCCTTCTGAAGTCGGAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATACAGAAACAgtg < 8:78226/149‑1 (MQ=255) gtGACGGGCATGGATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGCACTACCGCGAGCTTACAAGCAAAAGCAGAAGCCGAAGCAGAAGCAGCAGAAGCAGATACTGAAACAgtgt > 8:135999/2‑149 (MQ=18) tGACGGGCATGGATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATACAGAAACAgtgt > 8:220730/1‑148 (MQ=255) tGACGGGCATGGATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATACAGAAACAgtgt > 8:226448/1‑148 (MQ=255) gACGGGCATGGATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAagcagaagcagc < 8:311114/124‑1 (MQ=255) gACGGGCATGGATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAagcagaagcagc > 7:311114/1‑124 (MQ=255) gACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATACAGAAACAgtgt < 4:193316/147‑1 (MQ=255) gggCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATAc > 8:185141/1‑133 (MQ=255) gggCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATAc < 7:185141/133‑1 (MQ=255) cagccATGCCCGTCACCTCCCTTCGCTAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAACGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATACAGAACCAGTGGTACTGTGc < 5:220566/146‑1 (MQ=21) | AACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGT‑TCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCAGATACAGAAACAGTGTTACTGTGC > NC_002947/4909807‑4910094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |