| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,033,047 | C→G | 7.0% | intergenic (+212/‑198) | PP_4435 → / → PP_4437 | hypothetical protein/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,033,047 | 0 | C | G | 7.0% | 219.0 / 6.5 | 71 | intergenic (+212/‑198) | PP_4435/PP_4437 | hypothetical protein/transposase |
| Reads supporting (aligned to +/- strand): ref base C (31/35); new base G (3/2); total (34/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.41e-01 | |||||||||||
ACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGG > NC_002947/5032901‑5033187 | aCCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCg < 7:125950/149‑1 (MQ=255) cGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCCGGTCGGCGAc > 7:150127/1‑149 (MQ=255) cGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGATCATCGATATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGAc > 5:297022/1‑149 (MQ=255) gATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCCGGTCGGCGACCAGctgtga < 8:150127/149‑5 (MQ=255) cAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGt > 4:3935/1‑149 (MQ=255) aGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTg > 3:49299/1‑149 (MQ=255) aGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTg < 7:214565/149‑1 (MQ=255) aCAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCGCTCAGTGGGGc > 5:145396/1‑149 (MQ=255) aaaCTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCtt < 4:44378/149‑1 (MQ=255) aaCTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTg < 4:49299/149‑1 (MQ=255) tCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATAGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGgag < 7:269263/149‑1 (MQ=255) aTGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGgaga < 4:173403/148‑1 (MQ=255) aTGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCCGGTCGGCGACCAGct > 8:174131/1‑128 (MQ=255) aTGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCCGGTCGGCGACCAGct < 7:174131/128‑1 (MQ=255) cACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCg > 2:136263/1‑149 (MQ=255) cGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGt > 5:282641/1‑128 (MQ=255) cGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGt < 6:282641/128‑1 (MQ=255) gCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTgg > 7:160365/1‑148 (MQ=255) aCATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCgg > 7:243058/1‑107 (MQ=255) aCATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCgg < 8:243058/107‑1 (MQ=255) aCATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGt > 2:297495/1‑117 (MQ=255) aCATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGt < 1:297495/117‑1 (MQ=255) tAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCgg < 5:382658/103‑1 (MQ=255) tAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCg > 8:284344/1‑149 (MQ=255) tAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCg > 5:237582/1‑149 (MQ=255) tAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACGCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCg > 5:112045/1‑149 (MQ=255) tAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATAGCACCTCACAGCTGGTCGCCGACCgg > 6:382658/1‑103 (MQ=255) aaaGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCgg > 5:277654/1‑149 (MQ=255) aaGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCggg < 6:185009/149‑1 (MQ=255) aaGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCggg < 6:356228/149‑1 (MQ=255) tttCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGt > 2:132649/1‑149 (MQ=255) tttCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGt > 2:207273/1‑149 (MQ=255) tCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCGCTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGtt < 6:145396/148‑1 (MQ=255) tCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTg > 1:217591/1‑149 (MQ=255) caacaaGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGtt > 6:354011/1‑147 (MQ=255) caacaaGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGtt < 5:354011/147‑1 (MQ=255) aacaaGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGa < 4:335705/149‑1 (MQ=255) caaGAGCTCATCGCTATCAGGCGCGACGATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTg > 1:209237/1‑127 (MQ=255) caaGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTg < 2:209237/126‑1 (MQ=255) cTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTc < 2:13298/147‑1 (MQ=255) cTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTc > 1:13298/1‑147 (MQ=255) cTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGt < 6:237582/149‑1 (MQ=255) aTCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTgg < 1:207273/149‑1 (MQ=255) gCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTggg > 4:281242/1‑91 (MQ=255) gCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTggg < 3:281242/91‑1 (MQ=255) tCAGGCGCGAC‑ATCCACAAACATCCCGACACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAACCCTGGGTCGTTGGAACGCTCGTTGGACGCtgg > 8:86995/1‑147 (MQ=255) gcgAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGa < 3:3935/149‑1 (MQ=255) ccACAAACATCCCGAAACCGCTTTCGAAGAACCTCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCa < 7:86995/149‑1 (MQ=255) ccACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCAcc > 3:20669/1‑148 (MQ=255) cacaAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCAt > 4:252954/1‑149 (MQ=255) acaAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATc < 6:277654/149‑1 (MQ=255) aCATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTaa < 3:133141/149‑1 (MQ=255) cGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTcc > 5:139949/1‑149 (MQ=255) cGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTcc > 3:91316/1‑149 (MQ=255) gAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATGACCATCGTAAGCGTCCg < 6:297022/149‑1 (MQ=255) aCCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCg < 7:284344/149‑1 (MQ=255) aCCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCg < 1:136263/149‑1 (MQ=255) cGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGaa < 3:252954/149‑1 (MQ=255) aagaaCATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCtt > 4:342599/1‑149 (MQ=255) aagaaCATCGCACCTCACAGCTGGTCGCAGACCGGCTCACTCAGACGGGCTTGGAGATTCACCGTCGACTGGCAAAAACCGGGGTAGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACAATCGTAAGCGTCCGGCGAGCTCACCtt > 7:289490/1‑149 (MQ=255) gCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGAACTcc < 4:91316/149‑1 (MQ=255) gCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGAACTc < 8:160365/148‑1 (MQ=255) gCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGAACTc < 1:132649/148‑1 (MQ=255) cACCTCACAGCTGGTCGCCGACCGGCTCACTCAGGGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCGCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCa < 6:112045/149‑1 (MQ=255) agtgaGCCGGTCGGCGACCAGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCAt > 7:359907/5‑149 (MQ=255) caGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGTGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTaa < 4:20669/149‑1 (MQ=255) aGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGAGTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGc > 1:147872/1‑143 (MQ=255) aGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGaa > 7:336528/1‑136 (MQ=255) aGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGaa < 8:336528/136‑1 (MQ=255) gCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAgg < 3:154843/142‑1 (MQ=255) gCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAgg > 4:154843/1‑142 (MQ=255) ccGACCTGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGcc < 2:46523/85‑1 (MQ=255) ccGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGcc > 1:46523/1‑85 (MQ=255) | ACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGAC‑ATCCACAAACATCCCGAAACCGCTTTCGAAGAACATCGCACCTCACAGCTGGTCGCCGACCGGCTCACTCAGTGGGGCTTGGAGATTCACCGTGGACTGGCAAAAACCGGGGTCGTTGGAACGCTCGTTGGACGCTCGCCAGGAATCACCATCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGG > NC_002947/5032901‑5033187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |