| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,097,424 | G→C | 5.9% | R656R (CGC→CGG) ‡ | acsA‑I ← | acetyl‑CoA synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,097,424 | 0 | G | C | 5.9% | 273.2 / 6.3 | 85 | R656R (CGC→CGG) ‡ | acsA‑I | acetyl‑CoA synthetase |
| Reads supporting (aligned to +/- strand): ref base G (38/42); new base C (3/2); total (41/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.02e-01 | |||||||||||
CAGGGGGTATTGCCGGGAAGGGTTTACGCCGAAGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCTCGATGCCGGCATTGAGG > NC_002947/5097278‑5097571 | cAGGGGGTATAGCCGGGAAGGGTTTACGCCGAAGCCAGGATAATAGCGTTGTGGGTATCGTTCAGGTGATGTCCCACACCCGGGTCAGCCAAGCTCGACATATCGCCCAGAGGGTCGGACTCACCGGTGGAGATCTTGCGCAGGATgcg > 6:323991/1‑149 (MQ=255) tATTGCCGGGAAGGGTTTACGCCGAAGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATg < 1:6814/149‑1 (MQ=255) cttGCCGGGAAGGGTTTACGCCGAAGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGa < 3:128461/148‑1 (MQ=255) gCCGGGAAGGGTTTACGCCGAAGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCATGCGCCGCATCCTGCGCAAGATc < 2:291452/148‑1 (MQ=255) ccGGGAAGGGTTTACGCCGAAGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCtt > 8:187179/1‑149 (MQ=255) aaGGGTTTACGCCGAAGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCg < 1:201168/149‑1 (MQ=255) gggTTTACGCCGAAGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAg > 2:234361/1‑149 (MQ=255) tttACGCCGAAGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCgg > 7:352634/1‑149 (MQ=255) tttACGCCGAAGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCgg < 6:80779/149‑1 (MQ=255) tttACGCCGAACCCAGGTTCATCGCCTTGGGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCgg < 6:33254/149‑1 (MQ=255) ccGAAGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTc < 5:200817/149‑1 (MQ=255) aaGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGc < 5:160498/138‑1 (MQ=255) aaGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGc > 6:160498/1‑138 (MQ=255) aaGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGc < 1:210501/149‑1 (MQ=255) gCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAg > 3:139027/1‑149 (MQ=255) ccAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGc > 4:31569/1‑149 (MQ=255) ccAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCATGCGCCGCATCCTGCGCAAGATc < 6:381356/125‑1 (MQ=255) ccAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCATGCGCCGCATCCTGCGCAAGATc > 5:381356/1‑125 (MQ=255) cAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTCCCACCCCCGGGTCAGCCAAGGTCGAGATATCGCCCCGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGGCTTCGGCAGcc > 3:269317/1‑149 (MQ=255) ccTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCAc > 8:296627/1‑149 (MQ=255) gtgGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTgg < 3:31569/148‑1 (MQ=255) gtgGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTg < 1:234361/147‑1 (MQ=255) tgGGTATCGATCAGGGGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGa < 8:352634/148‑1 (MQ=255) ggTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATc < 7:296627/148‑1 (MQ=255) gTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCtt > 2:367154/1‑122 (MQ=255) gTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCtt < 1:367154/122‑1 (MQ=255) gTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATca > 4:322050/1‑148 (MQ=255) tATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATcaca < 3:188661/149‑1 (MQ=255) aGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGTATCACATCCGGCg < 8:118961/148‑1 (MQ=255) ggTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGaa < 3:333510/149‑1 (MQ=255) ggTGCTGTACCACACCCGGGTCAGCCAAGGTAGAGTTATCGCCCAGGGCGGCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGaa < 4:269317/149‑1 (MQ=255) gTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAg > 8:111019/1‑149 (MQ=255) tGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAg > 1:224830/1‑148 (MQ=255) gTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATc > 5:326863/1‑149 (MQ=255) tACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATgc > 1:119715/1‑77 (MQ=255) tACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATgc < 2:119715/77‑1 (MQ=255) acCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCgg > 5:225027/1‑94 (MQ=255) acCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCgg < 6:225027/94‑1 (MQ=255) ccGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGAtc > 5:34327/1‑149 (MQ=255) ggTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGAGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTcc > 1:251364/1‑149 (MQ=255) gTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCt > 4:230896/1‑149 (MQ=255) tCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCtt < 2:224830/149‑1 (MQ=255) aGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCTGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTgc < 3:230896/149‑1 (MQ=255) ccAAGGTCGAGATATCGCCCAGGGCGTCGTACTCTCCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGACGAAGCAATCGGGCCGATCTCCTTgcgc < 1:215239/149‑1 (MQ=255) ccAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGc < 3:93124/135‑1 (MQ=255) ccAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGc > 4:93124/1‑135 (MQ=255) ccAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTgcg > 1:168842/1‑148 (MQ=255) tCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAg < 6:34327/149‑1 (MQ=255) agaTATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGttc > 8:266845/1‑149 (MQ=255) gaTATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGgcgc < 8:359192/93‑1 (MQ=255) gaTATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGgcgc > 7:359192/1‑93 (MQ=255) atatCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGttctt > 7:311661/1‑149 (MQ=255) atCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTcc > 3:343843/1‑130 (MQ=255) atCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTcc < 4:343843/130‑1 (MQ=255) atCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGttctt > 8:55293/1‑147 (MQ=255) gCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGAt < 8:246522/96‑1 (MQ=255) gCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGAt > 7:246522/1‑96 (MQ=255) cccAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTc > 7:161768/1‑149 (MQ=255) cgggCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAg < 8:188409/148‑1 (MQ=255) cgtcgtACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGgcgc < 7:187179/149‑1 (MQ=255) gtcgtACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCa < 8:161768/149‑1 (MQ=255) gtACTCAGCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTTCCCGAGCGTGTCTTCGGCAGCCCCGGCGCCCTCTGGATCTCATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCCCCGAGTTCTTCAGCTCCAGGCGCAAt < 5:323991/148‑1 (MQ=255) tCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCTGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTc > 5:271749/1‑149 (MQ=255) tCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTc > 3:84437/1‑149 (MQ=255) aCCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGc > 1:16193/1‑149 (MQ=255) aCCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGc > 3:275142/1‑149 (MQ=255) gTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCtt < 4:126878/107‑1 (MQ=255) gTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCtt > 3:126878/1‑107 (MQ=255) ggCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCt > 4:207646/1‑149 (MQ=255) gCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCTc < 8:311661/149‑1 (MQ=255) cGATCTTGCGCAGTATGCGGCGCATGATCTTGCCGGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAAtt < 3:260684/135‑1 (MQ=255) cGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCACCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAAtt > 4:260684/1‑135 (MQ=255) gATCATGCGCCGCATCCTGCGCAAGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCTCGa > 1:292669/1‑149 (MQ=255) gATCATGCGCCGCATCCTGCGCAAGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCTCGa > 4:215688/1‑149 (MQ=255) tCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGttcttc < 4:311945/116‑1 (MQ=255) tCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGttcttc > 3:311945/1‑116 (MQ=255) gcgcAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCt > 1:303661/1‑131 (MQ=255) gcgcAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCt < 2:303661/131‑1 (MQ=255) gcgcAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCTCGATGCCgg > 5:268681/1‑149 (MQ=255) cgcAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAAt > 2:231558/1‑126 (MQ=255) cgcAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAAt < 1:231558/126‑1 (MQ=255) cgcAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCt > 2:228065/1‑139 (MQ=255) cgcAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCt < 1:228065/139‑1 (MQ=255) cgcAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCTCGATGCCgg < 4:139027/148‑1 (MQ=255) gcAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCTCGATGCCGGCa < 6:326863/149‑1 (MQ=255) gATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCTCGATGCCGGCATTGa < 7:266845/149‑1 (MQ=255) aTGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCTCGATGCCGGCATTGAg < 2:16193/149‑1 (MQ=255) tGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCTCGATGCCGGCATTGAgg < 3:322050/149‑1 (MQ=255) | CAGGGGGTATTGCCGGGAAGGGTTTACGCCGAAGCCAGGTTCATCGCCTTGTGGGTATCGATCAGGTGCTGTACCACACCCGGGTCAGCCAAGGTCGAGATATCGCCCAGGGCGTCGTACTCACCGGTGGCGATCTTGCGCAGGATGCGGCGCATGATCTTGCCCGAGCGGGTCTTCGGCAGCCCCGGCGCCCACTGGATCACATCCGGCGAAGCAATCGGGCCGATCTCCTTGCGCACCCAGTTCTTCAGCTCCAGGCGCAATTGCTCGCTGGCCTCGATGCCGGCATTGAGG > NC_002947/5097278‑5097571 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |