| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,102,667 | G→C | 7.0% | A262P (GCC→CCC) ‡ | phhA → | phenylalanine‑4‑hydroxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,102,667 | 0 | G | C | 7.0% | 278.2 / 7.2 | 86 | A262P (GCC→CCC) ‡ | phhA | phenylalanine‑4‑hydroxylase |
| Reads supporting (aligned to +/- strand): ref base G (42/38); new base C (2/4); total (44/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.56e-01 | |||||||||||
CCGCATCGACATTCTGCAACCGGTGTATTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGAAATCCCGGACTG > NC_002947/5102522‑5102812 | ccGCATCGACATTCTGCAACCGGTGTATTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGc < 3:227957/147‑1 (MQ=255) aTCGACATTCTGCAACCGGTGTATTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGc > 2:31613/1‑149 (MQ=255) cTGCAACCGGTGTATTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTCAGGCAGCGACCTTgg < 1:165158/148‑2 (MQ=255) cTGCAACCGGTGTATTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTCAGGCAGCGACCTTgg < 7:131939/148‑2 (MQ=255) tGCAACCGGTGTATTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGcc > 2:93209/1‑148 (MQ=255) gCAACCGGTGTATTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTATGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGa > 7:16228/1‑149 (MQ=255) cAACCGGTGTATTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGcc < 3:90249/146‑1 (MQ=255) cAACCGGTGTATTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGa < 5:176489/148‑1 (MQ=255) gtgtATTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATaacaac > 1:133703/1‑149 (MQ=255) aTTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCg > 3:188394/1‑148 (MQ=255) tttCGTACTGCCGAACATGAAGCGCCTGATCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGaa > 1:23306/1‑149 (MQ=255) ttCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAAc > 7:87787/1‑149 (MQ=255) cGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCAAGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCg > 6:182336/1‑149 (MQ=255) cGTACGGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGcc > 7:339647/1‑132 (MQ=255) cGTACGGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGcc < 8:339647/132‑1 (MQ=255) gTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCAGAGCGACCTTGCCGATAACAACTCGAACCg < 1:31613/148‑1 (MQ=255) aCTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATaacaac < 3:377154/138‑1 (MQ=255) aCTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATaacaac > 4:377154/1‑138 (MQ=255) tGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTCAGGCAGCGACCTTgg < 7:196678/126‑2 (MQ=255) tGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTCAGGCAGCGACCTTgg > 8:196678/1‑125 (MQ=255) ccGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCAATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAaca > 4:264964/1‑149 (MQ=255) gAACATGAAGCGCCTGTTAGACCTGGCCCACGAGGACATAATGGGAATGGTCCATAAAGCCATGCAGATGGGTCTGAATGCACCGAAGTTTACACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAacac > 4:135977/1‑148 (MQ=255) aTGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCAt < 2:23306/149‑1 (MQ=255) cgcCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGc < 1:346553/149‑1 (MQ=255) ccTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCt > 6:13019/1‑149 (MQ=255) cTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCtt < 4:188394/149‑1 (MQ=255) ttCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCAt > 8:192421/1‑137 (MQ=255) ttCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCAt < 7:192421/137‑1 (MQ=255) ttCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGa < 7:32126/148‑1 (MQ=255) cccACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAAt < 5:190234/131‑1 (MQ=255) cccACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAAt > 6:190234/1‑131 (MQ=255) ccACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCg < 4:220208/88‑1 (MQ=255) ccACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCg > 3:220208/1‑88 (MQ=255) gAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAATTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGa < 3:264964/149‑1 (MQ=255) gAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTg < 6:226068/90‑1 (MQ=255) gAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTg > 5:226068/1‑90 (MQ=255) aGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGaa < 5:13019/149‑1 (MQ=255) ggACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAg > 2:264508/1‑149 (MQ=255) catGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAAcc < 6:175037/128‑1 (MQ=255) catGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAAcc > 5:175037/1‑128 (MQ=255) ggCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCgcgc < 8:87787/149‑1 (MQ=255) cATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTc < 2:324549/106‑1 (MQ=255) cATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTc > 1:324549/1‑106 (MQ=255) gTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCTGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCTATgc < 3:200078/149‑1 (MQ=255) tCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATgcg > 7:43900/1‑149 (MQ=255) ccATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATgcgc > 8:176784/1‑149 (MQ=255) cATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACAGCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGcc > 5:382674/1‑149 (MQ=255) tAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCt < 1:219826/131‑1 (MQ=255) tAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCt > 2:219826/1‑131 (MQ=255) tAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCg > 6:368610/1‑148 (MQ=255) aaGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGaaa < 6:382674/149‑1 (MQ=255) aaGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGaaa < 5:368610/149‑1 (MQ=255) ccATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑Gt > 8:110166/1‑148 (MQ=255) ccATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTc < 1:93209/149‑1 (MQ=255) gCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTCAGGCAGCGACCTTg < 7:236260/58‑1 (MQ=21) gCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTCAGGCAGCGACCTTg > 8:236260/1‑58 (MQ=21) gCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACcgac > 7:354723/1‑148 (MQ=255) gggTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGCACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCAccgccg > 7:16912/1‑146 (MQ=255) catgcaCCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATgc < 2:146396/122‑1 (MQ=255) catgcaCCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATgc > 1:146396/1‑122 (MQ=255) atgcaCCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGcc > 4:173043/1‑149 (MQ=255) gcaCCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGTAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGc < 5:141904/104‑1 (MQ=255) gcaCCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGc > 6:141904/1‑104 (MQ=255) aCCGAAGTTTCCACCCAACGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGACGAGCTGGCCGAGc < 8:233011/149‑1 (MQ=255) cGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCt > 4:165012/1‑148 (MQ=255) gAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGc > 4:310000/1‑146 (MQ=255) gAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGc < 3:310000/146‑1 (MQ=255) ttCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCcgc > 6:352429/1‑149 (MQ=255) ccACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATGcgcg > 7:31846/1‑148 (MQ=255) cACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGTAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGa < 5:182336/148‑1 (MQ=255) aCCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGaaa > 3:361782/1‑149 (MQ=255) aCCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGaaa > 2:257261/1‑149 (MQ=255) ccAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGAt < 7:208616/101‑1 (MQ=255) ccAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGAt > 8:208616/1‑101 (MQ=255) ccAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGACTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGAAATc > 6:315891/1‑149 (MQ=255) cAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGAAATcc < 7:110166/149‑1 (MQ=255) cAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGAAATcc > 3:82310/1‑149 (MQ=255) aaGGTCTCTGCCTGAGCGACCTTGCCGATAACAAATCGAACCTGAAAACACCTCATGAATGCCTTGAACGAAGCCAATTGCGAAGCCTTCCTCGCCGATGCGCCGAAA‑GTCACGGACGAAGAGCTGGCCGAGCTGATCAGCGAAATccc < 3:135977/149‑1 (MQ=255) aaGGTCGCTGCCTGAGCGACCTTGCCGATATCTACTCGAACCGGAAAACTCGTCTTGAATGGCTTGAACCAAGCGCATTGCGAAGCCTGCCGGGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTTGCCGAGCTGATCCGCGAAATccc < 8:16912/149‑1 (MQ=255) aaGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGAAATccc > 5:207536/1‑149 (MQ=255) aGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGAAATCCCg < 8:43900/149‑1 (MQ=255) gTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACTAAGAGCTGGCCGAGCTGATCCGCGAAATCCCg < 1:237929/147‑1 (MQ=255) gTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGAAATCCCg > 2:237929/1‑147 (MQ=255) gTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGAAATCCCGGa < 8:16228/149‑1 (MQ=255) tCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAAGGTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGAAATCCCGGa < 1:264508/149‑1 (MQ=255) gCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGAAATCCCGGACTg < 3:173043/149‑1 (MQ=255) | CCGCATCGACATTCTGCAACCGGTGTATTTCGTACTGCCGAACATGAAGCGCCTGTTCGACCTGGCCCACGAGGACATCATGGGCATGGTCCATAAAGCCATGCAGCTGGGTCTGCATGCACCGAAGTTTCCACCCAAGGTCGCTGCCTGAGCGACCTTGCCGATAACAACTCGAACCGGAAAACACCTCATGAATGCCTTGAACCAAGCCCATTGCGAAGCCTGCCGCGCCGATGCGCCGAAA‑GTCACCGACGAAGAGCTGGCCGAGCTGATCCGCGAAATCCCGGACTG > NC_002947/5102522‑5102812 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |