| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,112,355 | C→T | 5.4% | L19L (CTG→CTA) | rluB ← | 23S rRNA pseudouridylate synthase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,112,355 | 0 | C | T | 5.4% | 228.0 / 2.1 | 74 | L19L (CTG→CTA) | rluB | 23S rRNA pseudouridylate synthase B |
| Reads supporting (aligned to +/- strand): ref base C (33/37); new base T (2/2); total (35/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01 | |||||||||||
TGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGG > NC_002947/5112213‑5112496 | tGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCttt > 4:328763/1‑149 (MQ=255) gCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCtttt > 5:75095/1‑149 (MQ=255) cGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCg > 7:250803/1‑149 (MQ=255) gACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCg > 3:310453/1‑148 (MQ=255) gACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCg < 1:128467/148‑1 (MQ=255) gACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCg > 2:67731/1‑148 (MQ=255) gATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCg > 3:364530/1‑149 (MQ=255) gATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCg > 1:252495/1‑149 (MQ=255) gATGGCGTCGTGCAGGGCGACGCGCTGGCCAATGGTGGCCTCGACGCCGTTGCATCCTTGTAGCCCCCCCACGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATg < 1:122244/149‑1 (MQ=255) gtcgtGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGa > 8:292872/1‑149 (MQ=255) cgtGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGAtt < 1:246827/149‑1 (MQ=255) cAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCgg < 8:250803/149‑1 (MQ=255) aGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGt > 6:195510/1‑149 (MQ=255) ggTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGtt < 7:302441/149‑1 (MQ=255) gACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGTAGCTTTTCGCCGGATGGCGGGGTGATTTCGGtttctt > 7:229263/1‑149 (MQ=255) gACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGTAGCTTTTCGCCGGATGGCGGGGTGATTTCGGtttctt > 7:223447/1‑149 (MQ=255) cgcgCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGtttcttt‑c < 3:328763/149‑1 (MQ=255) cgcgCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGtttcttt‑c < 5:48431/149‑1 (MQ=255) cgcTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTTGGTTTCTTT‑CAg < 3:299254/149‑1 (MQ=255) cgcTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATATCGGTTTCTTT‑CAg < 4:50861/149‑1 (MQ=255) gcTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTc > 2:116783/1‑115 (MQ=255) gcTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTc < 1:116783/115‑1 (MQ=255) gcTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGtttcttt‑c > 5:7959/1‑146 (MQ=255) gcTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGtttcttt‑c < 6:7959/146‑1 (MQ=255) gcTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGtttcttt < 8:12843/145‑1 (MQ=255) gcTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGtttcttt > 7:12843/1‑145 (MQ=255) gCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCtt < 7:292872/149‑1 (MQ=255) cAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑c > 1:192080/1‑149 (MQ=255) cAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑c > 2:160925/1‑149 (MQ=255) cAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑c < 8:115991/149‑1 (MQ=255) aGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑ct > 2:253518/1‑148 (MQ=255) gCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑ctcactca > 7:123677/1‑148 (MQ=255) gCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCAt > 3:369011/1‑149 (MQ=255) ccTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑ctca < 8:290849/143‑1 (MQ=255) ccTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑ctca > 7:290849/1‑143 (MQ=255) ccTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATc < 4:289222/149‑1 (MQ=255) tCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTg > 1:217003/1‑149 (MQ=255) gACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTggg < 6:245562/149‑1 (MQ=255) gACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTgg < 5:375610/148‑1 (MQ=255) gCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCAc < 2:252495/149‑1 (MQ=255) gCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCAc > 2:113271/1‑149 (MQ=255) cccGTGG‑A‑CCTGG‑ACGCGCCCCTGCCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCAc < 4:310453/148‑1 (MQ=255) cGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑Ca < 2:241249/123‑1 (MQ=255) cGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑Ca > 1:241249/1‑123 (MQ=255) cTTG‑ATGCGACCCTGGCTTATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCAGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGgt > 5:175456/1‑148 (MQ=255) g‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTa < 6:75095/148‑1 (MQ=255) g‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTa < 4:123225/148‑1 (MQ=255) g‑ATGCGACCCTGGCTGATCCAGGCCTCCACGGCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTTCCAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGgtgt < 1:253518/148‑1 (MQ=255) tGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAgg > 5:292774/1‑148 (MQ=255) gCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGaa > 6:189993/1‑149 (MQ=255) gACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATg < 6:64797/149‑1 (MQ=255) gACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCAACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAAt > 8:139064/1‑148 (MQ=255) aCCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCgg > 5:226755/1‑138 (MQ=255) aCCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCgg < 6:226755/138‑1 (MQ=255) ccTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATGaa > 8:200322/1‑148 (MQ=255) gCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGTAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATGAAAACa < 8:223447/148‑1 (MQ=255) gCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGTAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATGAAAACa < 8:229263/148‑1 (MQ=255) gCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATGAAAAc < 1:160925/147‑1 (MQ=255) ccAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGttt > 5:133792/1‑89 (MQ=255) ccAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGttt < 6:133792/89‑1 (MQ=255) aGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTgg < 5:195510/149‑1 (MQ=255) cTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAAt < 1:109404/129‑1 (MQ=255) cTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGcgac > 2:289266/1‑149 (MQ=255) cTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGCTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAAt > 2:109404/1‑129 (MQ=255) gccgcGAGCCCACGCCAATGCGCGCCAGCGCTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTGTTT‑CAGGTCTGG‑CTCCCTCATCTGGGCACCTGCCGGTGTAGGAATGAAAACAGGTTTCTGGCGCCGCCCGCGCCa > 4:301871/1‑148 (MQ=255) ccgcTAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTGACTCACTCATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCaa < 1:113271/149‑1 (MQ=255) cgAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAgg < 4:369011/149‑1 (MQ=255) cccACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGgt < 4:166528/102‑1 (MQ=255) cccACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGgt > 3:166528/1‑102 (MQ=255) ccACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGGCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTGTTG‑CTCACTCATCTCGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGCCGAACGCGCCAAAAGGCcgcg < 4:364530/149‑1 (MQ=255) ccACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCcgcg < 5:189993/149‑1 (MQ=255) gcgcCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTa > 6:153929/1‑92 (MQ=255) gcgcCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTa < 5:153929/92‑1 (MQ=255) cTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAgg < 2:192080/149‑1 (MQ=255) | TGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTG‑A‑CCTTG‑ATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCGGGGTGATTTCGGTTTCTTT‑CAGGTCTTG‑CTCACTCATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGG > NC_002947/5112213‑5112496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |