| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,117,850 | T→C | 8.8% | H33H (CAT→CAC) | PP_4504 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,117,850 | 0 | T | C | 8.8% | 185.9 / 7.8 | 68 | H33H (CAT→CAC) | PP_4504 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (33/29); new base C (2/4); total (35/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.52e-01 | |||||||||||
CTAGACTGTGCTCATCCGGTAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCACCGACCAGAAAGCCATG > NC_002947/5117703‑5117997 | cTAGACTGTGCTCATCCGGTAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCatcatc < 5:30973/149‑1 (MQ=255) gACTGTGCTCATCCGGTAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATcgcg > 7:76384/1‑149 (MQ=255) tgCTCATCCGGTAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGAt < 7:202626/149‑1 (MQ=255) cTCATCCGGTAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATg < 5:117554/148‑1 (MQ=255) aTCCGGTAATCACCGGCCTATGACAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCACCGCGATGATgcggg < 4:240796/149‑3 (MQ=255) aTCCGGTAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGTATCACCGCGATGATgcggg < 8:273754/149‑3 (MQ=255) cGGTAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCttt < 7:64079/149‑1 (MQ=255) ggTAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCt > 4:14662/1‑146 (MQ=255) ggTAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCt < 3:14662/146‑1 (MQ=255) gTAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTc > 2:303772/1‑148 (MQ=255) tAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATcg < 1:133323/131‑1 (MQ=255) tAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATcg > 2:133323/1‑131 (MQ=255) tAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCACGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTcca < 7:307249/149‑1 (MQ=255) aaTCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTccac > 7:31226/1‑149 (MQ=255) cACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCaa > 4:109508/1‑149 (MQ=255) aaaGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAg < 8:76384/148‑1 (MQ=255) agagaCACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCcgcg > 3:162642/1‑148 (MQ=255) gagaCACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGAt > 6:63323/1‑149 (MQ=255) gaCACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGAt > 3:265129/1‑147 (MQ=255) gaCACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGAt > 6:117059/1‑147 (MQ=255) gaCACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCa < 4:265129/149‑1 (MQ=255) acacCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAg < 3:58669/149‑1 (MQ=255) ccATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAgcgc > 2:117215/1‑149 (MQ=255) ccATGCGCAAGACCCTTATCACCCTGATGTTCGCTACCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAgcgc > 8:56229/1‑149 (MQ=255) aTGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAAc > 8:334838/1‑124 (MQ=255) aTGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAAc < 7:334838/124‑1 (MQ=255) gcAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCcag > 1:353551/1‑146 (MQ=255) ccTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGc > 6:248325/1‑148 (MQ=255) ccTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGc > 6:242882/1‑148 (MQ=255) ccTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGc > 2:155839/1‑148 (MQ=255) cTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCaa < 3:109508/149‑1 (MQ=255) aTCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGc < 1:28005/148‑1 (MQ=255) gCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGa < 5:78291/148‑1 (MQ=255) gCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGAt > 4:111801/1‑149 (MQ=255) cccTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATg > 5:49324/1‑149 (MQ=255) cTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAgcgc > 5:168524/1‑126 (MQ=255) cTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAgcgc < 6:168524/126‑1 (MQ=255) aTGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGa < 8:31226/149‑1 (MQ=255) ttCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGc < 6:49324/148‑1 (MQ=255) gCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAAt < 4:81952/149‑1 (MQ=255) cTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCcagc > 7:342333/1‑120 (MQ=255) cTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCcagc < 8:342333/120‑1 (MQ=255) tGCCGACCGTAGCCATGGCCATGCCAGATGGCGGTCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGCGCCGCGATCAGCGCCAGCAGCGCGGCAAGCTGATGGGCGAGCAAATGCagcagc < 5:315701/147‑1 (MQ=255) tGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCagcagc < 3:111801/147‑1 (MQ=255) aCCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTccacc > 7:57085/1‑76 (MQ=255) aCCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTccacc < 8:57085/76‑1 (MQ=255) tAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACAt > 6:248970/1‑148 (MQ=255) gccatggccatgCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTa < 5:63323/148‑1 (MQ=255) ggccatgCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAgc < 8:45210/89‑1 (MQ=255) ggccatgCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAgc > 7:45210/1‑89 (MQ=255) atgCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCca < 7:201719/89‑1 (MQ=255) atgCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCca > 8:201719/1‑89 (MQ=255) tgCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTAc < 4:162642/149‑1 (MQ=255) aGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGt > 4:158734/1‑149 (MQ=255) gcggcCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAg > 5:80022/1‑149 (MQ=255) gcCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTg > 8:259138/1‑149 (MQ=255) gcgcCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCaa > 8:70371/1‑141 (MQ=255) gcgcCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCaa < 7:70371/141‑1 (MQ=255) gcgcCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCgg < 5:117059/149‑1 (MQ=255) gcCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGc > 5:347783/1‑148 (MQ=255) cACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCAc > 2:260679/1‑149 (MQ=255) acgacgGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCAcc < 1:260679/149‑1 (MQ=255) aaaggcGCATCACCGCGATGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTAc < 2:131958/109‑1 (MQ=255) aaaggcGCATCACCGCGATGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTAc > 1:131958/6‑114 (MQ=255) cccGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCACCGACCAGa < 6:347783/149‑1 (MQ=255) ccGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCACCGACCAGa > 4:292775/1‑148 (MQ=255) ccGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCACCGACCAGa > 1:325722/1‑148 (MQ=255) gCATCACCGCGATGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCACCGACCAGaaa < 8:214482/148‑1 (MQ=255) gCATCACCGCGATGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCACCGACCAGa > 7:214482/1‑146 (MQ=255) atcGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCACCGACCAGAAAGCCATg < 2:325722/149‑1 (MQ=255) tcGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCACCGACCAg < 1:25739/139‑1 (MQ=255) tcGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCACCGACCAg > 2:25739/1‑139 (MQ=255) | CTAGACTGTGCTCATCCGGTAATCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCTGCCGCTTTGCCGACCGTAGCCATGGCCATGCCAGATGGCGGCCCGCGCCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCCACCAACTGGACCTGAGCCGCGATCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAAATGCAGCAGCGCCGCGACATTACCGAGCGCTACCTGTCCAAGCTGCCGGCCACCGACCAGAAAGCCATG > NC_002947/5117703‑5117997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |