| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 432,993 | A→T | 8.3% | intergenic (+18/+29) | PP_0355 → / ← glcB | two‑component system response regulator/malate synthase G |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 432,993 | 0 | A | T | 8.3% | 245.1 / 10.0 | 84 | intergenic (+18/+29) | PP_0355/glcB | two‑component system response regulator/malate synthase G |
| Reads supporting (aligned to +/- strand): ref base A (42/35); new base T (3/4); total (45/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.51e-01 | |||||||||||
GGGCGACACCGATGTGGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGAACGCCACG > NC_002947/432852‑433139 | gggCGACACCGATGTGGAAGAGGCAGTGGATGTGATGCACCTGGGGTTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑t < 7:23360/149‑1 (MQ=255)gggCGACACCGATGTGGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑t > 2:7405/1‑149 (MQ=255)gggCGACACCGATGTGGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑t < 3:329887/149‑1 (MQ=255) cGACACCGATGTGGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTTTTACGG‑Tccc < 8:37123/149‑1 (MQ=255) cacCGATGTTGAAGAGGCAGTGCATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGACGGTGGATATGGCCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATCCGCCAGGGGGACAGTAAAACCG‑TCCCCCt > 4:321068/1‑149 (MQ=255) ccGATGTGGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTgg < 3:236176/149‑1 (MQ=255) cGATGTGGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTTTTACGG‑TCCCCCTGgc < 4:76840/149‑1 (MQ=255) cGATGTGGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTgg > 3:360587/1‑148 (MQ=255) cGATGTGGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTgg > 5:365411/1‑148 (MQ=255) gATGTGGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGgca < 5:102350/149‑1 (MQ=255) tgtgGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑t < 6:160332/137‑1 (MQ=255) tgtgGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑t > 5:160332/1‑137 (MQ=255) gAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTg < 2:212855/140‑1 (MQ=255) gAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGAt > 6:291709/1‑149 (MQ=255) gAAGAGGCAGTGGATGTGATGCACCTGGCGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTg > 1:212855/1‑140 (MQ=255) gagGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGAtgct > 6:13618/1‑149 (MQ=255) gagGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGAtgct > 6:19146/1‑149 (MQ=255) cAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCtt < 5:291709/149‑1 (MQ=255) aGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTa < 4:279325/149‑1 (MQ=255) aGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTa > 6:297470/1‑149 (MQ=255) aGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTa > 8:79600/1‑149 (MQ=255) gTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTa > 1:40745/1‑148 (MQ=255) tgtgATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAAccc < 8:234370/149‑1 (MQ=255) gATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGt > 7:349710/1‑148 (MQ=255) aTGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTTTTACGG‑Tccccc < 1:264867/120‑1 (MQ=255) aTGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTTTTACGG‑Tccccc > 2:264867/1‑120 (MQ=255) aTGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTa > 7:134606/1‑149 (MQ=255) aCCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGcagcag < 1:228643/125‑1 (MQ=255) aCCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGcagcag > 2:228643/1‑125 (MQ=255) cTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGcc < 5:19146/149‑1 (MQ=255) cTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGcc < 5:13618/149‑1 (MQ=255) gtggACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTcg > 8:226765/1‑149 (MQ=255) ggACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGAtgctg > 1:378415/1‑118 (MQ=255) ggACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTcgcg > 1:217448/1‑149 (MQ=255) aaGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTg < 2:217448/148‑1 (MQ=255) aaGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGCCGACGGCGGTg > 3:87466/1‑148 (MQ=255) gTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTAcc < 8:349710/149‑1 (MQ=255) gATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCAACGGCGGTGCAGTACCgg < 7:226765/148‑1 (MQ=255) tGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCgg > 8:293556/1‑149 (MQ=255) gggCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCgg > 5:295068/1‑148 (MQ=255) aaGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACGCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATaa > 1:310065/1‑149 (MQ=255) gCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAAcc < 7:79600/149‑1 (MQ=255) gCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAAcc < 5:297470/149‑1 (MQ=255) tGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGAcgg < 7:124874/121‑1 (MQ=255) tGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGAcgg > 8:124874/1‑121 (MQ=255) tGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGt > 5:94299/1‑149 (MQ=255) ttGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCCGAGCACTACCGGCTCCGTATAACCGTTc > 2:344348/1‑149 (MQ=255) gAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGt < 6:365411/149‑1 (MQ=255) gTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGAcgg < 8:265951/110‑1 (MQ=255) gAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGGATCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGttgcttgc > 1:89500/1‑149 (MQ=255) aaCAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGt < 1:106113/140‑1 (MQ=255) aaCAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGt > 2:106113/1‑140 (MQ=255) aaCAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCa < 1:7405/149‑1 (MQ=255) aaaGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCt < 8:134606/149‑1 (MQ=255) aGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTc > 4:217103/1‑149 (MQ=255) gAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTcc < 4:360587/149‑1 (MQ=255) aCTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTg > 5:330064/1‑104 (MQ=255) aCTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTg < 6:330064/104‑1 (MQ=255) aCTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCa < 6:94299/148‑1 (MQ=255) aCTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCAc < 1:344348/149‑1 (MQ=255) aCTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCAc < 2:89500/149‑1 (MQ=255) cTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCAc > 4:164906/1‑148 (MQ=255) cTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCAc > 7:47551/1‑148 (MQ=255) tGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTa > 3:376679/1‑149 (MQ=255) tGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTa > 7:224881/1‑149 (MQ=255) gAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTAc > 6:133250/1‑149 (MQ=255) gAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCATGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTAc > 4:1442/1‑149 (MQ=255) aaaTTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCa < 2:40745/149‑1 (MQ=255) aaTTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGATGCTTACAACCCCTTACGCGCCTGGAACTCGAGGCGACGGCGCTGCAGTACCGGCTCGGTATAACCGTTCGGGTGCTTGCCACCTTCCACTACCAg > 5:15848/1‑149 (MQ=255) aTTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGta > 6:129602/1‑113 (MQ=255) aTTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGta < 5:129602/113‑1 (MQ=255) gatgatGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCTGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCca < 6:226248/149‑1 (MQ=255) gatgatGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCca < 3:321068/149‑1 (MQ=255) tgctgcCAGGGGGACCGTTTTACGG‑TCCCCCTGGCGGCAGATGCTGC‑TACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAgcc > 6:54955/5‑149 (MQ=39) gcCAGGGGGACCGTAAAACGG‑TACCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAAACGTTCGGTTGCTTGCGACCTTCCACTACCAGTTACACAgccgcc > 6:3549/1‑149 (MQ=255) ggggACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGaa > 2:64906/1‑149 (MQ=255) gggACCGTTTTACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTg < 4:310767/79‑1 (MQ=38) gggACCGTTTTACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTg > 3:310767/1‑79 (MQ=38) gggACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGAAc > 3:278298/1‑149 (MQ=255) gggACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTAAGCGCCTTGAACTAGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTAGCCACCTTCCACTACCACTTCCCCAGACGACTGGAAc > 1:147363/1‑149 (MQ=255) ggACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGAACg < 8:47551/149‑1 (MQ=255) aCCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGAACGcc < 8:224881/149‑1 (MQ=255) cGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGAACGCCAc < 7:293556/149‑1 (MQ=255) gTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGAACGCCACg > 7:114838/1‑149 (MQ=255) | GGGCGACACCGATGTGGAAGAGGCAGTGGATGTGATGCACCTGGGGGTGGTGGACTTCCTGCTCAAGCCGGTGGATCTGGGCAAGCTGTTGGAGCTGGTGAACAAAGAACTGAAAATTGGATGATGCGCCAGGGGGACCGTAAAACGG‑TCCCCCTGGCAGCAGATGCTGCTTACAACCCGTTACGCGCCTTGAACTCGCGGCGACGGCGGTGCAGTACCGGCTCGGTATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGAACGCCACG > NC_002947/432852‑433139 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |