Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,240,569 | A→T | 5.3% | D44V (GAC→GTC) | PP_4618 → | hypothetical protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,240,569 | 0 | A | T | 5.3% | 225.0 / 2.0 | 75 | D44V (GAC→GTC) | PP_4618 | hypothetical protein |
Reads supporting (aligned to +/- strand): ref base A (38/33); new base T (2/2); total (40/35) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 |
TGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCATGCGGCGATGATGGACAAGGTACTG > NC_002947/5240425‑5240717 | tgtgGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTg > 3:86231/1‑149 (MQ=255) agaTACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAgcg > 2:204567/1‑149 (MQ=255) aCCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAgcgcagc < 7:70612/149‑4 (MQ=255) aCCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAgcgc > 2:61179/1‑146 (MQ=255) ccccATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAgcgcagc < 7:75774/148‑4 (MQ=255) cATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCTCGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGAt > 7:201533/1‑147 (MQ=255) tGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCGTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAgc < 2:108695/149‑1 (MQ=255) aaGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAgcg < 3:71745/148‑1 (MQ=255) aaGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAgcg < 3:307508/148‑1 (MQ=255) aCGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGAc > 7:277727/1‑124 (MQ=255) aCGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGAc < 8:277727/124‑1 (MQ=255) tCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGc < 8:201533/149‑1 (MQ=255) cAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGcc > 6:199633/1‑149 (MQ=255) gcctgcctggcctgcctgGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGAt < 4:86231/149‑1 (MQ=255) ctgccgggcctgcctggAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCATCCTGCCGATGc > 7:346210/1‑149 (MQ=255) gcctggcctgcctggAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCtt > 6:373013/1‑149 (MQ=255) cctggcctgcctggAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTc > 2:140720/1‑149 (MQ=255) ctggcctgcctggAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGcgcg > 2:189819/1‑121 (MQ=255) ctggcctgcctggAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGcgcg < 1:189819/121‑1 (MQ=255) gcctgcctggAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCa < 6:384830/147‑1 (MQ=255) gcctgcctggAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCAc < 5:199633/148‑1 (MQ=255) cctggAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGc < 5:92382/148‑1 (MQ=255) ctgctgGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCAGGTCGTGCAgcgca > 4:71092/1‑90 (MQ=255) ctgctgGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCAGGTCGTGCAgcgca < 3:71092/91‑2 (MQ=255) ctgctgGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTgcg > 2:288114/1‑149 (MQ=255) ctgctgGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTgcg > 4:152663/1‑149 (MQ=255) tgctgGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTgcgc > 3:69193/1‑149 (MQ=255) tgctgGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTgcgc > 1:82566/1‑149 (MQ=255) gCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAAGCTACCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGaa > 1:311063/1‑149 (MQ=255) ccGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAAt < 1:140720/149‑1 (MQ=255) tgtgGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTg > 6:152458/1‑149 (MQ=255) tgGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTgg < 1:61179/148‑1 (MQ=255) tgGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTg < 4:69193/147‑1 (MQ=255) gATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCTAACTGGCCCAGCCACTGCTGCGCCAGCTGAATgcgc > 8:15703/1‑143 (MQ=255) gATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCTAACTGGCCCAGCCACTGCTGCGCCAGCTGAATgcgc < 7:15703/143‑1 (MQ=255) tgctgcCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCttt > 8:131900/1‑148 (MQ=255) tgctgcCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCttt > 8:344961/1‑148 (MQ=255) ctgcCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTcag < 5:373013/149‑1 (MQ=255) ctgcCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTcag > 7:126100/1‑149 (MQ=255) ctgcCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTcag < 7:131900/149‑1 (MQ=255) ccGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTcagcag < 5:152458/149‑1 (MQ=255) ccGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTcagc < 1:288114/147‑1 (MQ=255) aGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGAt > 6:237789/1‑149 (MQ=255) cACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGa < 7:344961/149‑1 (MQ=255) cGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTggg > 4:287131/1‑132 (MQ=255) cGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTggg < 3:287131/132‑1 (MQ=255) cGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAat < 3:152663/149‑1 (MQ=255) gACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACtgctgc < 5:117387/112‑1 (MQ=255) gACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACtgctgc > 6:117387/1‑112 (MQ=255) gACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAata > 6:230675/1‑149 (MQ=255) gACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAat > 5:234693/1‑148 (MQ=255) ccTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGATGGGCTTTCAGCAGGATGAATATCa > 8:245074/1‑149 (MQ=255) aGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATg > 1:317278/1‑132 (MQ=255) aGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATg < 2:317278/132‑1 (MQ=255) aGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTgcgc > 8:268259/1‑149 (MQ=255) cGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTcagca < 1:259145/123‑1 (MQ=255) cGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTcagca > 2:259145/1‑123 (MQ=255) cGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGcccc > 7:109836/1‑148 (MQ=255) gCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCActgctg < 1:172703/93‑1 (MQ=255) gCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCActgctg > 2:172703/1‑93 (MQ=255) cTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCAt < 5:237789/149‑1 (MQ=255) tGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCAccc > 2:360553/1‑135 (MQ=255) tGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCAccc < 1:360553/135‑1 (MQ=255) tGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCATg > 4:329076/1‑149 (MQ=255) aGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCa > 2:337288/1‑128 (MQ=255) aGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCa < 1:337288/128‑1 (MQ=255) cTTGCTGCGCTGCACAACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCATGCGGCgat > 4:89426/1‑149 (MQ=255) gctgcgctgcACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCATGCGGCgatgat > 3:143410/1‑149 (MQ=255) ctgcgctgcACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCATGCGGCGatgatg < 6:234693/149‑1 (MQ=255) tgcgctgcACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCATGCGGCGatgatg > 2:161810/1‑148 (MQ=255) cgctgcAGGTCGTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGa < 4:187896/109‑1 (MQ=255) cgctgcAGGTCGTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGa > 3:187896/1‑109 (MQ=255) cgctgcACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCATGCGGCGATGATGGa > 3:153071/1‑148 (MQ=255) cacaACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCATGCGGCGATGATGGACAAgg < 3:89426/148‑1 (MQ=255) cGACCTGCAGCGCGAGATAAGCGCCATCCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCATGCGGCGATGATGGACAAGGTAc < 8:346210/149‑1 (MQ=255) aCCTGCAGCTCGATATAAGAGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCATGCGGCGATGATTGACAAGGTACTg < 2:311063/149‑1 (MQ=255) | TGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGCACTGTGGATTGCTGCCGAGCACGACCCTGGTGTCGAGCCCGCTGCCAGCCTTGCTGCGCTGCACGACCTGCAGCGCGAGATAAGCGCCAACCTGCCGATGCTTCCACTATGCGAACTGGCCCAGCCACTGCTGCGCCAGCTGAATGCGCTGGGCTTTCAGCAGGATGAATATCACCCCTTGCGCCCCCATGCGGCGATGATGGACAAGGTACTG > NC_002947/5240425‑5240717 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |