| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,276,846 | C→T | 10.1% | intergenic (‑150/‑194) | cioA ← / → PP_4652 | cyanide insensitive ubiquinol oxidase subunit I/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,276,846 | 0 | C | T | 10.1% | 187.1 / 9.5 | 69 | intergenic (‑150/‑194) | cioA/PP_4652 | cyanide insensitive ubiquinol oxidase subunit I/membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (28/34); new base T (3/4); total (31/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.24e-01 | |||||||||||
CAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCTTGTTACAAACAGA > NC_002947/5276710‑5276993 | cAGATAATCCGGCGGCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGGTCAATCGTTCCAGATCaat < 8:326284/147‑1 (MQ=255) aGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTACAGGGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCTTTGATCTGGAACGATTGACCCAGATCaat > 1:298356/1‑148 (MQ=255) gATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGGTCAATCGTTCCAGATCaat > 6:288362/1‑145 (MQ=255) gATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGGTCAATCGTTCCAGATCaat < 5:288362/145‑1 (MQ=255) gATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCaatgaat < 2:372903/149‑1 (MQ=255) gATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCaatgaat > 3:133353/1‑149 (MQ=255) aTAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGCCCCAGATCaatgaatg > 3:171056/1‑149 (MQ=255) cGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGa < 5:82514/149‑1 (MQ=255) gTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCa < 7:167889/149‑1 (MQ=255) gTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGGGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCa < 4:80910/149‑1 (MQ=255) tCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCAt < 1:145772/149‑1 (MQ=255) cGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAg > 1:296526/1‑149 (MQ=255) gggCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGt > 2:273267/1‑149 (MQ=255) ggCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTc > 4:193742/1‑149 (MQ=255) gtgGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGaa > 8:133984/1‑149 (MQ=255) gCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAg < 2:11804/134‑1 (MQ=255) gCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAg > 1:11804/1‑134 (MQ=255) gCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATg < 4:133353/148‑1 (MQ=255) cACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCg > 4:116929/1‑149 (MQ=255) cTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCgtg < 3:193742/149‑1 (MQ=255) cccccACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCgtgt < 2:296526/147‑1 (MQ=255) ccccACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTgtggt > 8:88994/1‑149 (MQ=255) ccccACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTgtggt < 4:120905/149‑1 (MQ=255) cccACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGc < 2:66031/108‑1 (MQ=255) cccACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGc > 1:66031/1‑108 (MQ=255) cccACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTgtggtg > 3:112748/1‑149 (MQ=255) cccACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTgtggtg < 1:18144/149‑1 (MQ=255) cccACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTgtggtg < 7:160785/149‑1 (MQ=255) ccACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTgtggtg > 5:116320/1‑148 (MQ=255) cACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGGTCAATCGTTCCAGATCaatgaa < 1:175478/103‑1 (MQ=37) cACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGGTCAATCGTTCCAGATCaatgaa > 2:175478/1‑103 (MQ=37) cACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGa < 2:298356/149‑1 (MQ=255) ggTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGcc < 7:133984/149‑1 (MQ=255) ggTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGcc > 6:189236/1‑149 (MQ=255) gAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGcc < 3:79926/121‑1 (MQ=255) gAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGcc > 4:79926/1‑121 (MQ=255) c‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCt < 7:88994/149‑1 (MQ=255) tgtTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGc < 3:116929/149‑1 (MQ=255) tGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGtgtg > 1:185518/1‑122 (MQ=255) tGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGtgtg < 2:185518/122‑1 (MQ=255) aaTTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGTTTGCCGCGTGACCt > 1:58001/1‑138 (MQ=255) aaTTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGTTTGCCGCGTGACCt < 2:58001/138‑1 (MQ=255) aTTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCAccc > 4:266373/1‑149 (MQ=255) gttctgttcGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGtgtg < 1:178909/115‑1 (MQ=255) gttctgttcGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGtgtg > 2:178909/1‑115 (MQ=255) ctgttcGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCttt < 7:245085/148‑1 (MQ=255) gATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAg > 4:357314/1‑148 (MQ=255) gCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGGCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGt < 4:171056/148‑1 (MQ=255) cAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAg < 5:295997/143‑1 (MQ=255) cAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAg > 6:295997/1‑143 (MQ=255) gggATTCCGGCCAGACTGCCAATTCATTGATCTGGACCGATTGCCCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCACGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGGGGaa < 4:331696/149‑1 (MQ=255) gATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGaaaa < 3:266373/149‑1 (MQ=255) aCGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGa < 5:133012/149‑1 (MQ=255) ggCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGGTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGCCCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAg > 3:19876/1‑148 (MQ=255) ggCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCTCCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGc < 4:112748/149‑1 (MQ=255) aTTCATTGATCTGGGTCAATCGTTCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCaaa > 3:17941/1‑147 (MQ=39) aTTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACa < 3:357314/149‑1 (MQ=255) cATTGATCTGGGTCAATCGTTCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGt < 4:17941/148‑1 (MQ=39) aTTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTg < 1:20628/129‑1 (MQ=255) aTTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTg > 2:20628/1‑129 (MQ=255) gATCTGGAACGATTGCCCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGAGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCg > 3:270098/1‑149 (MQ=255) gATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGCATGGCCCGGTGGGCCGTGTGGAGGATTGCCGCGTGCCATGTTGACTCACCCACGTTTCTTAGCAGTGGAACAGTGCCGACCTGAGCAAACAGTAccc > 3:275090/1‑148 (MQ=255) tCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTGACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCt > 1:310150/1‑149 (MQ=255) ggAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAAc > 1:211681/1‑142 (MQ=255) ggAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAAc < 2:211681/142‑1 (MQ=255) taaCGATTGTCCCAGATCAATGAATGCTAGTTTGCATAGTCGCGAATGGCCCGGTGGGCGGTGTGGTGGATTGCCGCGTGTCCTGTTGCCTGAGGGTCTTTGATTTGCAGTGGAAATGTGCAGACCTGAGCAAAGAGTTACCgg < 4:162037/143‑2 (MQ=255) gAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGc < 5:35448/144‑1 (MQ=255) gAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGc > 3:162037/1‑144 (MQ=255) aCCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCTTGTTACAAACAga < 5:189236/149‑1 (MQ=255) | CAGATAATCCGGCGTCCGGGCTTGTGGCCCCAGTCGCCCACTGCCCCCACTGGGTCGAGTAC‑‑GGCGTGTTGGAATTGTTCTGTTCGATCGCAGGGATTCCGGCCAGACGGCCAATTCATTGATCTGGAACGATTGACCCAGATCAATGAATGCTAGGAAGCATAGTCCCGAATGGCCCGGTGGGCCGTGTGGTGGATTGCCGCGTGACCTGTTGCCTCACCCTCTTTGATTAGCAGTGGAAAAGTGCCGACCTGAGCAAACAGTAACCGCTTGTTACAAACAGA > NC_002947/5276710‑5276993 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |